Variant report

Variant	nsv428656
Chromosome Location	chr16:47316866-47469918
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:541)
CpG islands
(count:305)
Chromatin interactive
region (count:37)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:541 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:47426038-47426363	K562	blood:	n/a	n/a
2	ARID3A	chr16:47421094-47421294	HepG2	liver:	n/a	n/a
3	ARID3A	chr16:47428252-47428453	HepG2	liver:	n/a	n/a
4	ARID3A	chr16:47357253-47357463	HepG2	liver:	n/a	n/a
5	ARID3A	chr16:47431618-47431623	HepG2	liver:	n/a	n/a
6	ATF1	chr16:47427309-47427338	K562	blood:	n/a	n/a
7	ATF1	chr16:47426003-47426482	K562	blood:	n/a	n/a
8	ATF1	chr16:47422668-47422993	K562	blood:	n/a	n/a
9	ATF2	chr16:47344576-47345243	GM12878	blood:	n/a	n/a
10	ATF2	chr16:47351722-47352080	GM12878	blood:	n/a	n/a
11	BATF	chr16:47364473-47364700	GM12878	blood:	n/a	n/a
12	BATF	chr16:47364453-47364807	GM12878	blood:	n/a	n/a
13	BATF	chr16:47426120-47426365	GM12878	blood:	n/a	n/a
14	BATF	chr16:47344674-47344855	GM12878	blood:	n/a	n/a
15	BATF	chr16:47365904-47366048	GM12878	blood:	n/a	n/a
16	BCL11A	chr16:47344674-47344906	GM12878	blood:	n/a	n/a
17	BCL11A	chr16:47425946-47426396	GM12878	blood:	n/a	n/a
18	BCL11A	chr16:47468300-47468435	GM12878	blood:	n/a	n/a
19	BCL11A	chr16:47345681-47345863	H1-hESC	embryonic stem cell:	n/a	n/a
20	BCL3	chr16:47351809-47352137	GM12878	blood:	n/a	n/a
21	BCLAF1	chr16:47425993-47426507	GM12878	blood:	n/a	n/a
22	BHLHE40	chr16:47426082-47426380	K562	blood:	n/a	n/a
23	BHLHE40	chr16:47422709-47422928	K562	blood:	n/a	n/a
24	BHLHE40	chr16:47351717-47352098	GM12878	blood:	n/a	n/a
25	CBX3	chr16:47425970-47426387	K562	blood:	n/a	n/a
26	CBX3	chr16:47383008-47383245	K562	blood:	n/a	n/a
27	CBX3	chr16:47422270-47422614	K562	blood:	n/a	n/a
28	CCNT2	chr16:47426027-47426309	K562	blood:	n/a	n/a
29	CEBPB	chr16:47399815-47400539	H1-hESC	embryonic stem cell:	n/a	n/a
30	CEBPB	chr16:47343568-47343827	IMR90	lung:	n/a	n/a
31	CEBPB	chr16:47447638-47447768	K562	blood:	n/a	chr16:47447727-47447738
32	CEBPB	chr16:47340948-47341071	K562	blood:	n/a	n/a
33	CEBPB	chr16:47464988-47465403	HepG2	liver:	n/a	chr16:47465276-47465287
34	CEBPB	chr16:47437404-47437590	A549	lung:	n/a	chr16:47437497-47437508
35	CEBPB	chr16:47447583-47447772	IMR90	lung:	n/a	chr16:47447727-47447738
36	CEBPB	chr16:47334783-47334834	HepG2	liver:	n/a	chr16:47334787-47334798 chr16:47334787-47334800 chr16:47334787-47334800 chr16:47334788-47334799
37	CEBPB	chr16:47386725-47386748	HepG2	liver:	n/a	n/a
38	CEBPB	chr16:47462019-47462110	HepG2	liver:	n/a	chr16:47462076-47462087
39	CEBPB	chr16:47338272-47338613	IMR90	lung:	n/a	n/a
40	CEBPB	chr16:47426174-47426347	K562	blood:	n/a	n/a
41	CEBPB	chr16:47437353-47437582	HepG2	liver:	n/a	chr16:47437497-47437508
42	CEBPB	chr16:47378031-47378064	A549	lung:	n/a	n/a
43	CEBPB	chr16:47340109-47340380	HepG2	liver:	n/a	chr16:47340253-47340264 chr16:47340251-47340262
44	CEBPB	chr16:47380572-47380666	HepG2	liver:	n/a	n/a
45	CEBPB	chr16:47335027-47335082	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr16:47437802-47437960	A549	lung:	n/a	n/a
47	CEBPB	chr16:47367839-47368048	A549	lung:	n/a	chr16:47367934-47367945
48	CEBPB	chr16:47429783-47429903	K562	blood:	n/a	n/a
49	CEBPB	chr16:47447682-47447892	HepG2	liver:	n/a	chr16:47447727-47447738
50	CEBPB	chr16:47318928-47319316	Hela-S3	cervix:	n/a	n/a

