Variant report

Variant nsv427744
Chromosome Location chr6:5061006-5073109
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5055200-5061400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
2 chr6:5058200-5062000 Enhancers Fetal Intestine Small intestine
3 chr6:5058600-5063000 Enhancers Liver Liver
4 chr6:5058800-5064000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:5059800-5064400 Enhancers HepG2 liver
6 chr6:5060600-5061200 Weak transcription Fetal Intestine Large intestine
7 chr6:5061200-5061400 Enhancers Fetal Intestine Large intestine
8 chr6:5061400-5062000 Enhancers Adipose Nuclei Adipose
9 chr6:5061400-5062200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr6:5062000-5067000 Weak transcription Fetal Intestine Small intestine
11 chr6:5063000-5067600 Weak transcription Liver Liver
12 chr6:5063400-5063800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
13 chr6:5063800-5064200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
14 chr6:5064000-5064200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:5064200-5067000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr6:5064400-5067400 Weak transcription HepG2 liver
17 chr6:5065400-5067000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr6:5067000-5067200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
19 chr6:5067000-5067400 ZNF genes & repeats Fetal Intestine Small intestine
20 chr6:5067200-5067800 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr6:5067200-5068600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr6:5067400-5067800 ZNF genes & repeats Brain Hippocampus Middle brain
23 chr6:5067400-5068200 Enhancers HepG2 liver
24 chr6:5067400-5074000 Weak transcription Ovary ovary
25 chr6:5067600-5068800 Enhancers Liver Liver
26 chr6:5067800-5071200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr6:5068000-5068600 Weak transcription Fetal Intestine Small intestine
28 chr6:5068200-5068800 Enhancers Fetal Intestine Large intestine
29 chr6:5068200-5069000 Enhancers iPS-15b Cell Line embryonic stem cell
30 chr6:5068200-5069000 Flanking Active TSS HepG2 liver
31 chr6:5068600-5068800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr6:5068800-5074200 Weak transcription Fetal Intestine Large intestine
33 chr6:5069000-5073000 Enhancers HepG2 liver
34 chr6:5070800-5071000 Weak transcription Fetal Intestine Small intestine
35 chr6:5071000-5071800 Enhancers Fetal Intestine Small intestine
36 chr6:5071200-5073000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr6:5071800-5082400 Weak transcription Fetal Intestine Small intestine
38 chr6:5072200-5073400 Enhancers GM12878-XiMat blood
39 chr6:5073000-5073600 Weak transcription HepG2 liver

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