Variant report

Variant	nsv291226
Chromosome Location	chr4:21833309-21839155
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 146 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:146 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs548071505	chr4:21833349-21833350	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs73256574	chr4:21833385-21833386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs540013623	chr4:21833404-21833405	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs557974899	chr4:21833431-21833432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs575710127	chr4:21833437-21833438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs541114218	chr4:21833440-21833441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs188787441	chr4:21833460-21833461	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs536784496	chr4:21833465-21833466	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs192098171	chr4:21833472-21833473	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs573323814	chr4:21833484-21833485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs553016676	chr4:21833489-21833490	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs139393327	chr4:21833527-21833528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs184408491	chr4:21833530-21833531	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs143300440	chr4:21833572-21833573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs545187121	chr4:21833590-21833591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs574757020	chr4:21833607-21833608	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs563507553	chr4:21833644-21833645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs113814764	chr4:21833652-21833653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs190332614	chr4:21833657-21833658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs2175783	chr4:21833671-21833672	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs550317930	chr4:21833680-21833681	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs181921211	chr4:21833724-21833725	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs187420846	chr4:21833725-21833726	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs374812337	chr4:21833754-21833755	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs547515295	chr4:21833892-21833893	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs566359182	chr4:21833924-21833925	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs2137650	chr4:21833931-21833932	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs369974552	chr4:21833960-21833961	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs534748100	chr4:21833987-21833988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs115990978	chr4:21834020-21834021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs569932525	chr4:21834045-21834046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs530822794	chr4:21834048-21834049	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs536721194	chr4:21834067-21834068	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs555049545	chr4:21834123-21834124	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs575823124	chr4:21834158-21834159	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs534605940	chr4:21834185-21834186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs4470613	chr4:21834189-21834190	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs577850925	chr4:21834202-21834203	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs61181954	chr4:21834208-21834209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs201156989	chr4:21834217-21834218	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs200150594	chr4:21834228-21834229	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs5856673	chr4:21834232-21834233	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs563442511	chr4:21834248-21834249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs575510291	chr4:21834279-21834280	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs553361017	chr4:21834291-21834292	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs4431214	chr4:21834303-21834304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs360690	chr4:21834320-21834321	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs201476305	chr4:21834324-21834325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs578147799	chr4:21834347-21834348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs13127792	chr4:21834358-21834359	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
Oral squamous cell carcinoma	17134496	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Cancer	21183584	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Breast cancer	17133270	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21829676	CNVD
Melanoma	22183965	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Olfactory neuroblastoma	18408657	CNVD
Burkitt''s lymphoma	20823134	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	16774939	CNVD
Cancer	22183965	CNVD
Gastric cancer	16891809	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:21832200-21837200	Weak transcription	HUVEC	blood vessel
2	chr4:21837000-21837800	Enhancers	Muscle Satellite Cultured Cells	--
3	chr4:21837200-21837800	Enhancers	HUVEC	blood vessel

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