Variant report

Variant	nsv317
Chromosome Location	chr11:47995903-48007266
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:715)
CpG islands
(count:733)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:715 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr11:48005044-48005362	K562	blood:	n/a	n/a
2	ATF2	chr11:47995884-47996433	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr11:47995987-47996296	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr11:48001120-48001869	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr11:48005088-48005498	K562	blood:	n/a	n/a
6	BHLHE40	chr11:48003311-48003830	GM12878	blood:	n/a	n/a
7	BHLHE40	chr11:47995691-47995988	K562	blood:	n/a	n/a
8	BHLHE40	chr11:48002688-48003004	K562	blood:	n/a	n/a
9	BHLHE40	chr11:48002877-48002924	GM12878	blood:	n/a	n/a
10	BHLHE40	chr11:48002001-48002473	K562	blood:	n/a	chr11:48002237-48002253 chr11:48002138-48002154 chr11:48002104-48002120 chr11:48002375-48002391 chr11:48002146-48002162 chr11:48002240-48002256
11	BHLHE40	chr11:48002116-48002526	GM12878	blood:	n/a	chr11:48002237-48002253 chr11:48002138-48002154 chr11:48002375-48002391 chr11:48002146-48002162 chr11:48002240-48002256
12	BHLHE40	chr11:48003267-48003524	K562	blood:	n/a	n/a
13	BHLHE40	chr11:48005287-48005927	K562	blood:	n/a	n/a
14	BHLHE40	chr11:48000908-48001210	K562	blood:	n/a	n/a
15	CCNT2	chr11:48001687-48003494	K562	blood:	n/a	chr11:48002660-48002669 chr11:48002062-48002071 chr11:48003223-48003232
16	CEBPB	chr11:47995614-47996300	IMR90	lung:	n/a	n/a
17	CEBPB	chr11:47995598-47996466	ECC-1	luminal epithelium:	n/a	n/a
18	CEBPB	chr11:48003725-48003781	K562	blood:	n/a	n/a
19	CEBPB	chr11:47999270-47999600	IMR90	lung:	n/a	n/a
20	CEBPB	chr11:47999182-47999524	A549	lung:	n/a	n/a
21	CEBPB	chr11:47999243-47999573	HepG2	liver:	n/a	n/a
22	CEBPB	chr11:47999280-47999578	A549	lung:	n/a	n/a
23	CEBPB	chr11:47995707-47996378	ECC-1	luminal epithelium:	n/a	n/a
24	CEBPB	chr11:48004185-48004576	Hela-S3	cervix:	n/a	chr11:48004464-48004477
25	CEBPB	chr11:47999080-47999700	A549	lung:	n/a	n/a
26	CEBPB	chr11:48002055-48002351	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr11:48002707-48003360	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr11:47999243-47999568	Hela-S3	cervix:	n/a	n/a
29	CHD1	chr11:48002670-48003635	IMR90	lung:	n/a	n/a
30	CHD1	chr11:48002832-48002961	GM12878	blood:	n/a	n/a
31	CHD1	chr11:48002971-48003019	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD1	chr11:48002367-48002442	GM12878	blood:	n/a	n/a
33	CHD2	chr11:48000967-48001044	HepG2	liver:	n/a	n/a
34	CHD2	chr11:48002116-48002201	K562	blood:	n/a	n/a
35	CHD2	chr11:48001553-48003496	Hela-S3	cervix:	n/a	chr11:48001912-48001922
36	CREB1	chr11:47995682-47995939	A549	lung:	n/a	n/a
37	CREB1	chr11:48001883-48002477	A549	lung:	n/a	n/a
38	CTBP2	chr11:48000968-48001868	H1-hESC	embryonic stem cell:	n/a	n/a
39	CTBP2	chr11:47996085-47996315	H1-hESC	embryonic stem cell:	n/a	n/a
40	CTCF	chr11:47998420-47998570	HCT-116	colon:	n/a	n/a
41	CTCF	chr11:48000900-48001050	HAc	cerebellar:	n/a	n/a
42	CTCF	chr11:47996160-47996310	AG04450	lung:	n/a	chr11:47996263-47996276 chr11:47996264-47996274 chr11:47996267-47996276
43	CTCF	chr11:47996180-47996330	HMF	breast:	n/a	chr11:47996263-47996276 chr11:47996264-47996274 chr11:47996267-47996276
44	CTCF	chr11:48002820-48002970	AG04449	skin:	n/a	n/a
45	CTCF	chr11:48001700-48001850	Caco-2	colon:	n/a	n/a
46	CTCF	chr11:48002840-48002990	GM12875	blood:	n/a	n/a
47	CTCF	chr11:47998540-47998690	GM12874	blood:	n/a	n/a
48	CTCF	chr11:47996180-47996330	HCPEpiC	choroid plexus:	n/a	chr11:47996263-47996276 chr11:47996264-47996274 chr11:47996267-47996276
49	CTCF	chr11:48002991-48002995	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr11:47996265-47996286	ProgFib	skin:	n/a	chr11:47996267-47996276

(count:733 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:48002566-48002616	NT2-D1	testis:	n/a
2	chr11:48002566-48002616	NT2-D1	testis:	n/a
3	chr11:47997690-47997740	NHDF-neo	bronchial:	n/a
4	chr11:47997690-47997740	GM12891	blood:	n/a
5	chr11:48003065-48003115	GM06990	blood:	n/a
