Variant report

Variant	nsv428084
Chromosome Location	chr3:54404258-54742756
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:54730389-54730653	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:54477776-54478157	HepG2	liver:	n/a	n/a
3	ATF2	chr3:54663698-54665005	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr3:54675200-54675922	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr3:54666267-54667360	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr3:54665071-54668509	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr3:54665419-54665996	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr3:54603528-54603544	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr3:54499097-54499131	K562	blood:	n/a	n/a
10	BHLHE40	chr3:54462354-54462615	K562	blood:	n/a	n/a
11	BHLHE40	chr3:54481392-54481812	HepG2	liver:	n/a	n/a
12	BHLHE40	chr3:54572067-54572126	K562	blood:	n/a	n/a
13	BHLHE40	chr3:54477676-54478056	HepG2	liver:	n/a	n/a
14	BRCA1	chr3:54592076-54592347	Hela-S3	cervix:	n/a	n/a
15	BRCA1	chr3:54663865-54664797	H1-hESC	embryonic stem cell:	n/a	n/a
16	BRCA1	chr3:54609565-54609755	Hela-S3	cervix:	n/a	n/a
17	CEBPB	chr3:54674830-54675164	IMR90	lung:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
18	CEBPB	chr3:54477963-54477998	IMR90	lung:	n/a	n/a
19	CEBPB	chr3:54705617-54705868	K562	blood:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
20	CEBPB	chr3:54662696-54662937	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr3:54602151-54602361	K562	blood:	n/a	chr3:54602271-54602280 chr3:54602269-54602280
22	CEBPB	chr3:54715668-54715902	Hela-S3	cervix:	n/a	chr3:54715761-54715772
23	CEBPB	chr3:54477713-54478193	HepG2	liver:	n/a	chr3:54477896-54477907 chr3:54477994-54478005 chr3:54477894-54477907
24	CEBPB	chr3:54686689-54687038	H1-hESC	embryonic stem cell:	n/a	n/a
25	CEBPB	chr3:54591516-54592482	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr3:54730351-54730570	HepG2	liver:	n/a	n/a
27	CEBPB	chr3:54602107-54602417	HepG2	liver:	n/a	chr3:54602271-54602280 chr3:54602269-54602280
28	CEBPB	chr3:54686758-54687043	HepG2	liver:	n/a	n/a
29	CEBPB	chr3:54642650-54642901	HepG2	liver:	n/a	chr3:54642772-54642785
30	CEBPB	chr3:54615873-54616073	H1-hESC	embryonic stem cell:	n/a	chr3:54615964-54615975
31	CEBPB	chr3:54674321-54674582	H1-hESC	embryonic stem cell:	n/a	n/a
32	CEBPB	chr3:54477849-54478067	A549	lung:	n/a	chr3:54477896-54477907 chr3:54477994-54478005 chr3:54477894-54477907
33	CEBPB	chr3:54424414-54424727	HepG2	liver:	n/a	chr3:54424553-54424564
34	CEBPB	chr3:54674807-54675436	H1-hESC	embryonic stem cell:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
35	CEBPB	chr3:54674840-54675118	Hela-S3	cervix:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998
36	CEBPB	chr3:54425115-54425333	K562	blood:	n/a	chr3:54425168-54425179
37	CEBPB	chr3:54568258-54568532	A549	lung:	n/a	chr3:54568370-54568381
38	CEBPB	chr3:54410245-54410410	IMR90	lung:	n/a	chr3:54410359-54410370
39	CEBPB	chr3:54425057-54425323	HepG2	liver:	n/a	chr3:54425168-54425179
40	CEBPB	chr3:54715599-54715947	H1-hESC	embryonic stem cell:	n/a	chr3:54715761-54715772
41	CEBPB	chr3:54410231-54410490	H1-hESC	embryonic stem cell:	n/a	chr3:54410359-54410370
42	CEBPB	chr3:54662772-54662821	K562	blood:	n/a	n/a
43	CEBPB	chr3:54562052-54562387	Hela-S3	cervix:	n/a	n/a
44	CEBPB	chr3:54568326-54568422	Hela-S3	cervix:	n/a	chr3:54568370-54568381
45	CEBPB	chr3:54658734-54658901	HepG2	liver:	n/a	n/a
46	CEBPB	chr3:54517172-54517420	HepG2	liver:	n/a	chr3:54517253-54517262 chr3:54517253-54517262 chr3:54517251-54517264 chr3:54517253-54517262
47	CEBPB	chr3:54477774-54478157	MCF-7	breast:	n/a	chr3:54477896-54477907 chr3:54477994-54478005 chr3:54477894-54477907
48	CEBPB	chr3:54705569-54705888	H1-hESC	embryonic stem cell:	n/a	chr3:54705720-54705733 chr3:54705720-54705731 chr3:54705720-54705733 chr3:54705721-54705732 chr3:54705720-54705731 chr3:54705720-54705733
49	CEBPB	chr3:54686688-54687024	Hela-S3	cervix:	n/a	n/a
50	CEBPB	chr3:54674809-54675161	A549	lung:	n/a	chr3:54674987-54674998 chr3:54674987-54675000 chr3:54674987-54675000 chr3:54674988-54674999 chr3:54674863-54674876 chr3:54674989-54674998