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:47409367-47409417	NT2-D1	testis:	n/a
2	chr16:47362879-47362929	HEEpiC	esophagus:	n/a
3	chr16:47338451-47338501	HCPEpiC	choroid plexus:	n/a
4	chr16:47338451-47338501	HRPEpiC	eye:	n/a
5	chr16:47420506-47420556	HNPCEpiC	eye:	n/a
6	chr16:47338451-47338501	HMEC	breast:	n/a
7	chr16:47409367-47409417	Jurkat	blood:	n/a
8	chr16:47362879-47362929	HCT-116	colon:	n/a
9	chr16:47338451-47338501	HCF	heart:	n/a
10	chr16:47362879-47362929	NHDF-neo	bronchial:	n/a
11	chr16:47344826-47344876	MCF-7	breast:	n/a
12	chr16:47420506-47420556	PFSK-1	brain:	n/a
13	chr16:47362879-47362929	NB4	blood:	n/a
14	chr16:47344826-47344876	K562	blood:	n/a
15	chr16:47420506-47420556	AG04449	skin:	fetal
16	chr16:47409367-47409417	GM12891	blood:	n/a
17	chr16:47362879-47362929	AoSMC	blood vessel:	n/a
18	chr16:47409367-47409417	HPAEpiC	pulmonary alveolar:	n/a
19	chr16:47338451-47338501	MCF10A-Er-Src	breast:	n/a
20	chr16:47409367-47409417	IMR90	lung:	fetal
21	chr16:47338451-47338501	CMK	blood:	n/a
22	chr16:47344826-47344876	HUVEC	blood vessel:	n/a
23	chr16:47420506-47420556	PrEC	prostate:	n/a
24	chr16:47409367-47409417	CMK	blood:	n/a
25	chr16:47420506-47420556	BJ	skin:	n/a
26	chr16:47338451-47338501	HCM	heart:	n/a
27	chr16:47409367-47409417	RPTEC	kidney:	n/a
28	chr16:47409367-47409417	HEK293	kidney:	embryo
29	chr16:47409367-47409417	HUVEC	blood vessel:	n/a
30	chr16:47420506-47420556	GM12878	blood:	n/a
31	chr16:47409367-47409417	MCF-7	breast:	n/a
32	chr16:47420506-47420556	RPTEC	kidney:	n/a
33	chr16:47362879-47362929	HEK293	kidney:	embryo
34	chr16:47362879-47362929	SAEC	small airway:	n/a
35	chr16:47409367-47409417	NHDF-neo	bronchial:	n/a
36	chr16:47338451-47338501	RPTEC	kidney:	n/a
37	chr16:47344826-47344876	HRE	kidney:	n/a
38	chr16:47344826-47344876	H1-hESC	embryonic stem cell:	embryo
39	chr16:47344826-47344876	AG04450	lung:	fetal
40	chr16:47362879-47362929	AG09309	skin:	n/a
41	chr16:47338451-47338501	GM12891	blood:	n/a
42	chr16:47344826-47344876	MCF10A-Er-Src	breast:	n/a
43	chr16:47344826-47344876	HCF	heart:	n/a
44	chr16:47362879-47362929	Hela-S3	cervix:	n/a
45	chr16:47409367-47409417	HAEpiC	amniotic membrane:	n/a
46	chr16:47344826-47344876	HEK293	kidney:	embryo
47	chr16:47420506-47420556	HCPEpiC	choroid plexus:	n/a
48	chr16:47420506-47420556	LNCaP	prostate:	n/a
49	chr16:47362879-47362929	T-47D	breast:	n/a
50	chr16:47420506-47420556	Hepatocyte	liver:	n/a