6	chr11:48001835-48001885	HRCEpiC	kidney:	n/a
7	chr11:48001761-48001811	NH-A	brain:	n/a
8	chr11:47997690-47997740	PrEC	prostate:	n/a
9	chr11:48006811-48006861	K562	blood:	n/a
10	chr11:48001761-48001811	GM12878	blood:	n/a
11	chr11:48003169-48003219	HCT-116	colon:	n/a
12	chr11:48003065-48003115	NH-A	brain:	n/a
13	chr11:48002566-48002616	H1-hESC	embryonic stem cell:	embryo
14	chr11:48002566-48002616	RPTEC	kidney:	n/a
15	chr11:48002566-48002616	Jurkat	blood:	n/a
16	chr11:48002566-48002616	NHDF-neo	bronchial:	n/a
17	chr11:48001940-48001990	PANC-1	pancreas:	n/a
18	chr11:48006811-48006861	RPTEC	kidney:	n/a
19	chr11:48001761-48001811	HNPCEpiC	eye:	n/a
20	chr11:48001954-48002004	BJ	skin:	n/a
21	chr11:48000611-48000661	SKMC	muscle:	n/a
22	chr11:48003065-48003115	HCF	heart:	n/a
23	chr11:48000611-48000661	T-47D	breast:	n/a
24	chr11:47995865-47995915	HRCEpiC	kidney:	n/a
25	chr11:48003169-48003219	GM19239	blood:	n/a
26	chr11:48003169-48003219	HCF	heart:	n/a
27	chr11:48003169-48003219	HRCEpiC	kidney:	n/a
28	chr11:47995865-47995915	SK-N-SH_RA	brain:	n/a
29	chr11:48003065-48003115	Caco-2	colon:	n/a
30	chr11:47997690-47997740	AG10803	skin:	n/a
31	chr11:47995865-47995915	HCT-116	colon:	n/a
32	chr11:48001940-48001990	GM12891	blood:	n/a
33	chr11:48001954-48002004	HCF	heart:	n/a
34	chr11:48006811-48006861	SK-N-SH	brain:	n/a
35	chr11:47997690-47997740	ProgFib	skin:	n/a
36	chr11:48003065-48003115	HCPEpiC	choroid plexus:	n/a
37	chr11:48002566-48002616	BE2_C	brain:	n/a
38	chr11:48003169-48003219	AG04449	skin:	fetal
39	chr11:48001940-48001990	SAEC	small airway:	n/a
40	chr11:48000611-48000661	K562	blood:	n/a
41	chr11:48001669-48001719	PFSK-1	brain:	n/a
42	chr11:48006811-48006861	HepG2	liver:	n/a
43	chr11:48002566-48002616	HMEC	breast:	n/a
44	chr11:48001940-48001990	LNCaP	prostate:	n/a
45	chr11:47995865-47995915	HIPEpiC	eye:	n/a
46	chr11:48001669-48001719	SK-N-MC	brain:	n/a
47	chr11:48001954-48002004	T-47D	breast:	n/a
48	chr11:48001954-48002004	IMR90	lung:	fetal
49	chr11:47995865-47995915	AG10803	skin:	n/a
50	chr11:48006811-48006861	NHBE	bronchial:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:47993972..47999221-chr11:48000961..48004940,8	MCF-7	breast:
2	chr11:48005352..48007583-chr11:48007983..48010458,2	MCF-7	breast:
3	chr11:48001622..48003248-chr11:48003667..48005492,2	MCF-7	breast:
4	chr11:48003107..48006285-chr11:48013442..48016525,3	MCF-7	breast:
5	chr11:47998626..48001544-chr11:48011540..48013257,2	MCF-7	breast:
6	chr11:48000640..48001500-chr11:48131020..48132149,3	MCF-7	breast:
7	chr11:48002531..48005255-chr11:48006333..48009338,3	K562	blood:
8	chr11:47994952..47996507-chr11:48001378..48004239,2	K562	blood:
9	chr11:48002531..48005255-chr11:48006333..48009338,3	K562	blood:
10	chr11:48002635..48003533-chr11:48130431..48131591,3	MCF-7	breast:
11	chr11:47994688..47998306-chr11:48000477..48003009,4	MCF-7	breast:
12	chr11:47955684..47956212-chr11:48000981..48001494,2	MCF-7	breast:

No data

Variant related genes	Relation type
PTPRJ	TF binding region
PTPRJ	CpG island
ENSG00000149177	chromatin interactions

Extended variants
information (count: 370 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:370 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs577281091	chr11:47995928-47995929	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs536760492	chr11:47995956-47995957	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs113198745	chr11:47996006-47996007	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs1729290	chr11:47996131-47996132	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs556887064	chr11:47996136-47996137	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs573531725	chr11:47996140-47996141	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs56041260	chr11:47996159-47996160	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs72899717	chr11:47996233-47996234	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs553693015	chr11:47996239-47996240	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs113381480	chr11:47996284-47996285	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs145113258	