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:54674847-54674897	U87	brain:	n/a
2	chr3:54674405-54674455	Jurkat	blood:	n/a
3	chr3:54660532-54660582	HCF	heart:	n/a
4	chr3:54732582-54732632	AG09309	skin:	n/a
5	chr3:54674847-54674897	U87	brain:	n/a
6	chr3:54674405-54674455	Jurkat	blood:	n/a
7	chr3:54660532-54660582	HCF	heart:	n/a
8	chr3:54732582-54732632	AG09309	skin:	n/a
9	chr3:54666934-54666984	AoSMC	blood vessel:	n/a
10	chr3:54660332-54660382	PANC-1	pancreas:	n/a
11	chr3:54606265-54606315	GM12891	blood:	n/a
12	chr3:54634169-54634219	HAEpiC	amniotic membrane:	n/a
13	chr3:54737888-54737938	BE2_C	brain:	n/a
14	chr3:54659987-54660037	K562	blood:	n/a
15	chr3:54656965-54657015	NHDF-neo	bronchial:	n/a
16	chr3:54737888-54737938	HIPEpiC	eye:	n/a
17	chr3:54660438-54660488	A549	lung:	n/a
18	chr3:54660438-54660488	ECC-1	luminal epithelium:	n/a
19	chr3:54660934-54660984	LNCaP	prostate:	n/a
20	chr3:54673387-54673437	HIPEpiC	eye:	n/a
21	chr3:54659987-54660037	SK-N-SH	brain:	n/a
22	chr3:54704963-54705013	Hepatocyte	liver:	n/a
23	chr3:54674405-54674455	AG04449	skin:	fetal
24	chr3:54656965-54657015	HEEpiC	esophagus:	n/a
25	chr3:54732582-54732632	PFSK-1	brain:	n/a
26	chr3:54673387-54673437	AG09319	gingival:	n/a
27	chr3:54674405-54674455	HEK293	kidney:	embryo
28	chr3:54732582-54732632	BE2_C	brain:	n/a
29	chr3:54606265-54606315	HPAEpiC	pulmonary alveolar:	n/a
30	chr3:54737888-54737938	PrEC	prostate:	n/a
31	chr3:54674405-54674455	NHDF-neo	bronchial:	n/a
32	chr3:54660934-54660984	H1-hESC	embryonic stem cell:	embryo
33	chr3:54704963-54705013	SK-N-SH_RA	brain:	n/a
34	chr3:54606265-54606315	NH-A	brain:	n/a
35	chr3:54660332-54660382	ovcar-3	ovarian:	n/a
36	chr3:54674405-54674455	AG09319	gingival:	n/a
37	chr3:54579548-54579598	BE2_C	brain:	n/a
38	chr3:54659987-54660037	HL-60	blood:	n/a
39	chr3:54660934-54660984	HRPEpiC	eye:	n/a
40	chr3:54700753-54700803	Caco-2	colon:	n/a
41	chr3:54704963-54705013	Jurkat	blood:	n/a
42	chr3:54660532-54660582	HIPEpiC	eye:	n/a
43	chr3:54674847-54674897	HRCEpiC	kidney:	n/a
44	chr3:54737888-54737938	GM12891	blood:	n/a
45	chr3:54674847-54674897	Hepatocyte	liver:	n/a
46	chr3:54663570-54663620	PrEC	prostate:	n/a
47	chr3:54637227-54637277	IMR90	lung:	fetal
48	chr3:54660934-54660984	HepG2	liver:	n/a
49	chr3:54737888-54737938	AoSMC	blood vessel:	n/a
50	chr3:54634169-54634219	GM12892	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr3:54557793..54560174-chr3:54563336..54565022,2	MCF-7	breast:
2	chr3:54738031..54740045-chr3:54741949..54744426,2	K562	blood:
3	chr3:54398589..54400441-chr3:54403161..54405917,2	MCF-7	breast:
