Variant report

Variant nsv3720
Chromosome Location chr3:20294613-20325323
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:20292400-20296000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr3:20292600-20296800 Weak transcription Ovary ovary
3 chr3:20293400-20295600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr3:20293400-20295800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr3:20293600-20295600 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr3:20293600-20297600 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr3:20295600-20296200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
8 chr3:20295600-20296400 Enhancers HUES6 Cell Line embryonic stem cell
9 chr3:20295800-20296000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr3:20295800-20296200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr3:20295800-20296200 Active TSS A549 lung
12 chr3:20295800-20296400 Active TSS Hela-S3 cervix
13 chr3:20296000-20296600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr3:20296200-20310800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr3:20296400-20300400 Enhancers Hela-S3 cervix
16 chr3:20296600-20306200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr3:20297000-20299400 Enhancers HUVEC blood vessel
18 chr3:20297400-20297600 Enhancers GM12878-XiMat blood
19 chr3:20297600-20298000 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr3:20297600-20298000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr3:20297600-20298000 Flanking Active TSS GM12878-XiMat blood
22 chr3:20297600-20298200 Enhancers NHEK skin
23 chr3:20297600-20298400 Enhancers HMEC breast
24 chr3:20297800-20298000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
25 chr3:20297800-20298200 Enhancers NH-A brain
26 chr3:20298400-20299600 Weak transcription HMEC breast
27 chr3:20299000-20300000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:20300000-20300200 Enhancers HMEC breast
29 chr3:20300000-20300400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
30 chr3:20306200-20306600 Enhancers Placenta Placenta
31 chr3:20306200-20306800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr3:20306200-20306800 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr3:20306200-20307000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr3:20306400-20306800 Enhancers HepG2 liver
35 chr3:20306800-20307000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
36 chr3:20309600-20312000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr3:20316600-20318600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr3:20317600-20329000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr3:20317800-20318200 Enhancers Primary T helper naive cells from peripheral blood blood
40 chr3:20318600-20319400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:20319400-20319800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr3:20319400-20320400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr3:20319800-20320800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr3:20320400-20322400 Enhancers HUES64 Cell Line embryonic stem cell
45 chr3:20320400-20322600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr3:20320800-20322200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr3:20321600-20322200 Enhancers HUES48 Cell Line embryonic stem cell
48 chr3:20321600-20322200 Enhancers Primary hematopoietic stem cells short term culture blood
49 chr3:20321600-20322200 Enhancers Primary T helper cells fromperipheralblood blood
50 chr3:20321600-20322200 Enhancers Primary Natural Killer cells fromperipheralblood blood

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