Variant report

Variant nsv428637
Chromosome Location chr15:54279125-54500755
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:169 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:54271800-54281200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr15:54277000-54283800 Weak transcription Fetal Lung lung
3 chr15:54278200-54283600 Weak transcription Aorta Aorta
4 chr15:54279800-54280200 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr15:54280000-54280400 Enhancers iPS-15b Cell Line embryonic stem cell
6 chr15:54283800-54286000 ZNF genes & repeats Fetal Lung lung
7 chr15:54284400-54284600 ZNF genes & repeats Aorta Aorta
8 chr15:54285400-54285800 ZNF genes & repeats Aorta Aorta
9 chr15:54285800-54288200 Weak transcription Aorta Aorta
10 chr15:54286000-54302000 Weak transcription Fetal Lung lung
11 chr15:54288200-54288400 Enhancers Aorta Aorta
12 chr15:54288400-54288600 Weak transcription Aorta Aorta
13 chr15:54299600-54300200 ZNF genes & repeats Aorta Aorta
14 chr15:54300200-54305200 Weak transcription Aorta Aorta
15 chr15:54302000-54302800 Strong transcription Fetal Lung lung
16 chr15:54302800-54303200 Weak transcription Fetal Lung lung
17 chr15:54303200-54305400 Enhancers Fetal Lung lung
18 chr15:54303800-54304200 Enhancers Cortex derived primary cultured neurospheres brain
19 chr15:54304000-54310000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr15:54304600-54304800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr15:54305200-54305400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr15:54305200-54305400 Strong transcription Aorta Aorta
23 chr15:54305400-54306000 ZNF genes & repeats Aorta Aorta
24 chr15:54305400-54306600 Genic enhancers Fetal Lung lung
25 chr15:54305400-54310200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:54306000-54307000 Weak transcription Aorta Aorta
27 chr15:54306200-54306400 Enhancers Skeletal Muscle Male skeletal muscle
28 chr15:54306400-54310000 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr15:54306600-54307400 Enhancers Fetal Lung lung
30 chr15:54307400-54308400 Weak transcription Fetal Lung lung
31 chr15:54308400-54308600 Enhancers Fetal Lung lung
32 chr15:54308600-54309000 Weak transcription Fetal Lung lung
33 chr15:54309000-54311000 Enhancers Fetal Lung lung
34 chr15:54309800-54311000 Enhancers Colon Smooth Muscle Colon
35 chr15:54309800-54311000 Enhancers Fetal Brain Male brain
36 chr15:54310000-54310400 Enhancers Skeletal Muscle Female skeletal muscle
37 chr15:54310000-54310400 Enhancers Stomach Smooth Muscle stomach
38 chr15:54310000-54311000 Enhancers Skeletal Muscle Male skeletal muscle
39 chr15:54310200-54310400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr15:54310200-54311000 Enhancers Duodenum Smooth Muscle Duodenum
41 chr15:54311000-54314000 Weak transcription Fetal Brain Male brain
42 chr15:54311000-54314000 Weak transcription Fetal Lung lung
43 chr15:54314000-54314600 ZNF genes & repeats Fetal Lung lung
44 chr15:54314600-54325200 Weak transcription Fetal Lung lung
45 chr15:54315600-54321800 Weak transcription Aorta Aorta
46 chr15:54319200-54319600 Enhancers ES-I3 Cell Line embryonic stem cell
47 chr15:54319600-54320200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr15:54319600-54322000 Weak transcription ES-I3 Cell Line embryonic stem cell
49 chr15:54320200-54321800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr15:54321000-54322400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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