4	chr3:54477529..54479900-chr3:54479962..54482287,2	MCF-7	breast:
5	chr3:54467613..54468517-chr3:54511646..54512238,3	MCF-7	breast:
6	chr3:53975890..53976731-chr3:54408411..54409245,4	MCF-7	breast:
7	chr3:53972762..53973440-chr3:54466985..54468092,3	MCF-7	breast:
8	chr3:54467626..54468675-chr3:54567589..54568828,8	MCF-7	breast:
9	chr3:54180378..54181313-chr3:54408336..54409118,3	MCF-7	breast:
10	chr3:54180353..54181315-chr3:54467438..54468079,2	MCF-7	breast:
11	chr3:54620668..54622185-chr3:54626835..54628761,2	K562	blood:
12	chr3:54602000..54603930-chr3:54604482..54606536,2	K562	blood:
13	chr3:54467613..54468517-chr3:54511646..54512238,3	MCF-7	breast:
14	chr3:53975728..53976241-chr3:54467635..54468465,2	MCF-7	breast:
15	chr3:54738031..54740045-chr3:54741949..54744426,2	K562	blood:
16	chr3:54602000..54603930-chr3:54604482..54606536,2	K562	blood:
17	chr3:54375174..54375975-chr3:54461350..54461870,2	MCF-7	breast:
18	chr3:54736841..54738842-chr3:54744528..54747366,2	K562	blood:
19	chr3:54462064..54462651-chr3:55047338..55047880,2	MCF-7	breast:
20	chr3:54605051..54606719-chr3:54610299..54612604,2	K562	blood:
21	chr3:54620668..54622185-chr3:54626835..54628761,2	K562	blood:
22	chr3:54516540..54518634-chr3:54529367..54532226,2	K562	blood:
23	chr3:54516540..54518634-chr3:54529367..54532226,2	K562	blood:
24	chr3:54522382..54524571-chr3:54629813..54631587,2	MCF-7	breast:
25	chr3:54467585..54468369-chr3:54511234..54512210,5	MCF-7	breast:
26	chr3:54657347..54660339-chr3:54665865..54667406,2	MCF-7	breast:
27	chr3:54477529..54479900-chr3:54479962..54482287,2	MCF-7	breast:
28	chr3:54467585..54468369-chr3:54511234..54512210,5	MCF-7	breast:
29	chr3:54605051..54606719-chr3:54610299..54612604,2	K562	blood:
30	chr3:54467626..54468675-chr3:54567589..54568828,8	MCF-7	breast:
31	chr3:54522382..54524571-chr3:54629813..54631587,2	MCF-7	breast:
32	chr3:54557793..54560174-chr3:54563336..54565022,2	MCF-7	breast:
33	chr3:54180351..54181371-chr3:54408193..54409184,9	MCF-7	breast:
34	chr3:53972769..53973308-chr3:54408265..54408788,2	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LRTM1-4	chr3:54657638-54657666	NONHSAT090014
2	lnc-LRTM1-4	chr3:54657178-54657484	NONHSAT090014
3	lnc-LRTM1-4	chr3:54649137-54649163	NONHSAT090014
4	lnc-LRTM1-5	chr3:54646758-54648924	ucscGeneNc_uc003dhj_2
5	lnc-LRTM1-5	chr3:54642626-54642807	ucscGeneNc_uc003dhj_2
6	lnc-LRTM1-3	chr3:54666151-54666883	NONHSAT090017
7	lnc-LRTM1-5	chr3:54641193-54641874	ucscGeneNc_uc003dhj_2
8	lnc-LRTM1-5	chr3:54643528-54643632	ucscGeneNc_uc003dhj_2

