Variant report

Variant nsv3253
Chromosome Location chr20:1547092-1603832
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:346 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:1537000-1551600 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr20:1543200-1550400 Weak transcription Thymus Thymus
3 chr20:1543600-1548600 Genic enhancers Primary monocytes fromperipheralblood blood
4 chr20:1543800-1568000 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr20:1544600-1569000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr20:1544800-1548200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
7 chr20:1545000-1548000 Strong transcription Primary neutrophils fromperipheralblood blood
8 chr20:1545200-1547400 Strong transcription Primary T cells from cord blood blood
9 chr20:1545800-1549400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr20:1546200-1547800 Strong transcription Monocytes-CD14+_RO01746 blood
11 chr20:1546600-1551200 Enhancers Hela-S3 cervix
12 chr20:1546600-1551400 Weak transcription Spleen Spleen
13 chr20:1546800-1550800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr20:1546800-1551000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr20:1547000-1547800 Enhancers NHEK skin
16 chr20:1547000-1550800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr20:1547000-1551000 Enhancers HMEC breast
18 chr20:1547200-1549000 Enhancers NH-A brain
19 chr20:1547200-1549400 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr20:1547200-1551000 Enhancers HUVEC blood vessel
21 chr20:1547400-1548000 Enhancers A549 lung
22 chr20:1547400-1548800 Weak transcription Primary T cells from cord blood blood
23 chr20:1547400-1549000 Enhancers Osteobl bone
24 chr20:1547800-1548000 Genic enhancers Monocytes-CD14+_RO01746 blood
25 chr20:1547800-1548200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr20:1547800-1548600 Enhancers HUES64 Cell Line embryonic stem cell
27 chr20:1547800-1548800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr20:1547800-1548800 Flanking Active TSS NHEK skin
29 chr20:1547800-1550200 Enhancers NHDF-Ad bronchial
30 chr20:1548000-1548200 Active TSS A549 lung
31 chr20:1548000-1548400 Enhancers HUES6 Cell Line embryonic stem cell
32 chr20:1548000-1548400 Genic enhancers Primary neutrophils fromperipheralblood blood
33 chr20:1548000-1548400 Enhancers Esophagus oesophagus
34 chr20:1548000-1548400 Enhancers NHLF lung
35 chr20:1548000-1548800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr20:1548000-1549000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr20:1548000-1549000 Enhancers Muscle Satellite Cultured Cells --
38 chr20:1548000-1549000 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
39 chr20:1548200-1548600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
40 chr20:1548200-1548600 Flanking Active TSS A549 lung
41 chr20:1548200-1551400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
42 chr20:1548400-1548600 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr20:1548400-1548800 Weak transcription Esophagus oesophagus
44 chr20:1548400-1550200 Enhancers Primary neutrophils fromperipheralblood blood
45 chr20:1548600-1549000 Enhancers Primary hematopoietic stem cells blood
46 chr20:1548600-1550600 Enhancers Primary monocytes fromperipheralblood blood
47 chr20:1548600-1550600 Enhancers A549 lung
48 chr20:1548800-1549000 Enhancers Esophagus oesophagus
49 chr20:1548800-1551000 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr20:1548800-1551000 Enhancers NHEK skin

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