Variant report

Variant nsv428587
Chromosome Location chr12:41375635-41546845
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:308 , 50 per page) page: 1 2 3 4 5 6 7
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:41374600-41404800 Weak transcription Brain Angular Gyrus brain
2 chr12:41374800-41377400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr12:41374800-41386200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:41377400-41386200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr12:41378200-41378400 Enhancers Pancreas Pancrea
6 chr12:41379400-41380400 Enhancers A549 lung
7 chr12:41379600-41379800 Enhancers Colon Smooth Muscle Colon
8 chr12:41379800-41381200 Weak transcription Colon Smooth Muscle Colon
9 chr12:41381200-41383800 Enhancers Rectal Smooth Muscle rectum
10 chr12:41381200-41384600 Enhancers Colon Smooth Muscle Colon
11 chr12:41381800-41382200 Enhancers Fetal Stomach stomach
12 chr12:41381800-41383800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
13 chr12:41382000-41382400 Enhancers Stomach Smooth Muscle stomach
14 chr12:41382400-41382800 Weak transcription Stomach Smooth Muscle stomach
15 chr12:41382800-41383400 Enhancers Duodenum Smooth Muscle Duodenum
16 chr12:41382800-41383800 Enhancers Breast Myoepithelial Primary Cells Breast
17 chr12:41382800-41383800 Enhancers Stomach Smooth Muscle stomach
18 chr12:41383400-41386400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:41383800-41388400 Weak transcription Rectal Smooth Muscle rectum
20 chr12:41384600-41389400 Weak transcription Colon Smooth Muscle Colon
21 chr12:41386000-41387800 Enhancers NHEK skin
22 chr12:41386200-41386600 Enhancers HUES48 Cell Line embryonic stem cell
23 chr12:41386200-41387600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr12:41386200-41387800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr12:41386400-41386800 Enhancers iPS-18 Cell Line embryonic stem cell
26 chr12:41386400-41387000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr12:41386600-41387000 Enhancers iPS-20b Cell Line embryonic stem cell
28 chr12:41387600-41390600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr12:41387800-41389400 Weak transcription NHEK skin
30 chr12:41387800-41389800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr12:41388400-41388600 Enhancers Rectal Smooth Muscle rectum
32 chr12:41388600-41389200 Weak transcription Rectal Smooth Muscle rectum
33 chr12:41389200-41389400 Enhancers Rectal Smooth Muscle rectum
34 chr12:41389400-41389600 Enhancers NHEK skin
35 chr12:41389400-41389800 Enhancers Colon Smooth Muscle Colon
36 chr12:41389800-41392000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr12:41390600-41391400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
38 chr12:41391400-41392800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr12:41392000-41396600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr12:41392800-41393400 Enhancers HUVEC blood vessel
41 chr12:41392800-41393600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr12:41393600-41398600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr12:41394400-41394600 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr12:41395000-41405200 Weak transcription Ovary ovary
45 chr12:41396600-41397200 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr12:41397800-41398200 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr12:41398400-41400800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
48 chr12:41398600-41399000 ZNF genes & repeats Brain Inferior Temporal Lobe brain
49 chr12:41398600-41402000 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr12:41398600-41403600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin

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