Variant related genes	Relation type
ESRG	TF binding region
RPS15P5	TF binding region
ESRG	CpG island
RPS15P5	CpG island
ENSG00000229806	chromatin interactions

Extended variants
information (count: 10335 )
Associated
traits (count: 83 )

Variant overlapped rSNPs/rCNVs (count:10335 , 50 per page) page: 1 2 3 4 5 6 7 ... 207

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4025912	chr3:54404288-54404289	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs564696229	chr3:54404302-54404303	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs578262452	chr3:54404327-54404328	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs540908310	chr3:54404347-54404348	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs140287454	chr3:54404388-54404389	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs529268658	chr3:54404392-54404393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs118077611	chr3:54404448-54404449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs562791937	chr3:54404478-54404479	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs530742017	chr3:54404518-54404519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs550542953	chr3:54404545-54404546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs145109628	chr3:54404556-54404557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs564296137	chr3:54404557-54404558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs370963289	chr3:54404594-54404595	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs77166653	chr3:54404611-54404612	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs546457506	chr3:54404679-54404680	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs370681562	chr3:54404681-54404682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs549968628	chr3:54404717-54404718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs13314582	chr3:54404746-54404747	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs138922298	chr3:54404780-54404781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs200265056	chr3:54404784-54404785	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs187699450	chr3:54404785-54404786	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs374098170	chr3:54404863-54404864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371510697	chr3:54404864-54404865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs575289697	chr3:54404875-54404876	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs77665050	chr3:54404876-54404877	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs558098031	chr3:54404878-54404879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs397960437	chr3:54404880-54404881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs578113359	chr3:54404898-54404899	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs540942802	chr3:54404982-54404983	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs560737574	chr3:54404996-54404997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs535700252	chr3:54405046-54405047	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs35793532	chr3:54405103-54405104	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs376363752	chr3:54405281-54405282	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs566069766	chr3:54405297-54405298	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs77796849	chr3:54405309-54405310	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs59080449	chr3:54405355-54405356	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs551829877	chr3:54405357-54405358	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs367673791	chr3:54405392-54405393	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs564159245	chr3:54405447-54405448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs72988023	chr3:54405449-54405450	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs546494434	chr3:54405471-54405472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs192425929	chr3:54405486-54405487	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs58313414	chr3:54405496-54405497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs73841998	chr3:54405584-54405585	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs73841999	chr3:54405611-54405612	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs75012950	chr3:54405634-54405635	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs537579228	chr3:54405641-54405642	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs374644883	chr3:54405665-54405666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs557798674	chr3:54405676-54405677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs571889573	chr3:54405702-54405703	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:83)