chr11:47996286-47996287	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs371835324	chr11:47996287-47996288	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs35439878	chr11:47996291-47996292	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs573625775	chr11:47996296-47996297	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs187211044	chr11:47996318-47996319	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs191925001	chr11:47996356-47996357	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs554596669	chr11:47996382-47996383	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs530999416	chr11:47996525-47996526	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs147914224	chr11:47996559-47996560	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs561467033	chr11:47996599-47996600	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs530033506	chr11:47996670-47996671	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs547021761	chr11:47996764-47996765	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs565594626	chr11:47996796-47996797	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs12275829	chr11:47996843-47996844	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs540112977	chr11:47996844-47996845	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs183429796	chr11:47996881-47996882	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs537276825	chr11:47996899-47996900	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs12275893	chr11:47996930-47996931	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs112728808	chr11:47996968-47996969	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs150989814	chr11:47996969-47996970	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs188758585	chr11:47996974-47996975	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs559718386	chr11:47996990-47996991	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs531950795	chr11:47996993-47996994	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs540369964	chr11:47997011-47997012	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs35742733	chr11:47997018-47997019	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs193065704	chr11:47997070-47997071	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs185740095	chr11:47997092-47997093	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs140812223	chr11:47997093-47997094	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs188035439	chr11:47997121-47997122	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs544831719	chr11:47997202-47997203	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs112189742	chr11:47997205-47997206	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs545737786	chr11:47997217-47997218	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs540195996	chr11:47997225-47997226	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs183833680	chr11:47997242-47997243	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs528340496	chr11:47997258-47997259	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs551238209	chr11:47997275-47997276	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs376220296	chr11:47997396-47997397	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs367596591	chr11:47997468-47997469	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs79934673	chr11:47997475-47997476	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs530607300	chr11:47997557-47997558	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Parathyroid adenoma	22454399	CNVD
Medulloblastoma	21979893	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17603634	CNVD
Chordoma	18071362	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
small cell lung cancer	20016488	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Myelofibrosis	22110671	CNVD
Melanoma	18172304	CNVD
Intracranial ependymoma	16609018	CNVD
Myxofibrosarcoma	16751306	CNVD
Potocki-Shaffer syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Breast cancer	16608533	CNVD
Hirschsprung''s Disease	21712996	CNVD
