Variant report

Variant nsv328038
Chromosome Location chr5:52772280-52777292
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:557 , 50 per page) page: 1 2 3 4 5 6 7 ... 12
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:52761600-52774400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr5:52766800-52772800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:52766800-52773000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr5:52766800-52774400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr5:52768000-52774200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr5:52768600-52772800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr5:52768600-52774000 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr5:52769200-52774000 Enhancers HepG2 liver
9 chr5:52769800-52772800 Weak transcription HMEC breast
10 chr5:52769800-52774000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr5:52770000-52774000 Weak transcription NHEK skin
12 chr5:52770800-52774200 Enhancers Liver Liver
13 chr5:52772000-52773000 Enhancers Brain Anterior Caudate brain
14 chr5:52772000-52773400 Enhancers HSMM muscle
15 chr5:52772200-52774000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:52772400-52772600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:52772400-52773200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr5:52772600-52772800 Enhancers Brain Germinal Matrix brain
19 chr5:52772600-52773400 Enhancers Brain Substantia Nigra brain
20 chr5:52772600-52774400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr5:52772800-52773000 Enhancers iPS-20b Cell Line embryonic stem cell
22 chr5:52772800-52773000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr5:52772800-52773200 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:52772800-52773200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr5:52772800-52773200 Enhancers H9 Cell Line embryonic stem cell
26 chr5:52772800-52773200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
27 chr5:52772800-52773200 Enhancers Hela-S3 cervix
28 chr5:52772800-52773200 Enhancers HSMMtube muscle
29 chr5:52772800-52773400 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr5:52772800-52773400 Enhancers Brain Cingulate Gyrus brain
31 chr5:52772800-52773400 Enhancers Brain Hippocampus Middle brain
32 chr5:52772800-52773400 Enhancers HMEC breast
33 chr5:52772800-52774400 Weak transcription Brain Germinal Matrix brain
34 chr5:52773000-52773200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr5:52773000-52773200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:52773000-52773200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr5:52773000-52773200 Flanking Bivalent TSS/Enh Brain Angular Gyrus brain
38 chr5:52773000-52774000 Enhancers HUES6 Cell Line embryonic stem cell
39 chr5:52773000-52774000 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr5:52773000-52774000 Weak transcription iPS-20b Cell Line embryonic stem cell
41 chr5:52773000-52774000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr5:52773000-52774000 Weak transcription Brain Anterior Caudate brain
43 chr5:52773200-52774000 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr5:52773200-52774000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr5:52773200-52774000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:52773200-52774000 Weak transcription Hela-S3 cervix
47 chr5:52773200-52774000 Weak transcription HSMMtube muscle
48 chr5:52773200-52774200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr5:52773200-52774400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr5:52773200-52774400 Weak transcription H9 Cell Line embryonic stem cell

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