The 2.0 version of rSNPBase

Variant report

Variant nsv320436
Chromosome Location chr5:60202585-60202588
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:60167800-60228200 Weak transcription Psoas Muscle Psoas
2 chr5:60175800-60239400 Weak transcription NHEK skin
3 chr5:60176400-60220400 Weak transcription Esophagus oesophagus
4 chr5:60177200-60239600 Weak transcription HSMMtube muscle
5 chr5:60177400-60232800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr5:60177600-60213000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr5:60178000-60214200 Weak transcription Fetal Kidney kidney
8 chr5:60181000-60218800 Weak transcription Primary T killer naive cells fromperipheralblood blood
9 chr5:60181600-60230800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr5:60181800-60211000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr5:60182000-60213000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr5:60182400-60212200 Weak transcription NHDF-Ad bronchial
13 chr5:60183400-60213800 Weak transcription GM12878-XiMat blood
14 chr5:60183400-60228000 Weak transcription Small Intestine intestine
15 chr5:60185600-60221200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr5:60186200-60212800 Weak transcription Placenta Placenta
17 chr5:60187400-60212000 Weak transcription Muscle Satellite Cultured Cells --
18 chr5:60187400-60212600 Weak transcription HepG2 liver
19 chr5:60187600-60223800 Weak transcription HUVEC blood vessel
20 chr5:60187600-60239600 Weak transcription Rectal Smooth Muscle rectum
21 chr5:60187800-60239600 Weak transcription Brain Angular Gyrus brain
22 chr5:60188000-60216200 Weak transcription Hela-S3 cervix
23 chr5:60188000-60223400 Weak transcription Primary B cells from peripheral blood blood
24 chr5:60188600-60215600 Weak transcription Fetal Heart heart
25 chr5:60189400-60240000 Weak transcription Spleen Spleen
26 chr5:60189600-60211400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr5:60189600-60211400 Weak transcription Fetal Muscle Trunk muscle
28 chr5:60189600-60213800 Weak transcription Aorta Aorta
29 chr5:60189600-60217200 Weak transcription A549 lung
30 chr5:60189600-60224000 Weak transcription Osteobl bone
31 chr5:60189600-60239600 Weak transcription Right Ventricle heart
32 chr5:60189600-60240000 Weak transcription Pancreas Pancrea
33 chr5:60189800-60213000 Weak transcription Fetal Brain Male brain
34 chr5:60189800-60223600 Weak transcription Stomach Smooth Muscle stomach
35 chr5:60189800-60225000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr5:60189800-60225800 Weak transcription Fetal Brain Female brain
37 chr5:60190200-60224000 Weak transcription Brain Germinal Matrix brain
38 chr5:60191000-60227200 Weak transcription Fetal Intestine Small intestine
39 chr5:60191000-60232800 Weak transcription Fetal Stomach stomach
40 chr5:60191600-60213000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:60191800-60204600 Weak transcription HUES6 Cell Line embryonic stem cell
42 chr5:60191800-60212200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr5:60191800-60213000 Weak transcription NH-A brain
44 chr5:60193000-60211600 Weak transcription Fetal Thymus thymus
45 chr5:60193000-60212800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr5:60193200-60205200 Weak transcription Fetal Intestine Large intestine
47 chr5:60193200-60209800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr5:60193200-60210400 Weak transcription Cortex derived primary cultured neurospheres brain
49 chr5:60193200-60211000 Weak transcription Duodenum Mucosa Duodenum
50 chr5:60193200-60212800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015