The 2.0 version of rSNPBase

Variant report

Variant nsv348526
Chromosome Location chr6:38312212-38312225
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:38285000-38327800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:38291400-38317600 Weak transcription Rectal Smooth Muscle rectum
3 chr6:38299200-38313400 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr6:38299800-38317800 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr6:38301600-38313400 Weak transcription Psoas Muscle Psoas
6 chr6:38301600-38315800 Weak transcription Brain Hippocampus Middle brain
7 chr6:38301600-38324600 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr6:38301800-38313400 Weak transcription Aorta Aorta
9 chr6:38302000-38315800 Weak transcription Primary T cells fromperipheralblood blood
10 chr6:38302000-38318200 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr6:38302200-38315800 Weak transcription Brain Substantia Nigra brain
12 chr6:38304600-38323000 Weak transcription Ovary ovary
13 chr6:38305000-38317600 Weak transcription Stomach Smooth Muscle stomach
14 chr6:38305000-38318000 Weak transcription Colon Smooth Muscle Colon
15 chr6:38305800-38315200 Weak transcription Primary T helper cells fromperipheralblood blood
16 chr6:38306000-38313400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr6:38306000-38315800 Weak transcription Brain Cingulate Gyrus brain
18 chr6:38306200-38314200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr6:38306200-38314400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:38306400-38313000 Weak transcription NHDF-Ad bronchial
21 chr6:38306400-38313600 Weak transcription HSMMtube muscle
22 chr6:38306400-38314200 Weak transcription HSMM muscle
23 chr6:38306800-38313400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:38306800-38314400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:38307200-38314800 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr6:38307600-38318400 Weak transcription Fetal Intestine Small intestine
27 chr6:38307800-38315800 Weak transcription Brain Anterior Caudate brain
28 chr6:38308000-38314600 Weak transcription Spleen Spleen
29 chr6:38309000-38313400 Weak transcription Fetal Muscle Leg muscle
30 chr6:38309000-38318800 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr6:38309000-38319000 Weak transcription Esophagus oesophagus
32 chr6:38309200-38313400 Weak transcription Liver Liver
33 chr6:38309400-38313200 Strong transcription Primary B cells from peripheral blood blood
34 chr6:38309600-38314000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr6:38309800-38313600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr6:38309800-38323400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr6:38310400-38313800 Strong transcription Primary T cells from cord blood blood
38 chr6:38310400-38314200 Weak transcription HUVEC blood vessel
39 chr6:38310600-38314000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr6:38310600-38314400 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr6:38310800-38326000 Weak transcription Lung lung
42 chr6:38311000-38312600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr6:38311200-38314200 Weak transcription Gastric stomach
44 chr6:38311200-38317600 Weak transcription Adipose Nuclei Adipose
45 chr6:38311400-38319000 Weak transcription Left Ventricle heart
46 chr6:38311400-38322000 Weak transcription Primary B cells from cord blood blood
47 chr6:38312000-38326600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015