Variant report

Variant	nsv349362
Chromosome Location	chr6:141283973-141286538
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 119 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:119 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12191326	chr6:141283982-141283983	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs9968793	chr6:141283996-141283997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs549623989	chr6:141284008-141284009	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs187263947	chr6:141284088-141284089	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs538220717	chr6:141284148-141284149	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs549800919	chr6:141284177-141284178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs9968947	chr6:141284181-141284182	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs538702568	chr6:141284192-141284193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs35610266	chr6:141284205-141284206	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs369100210	chr6:141284247-141284248	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs140494233	chr6:141284253-141284254	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs377331951	chr6:141284265-141284266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs150413174	chr6:141284317-141284318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs555614061	chr6:141284320-141284321	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs11155147	chr6:141284321-141284322	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs35819872	chr6:141284385-141284386	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs566301506	chr6:141284395-141284396	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs533839605	chr6:141284398-141284399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs544218661	chr6:141284426-141284427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs7765547	chr6:141284453-141284454	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs577722013	chr6:141284510-141284511	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs112698336	chr6:141284532-141284533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs149165157	chr6:141284534-141284535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190846445	chr6:141284549-141284550	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs527862244	chr6:141284587-141284588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs535914050	chr6:141284596-141284597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs7769598	chr6:141284652-141284653	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs531957535	chr6:141284665-141284666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs138841795	chr6:141284689-141284690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs571269229	chr6:141284715-141284716	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs142822931	chr6:141284722-141284723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs547460431	chr6:141284727-141284728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs566069419	chr6:141284785-141284786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs9484451	chr6:141284856-141284857	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs147427770	chr6:141284897-141284898	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs554407625	chr6:141284936-141284937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs367688945	chr6:141284973-141284974	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs35309843	chr6:141284986-141284987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs180714645	chr6:141284990-141284991	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs117811026	chr6:141284997-141284998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs185717278	chr6:141285003-141285004	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs138236236	chr6:141285026-141285027	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs538424688	chr6:141285077-141285078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs376401985	chr6:141285089-141285090	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs545050021	chr6:141285135-141285136	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs9385927	chr6:141285136-141285137	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs190205257	chr6:141285139-141285140	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543201056	chr6:141285335-141285336	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs574151499	chr6:141285356-141285357	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs183152816	chr6:141285366-141285367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Gastric cancer	17908304	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Follicular lymphoma	18703704	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Breast cancer	21364760	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute monocytic leukemia	16498392	CNVD
Endocrine pancreatic tumor	17914106	CNVD
Soft tissue tumor	16732325	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
craniofacial dysmorphism	21918468	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:141282200-141287600	Weak transcription	Osteobl	bone

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