Disease	PMID	Source
Melanoma	18172304	CNVD
Cervical cancer	21062161	CNVD
Hirschsprung''s Disease	21712996	CNVD
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17133270	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Melanoma	20688739	CNVD
Acute myeloid leukemia	21251322	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	21785460	CNVD
Neuroblastoma	17327916	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16608533	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Renal cell carcinoma	18765545	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
Prostate cancer	18632612	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Myelofibrosis	22110671	CNVD
Urothelial cell carcinoma	18451213	CNVD
Breast cancer	19490591	CNVD
Autism	18414403	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-small cell lung cancer	20864512	CNVD
Metastatic melanoma	17975146	CNVD

Chromatin state (count:1258 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:54392600-54410200	Weak transcription	Ovary	ovary
2	chr3:54395400-54407800	Weak transcription	Hela-S3	cervix
3	chr3:54395400-54409000	Weak transcription	Right Atrium	heart
4	chr3:54401000-54409600	Weak transcription	Fetal Lung	lung
5	chr3:54401400-54406000	Weak transcription	Stomach Mucosa	stomach
6	chr3:54406000-54406600	Enhancers	Stomach Mucosa	stomach
7	chr3:54406200-54406400	Enhancers	Psoas Muscle	Psoas
8	chr3:54406400-54410200	Weak transcription	Psoas Muscle	Psoas
9	chr3:54407000-54408000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr3:54407600-54408600	Enhancers	Primary hematopoietic stem cells	blood
11	chr3:54407600-54408800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr3:54407600-54408800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr3:54407800-54411200	Enhancers	Hela-S3	cervix
14	chr3:54408000-54408600	Enhancers	Primary hematopoietic stem cells short term culture	blood
15	chr3:54408400-54409200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr3:54409000-54411400	Enhancers	Right Atrium	heart
17	chr3:54409600-54410400	Enhancers	Right Ventricle	heart
18	chr3:54409600-54411800	Enhancers	Fetal Lung	lung
19	chr3:54410200-54410600	Enhancers	Fetal Muscle Trunk	muscle
20	chr3:54410200-54410600	Enhancers	Psoas Muscle	Psoas
21	chr3:54410200-54411400	Enhancers	Ovary	ovary
22	chr3:54410200-54411600	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr3:54410200-54412600	Enhancers	Fetal Brain Male	brain
24	chr3:54410600-54410800	Enhancers	Fetal Brain Female	brain
25	chr3:54410800-54411200	Enhancers	Fetal Muscle Trunk	muscle
26	chr3:54410800-54411800	Weak transcription	Fetal Brain Female	brain
27	chr3:54411000-54411200	Enhancers	Rectal Smooth Muscle	rectum
28	chr3:54411200-54423400	Weak transcription	Hela-S3	cervix
29	chr3:54411800-54412600	Enhancers	Fetal Brain Female	brain
30	chr3:54412000-54412600	Enhancers	Spleen	Spleen
31	chr3:54412200-54413200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr3:54413200-54413400	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr3:54413200-54413800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
34	chr3:54413400-54414000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr3:54413800-54414200	Enhancers	Duodenum Smooth Muscle	Duodenum
36	chr3:54413800-54414400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr3:54414000-54414200	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr3:54423400-54423800	Enhancers	Hela-S3	cervix
39	chr3:54424600-54427200	Weak transcription	Skeletal Muscle Female	skeletal muscle
40	chr3:54424800-54427400	Weak transcription	Pancreas	Pancrea
41	chr3:54425400-54428400	Weak transcription	Colon Smooth Muscle	Colon
42	chr3:54426600-54429000	Weak transcription	Brain Substantia Nigra	brain
43	chr3:54427200-54428200	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
44	chr3:54427400-54427800	Enhancers	Pancreas	Pancrea
45	chr3:54427600-54427800	Bivalent Enhancer	Right Ventricle	heart
46	chr3:54427800-54428200	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr3:54428200-54434400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr3:54434400-54434800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr3:54434600-54434800	ZNF genes & repeats	Liver	Liver
50	chr3:54452800-54453200	Enhancers	Adipose Nuclei	Adipose

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