No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs563823193 |
chr1:173693030-173693031 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs577329263 |
chr1:173693034-173693035 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs74475932 |
chr1:173693149-173693150 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs140366366 |
chr1:173693162-173693163 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs528739870 |
chr1:173693188-173693189 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs149629808 |
chr1:173693213-173693214 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs139462621 |
chr1:173693266-173693267 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs562052941 |
chr1:173693269-173693270 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs548506074 |
chr1:173693275-173693276 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs375714592 |
chr1:173693311-173693312 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs571599460 |
chr1:173693312-173693313 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs560515125 |
chr1:173693339-173693340 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs145427819 |
chr1:173693369-173693370 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs527731870 |
chr1:173693381-173693382 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs549565430 |
chr1:173693390-173693391 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs547550078 |
chr1:173693450-173693451 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs188036348 |
chr1:173693509-173693510 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs193096339 |
chr1:173693539-173693540 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs538394722 |
chr1:173693555-173693556 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs552344560 |
chr1:173693681-173693682 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs7513315 |
chr1:173693694-173693695 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
22 |
rs185862906 |
chr1:173693745-173693746 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs188888901 |
chr1:173693762-173693763 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs71643168 |
chr1:173693766-173693767 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs114198073 |
chr1:173693797-173693798 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs537443474 |
chr1:173693892-173693893 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs557120547 |
chr1:173693893-173693894 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs146463664 |
chr1:173693903-173693904 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs149062620 |
chr1:173693904-173693905 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs570956708 |
chr1:173693908-173693909 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs78873745 |
chr1:173693909-173693910 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs573118925 |
chr1:173693942-173693943 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs542090364 |
chr1:173693972-173693973 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs562047510 |
chr1:173693976-173693977 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs116185683 |
chr1:173694066-173694067 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs549740365 |
chr1:173694142-173694143 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs563184071 |
chr1:173694150-173694151 |
Weak transcription Strong transcription ZNF genes & repeats
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs543333869 |
chr1:173694218-173694219 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs6658217 |
chr1:173694231-173694232 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
40 |
rs61826814 |
chr1:173694259-173694260 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs549918177 |
chr1:173694271-173694272 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs569520598 |
chr1:173694285-173694286 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs114021790 |
chr1:173694331-173694332 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs528315171 |
chr1:173694356-173694357 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs373894835 |
chr1:173694360-173694361 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs539589034 |
chr1:173694371-173694372 |
Weak transcription ZNF genes & repeats Strong transcription
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs61826815 |
chr1:173694408-173694409 |
ZNF genes & repeats Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs372815160 |
chr1:173694425-173694426 |
ZNF genes & repeats Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs536996008 |
chr1:173694456-173694457 |
ZNF genes & repeats Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs202121771 |
chr1:173694478-173694479 |
ZNF genes & repeats Weak transcription Strong transcription Genic enhancers
|
Chromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|