Follicular lymphoma	20505157	CNVD
Colorectal cancer	21128281	CNVD
Breast cancer	20409316	CNVD
Neurocytoma	17123091	CNVD
Central neurocytomas	17123091	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Mantle cell lymphoma	19029149	CNVD
Glioblastoma multiforme	21138945	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22581003	CNVD
Glioblastoma multiforme	21390271	CNVD
Acute lymphoblastic leukemia	20699438	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21990379	CNVD

Chromatin state (count:924 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47993400-48001400	Weak transcription	Right Atrium	heart
2	chr11:47994400-47997400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:47994600-47996800	Enhancers	Muscle Satellite Cultured Cells	--
4	chr11:47994600-47996800	Enhancers	HSMM	muscle
5	chr11:47994800-47996200	Enhancers	Osteobl	bone
6	chr11:47994800-47996400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:47994800-47996600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr11:47994800-47996600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr11:47994800-47996600	Enhancers	NHLF	lung
10	chr11:47994800-47996800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr11:47994800-47997000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr11:47994800-47997000	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr11:47994800-47997200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr11:47994800-47997200	Enhancers	Primary B cells from cord blood	blood
15	chr11:47994800-47997200	Enhancers	Cortex derived primary cultured neurospheres	brain
16	chr11:47994800-47997400	Enhancers	iPS-20b Cell Line	embryonic stem cell
17	chr11:47995000-47996200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr11:47995000-47996600	Enhancers	H1 Cell Line	embryonic stem cell
19	chr11:47995000-47996600	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr11:47995000-47996800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr11:47995000-47996800	Enhancers	NHDF-Ad	bronchial
22	chr11:47995000-47997200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr11:47995000-47997400	Enhancers	Primary monocytes fromperipheralblood	blood
24	chr11:47995000-47997800	Enhancers	Placenta	Placenta
25	chr11:47995200-47996000	Enhancers	A549	lung
26	chr11:47995200-47996200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr11:47995200-47996200	Enhancers	Brain Substantia Nigra	brain
28	chr11:47995200-47996600	Enhancers	ES-I3 Cell Line	embryonic stem cell
29	chr11:47995200-47996600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr11:47995200-47996600	Enhancers	HSMMtube	muscle
31	chr11:47995200-47996800	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr11:47995200-47996800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr11:47995200-47997000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr11:47995200-47997400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr11:47995200-47997400	Enhancers	Primary B cells from peripheral blood	blood
36	chr11:47995200-47997400	Enhancers	Monocytes-CD14+_RO01746	blood
37	chr11:47995400-47996000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr11:47995400-47996200	Enhancers	NHEK	skin
39	chr11:47995400-47996400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:47995400-47996400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
41	chr11:47995400-47996400	Enhancers	Brain Hippocampus Middle	brain
42	chr11:47995400-47996400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
43	chr11:47995400-47996400	Enhancers	Fetal Lung	lung
44	chr11:47995400-47996400	Enhancers	Stomach Mucosa	stomach
45	chr11:47995400-47996600	Enhancers	ES-WA7 Cell Line	embryonic stem cell
46	chr11:47995400-47996600	Enhancers	H9 Cell Line	embryonic stem cell
47	chr11:47995400-47996600	Enhancers	iPS-15b Cell Line	embryonic stem cell
48	chr11:47995400-47996600	Enhancers	Primary hematopoietic stem cells short term culture	blood
49	chr11:47995400-47996600	Enhancers	Adipose Nuclei	Adipose
50	chr11:47995400-47996600	Enhancers	Duodenum Smooth Muscle	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links