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr16:47407846..47410097-chr16:47493720..47495618,2	MCF-7	breast:
2	chr16:47386165..47387733-chr16:47392448..47394557,2	K562	blood:
3	chr16:47424343..47428876-chr16:47431366..47438255,7	K562	blood:
4	chr16:47337967..47339829-chr16:47344000..47345924,2	K562	blood:
5	chr16:47305590..47308851-chr16:47316493..47319236,3	K562	blood:
6	chr16:47449583..47451141-chr16:47452818..47455615,2	K562	blood:
7	chr16:47439487..47441195-chr16:47493204..47494931,2	K562	blood:
8	chr16:47386165..47387733-chr16:47392448..47394557,2	K562	blood:
9	chr16:47464879..47466397-chr16:47504717..47506667,2	K562	blood:
10	chr16:47419086..47421518-chr16:47425690..47428678,2	K562	blood:
11	chr16:47437100..47439827-chr16:47493895..47495575,2	K562	blood:
12	chr16:47419086..47421518-chr16:47425690..47428678,2	K562	blood:
13	chr1:192021477..192022058-chr16:47435294..47435896,2	MCF-7	breast:
14	chr16:47352976..47355256-chr16:47362064..47365437,3	K562	blood:
15	chr16:47449583..47451141-chr16:47452818..47455615,2	K562	blood:
16	chr16:47414999..47416779-chr16:47426275..47428924,2	MCF-7	breast:
17	chr16:47410478..47412557-chr16:47418181..47419832,2	K562	blood:
18	chr16:47404244..47406062-chr16:47411179..47413433,2	K562	blood:
19	chr16:47315203..47316940-chr16:47529898..47531487,2	K562	blood:
20	chr16:47421435..47423287-chr16:47429426..47431466,2	MCF-7	breast:
21	chr16:47352976..47355256-chr16:47362064..47365437,3	K562	blood:
22	chr16:47432128..47434331-chr16:47440523..47442173,2	K562	blood:
23	chr16:47431082..47433440-chr16:47448856..47451690,2	K562	blood:
24	chr16:47343363..47345915-chr16:47349595..47352299,2	K562	blood:
25	chr16:47417370..47418915-chr16:47424490..47426558,2	K562	blood:
26	chr16:47414999..47416779-chr16:47426275..47428924,2	MCF-7	breast:
27	chr16:47416227..47418087-chr16:47500282..47502102,2	K562	blood:
28	chr16:47424343..47428876-chr16:47431366..47438255,7	K562	blood:
29	chr16:47404244..47406062-chr16:47411179..47413433,2	K562	blood:
30	chr16:47417370..47418915-chr16:47424490..47426558,2	K562	blood:
31	chr16:47426138..47427741-chr16:47428449..47430981,2	K562	blood:
32	chr16:47432128..47434331-chr16:47440523..47442173,2	K562	blood:
33	chr16:47410478..47412557-chr16:47418181..47419832,2	K562	blood:
34	chr16:47418744..47420370-chr16:47492976..47495384,2	K562	blood:
35	chr16:47441890..47444403-chr16:47493696..47496197,3	K562	blood:
36	chr16:47431082..47433440-chr16:47448856..47451690,2	K562	blood:
37	chr16:47425026..47428927-chr16:47493146..47496733,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PHKB-1	chr16:47346550-47346651	ENSG00000261369.1
2	lnc-PHKB-1	chr16:47333358-47333859	ENSG00000261369.1
3	lnc-PHKB-1	chr16:47351460-47351725	ENSG00000261369.1

No data

Variant related genes	Relation type
ITFG1	TF binding region
ENSG00000261369	TF binding region
ENSG00000222767	TF binding region
ITFG1	CpG island
ENSG00000261369	CpG island
ENSG00000222767	CpG island
ENSG00000129636	chromatin interactions
ENSG00000102893	chromatin interactions

Extended variants
information (count: 4973 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:4973 , 50 per page) page: 1 2 3 4 5 6 7 ... 100

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs539627951	chr16:47316894-47316895	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs558818064	chr16:47316906-47316907	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs551877378	chr16:47316922-47316923	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs184363428	chr16:47317003-47317004	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs566621312	chr16:47317029-47317030	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs142676233	chr16:47317117-47317118	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs189127499	chr16:47317149-47317150	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs181127041	chr16:47317168-47317169	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs186714589	chr16:47317185-47317186	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs556840013	chr16:47317187-47317188	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs111441981	chr16:47317200-47317201	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs138758301	chr16:47317262-47317263	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs573229053	chr16:47317265-47317266	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs540507824	chr16:47317338-47317339	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs141781547	chr16:47317340-47317341	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs532561334	chr16:47317343-47317344	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs79548925	chr16:47317432-47317433	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs562798065	chr16:47317461-47317462	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs530120025	chr16:47317495-47317496	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs548264388	chr16:47317497-47317498	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs535709369	chr16:47317573-47317574	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs566839059	chr16:47317589-47317590	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs146236231	chr16:47317646-47317647	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs552492325	chr16:47317666-47317667	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs556961860	chr16:47317689-47317690	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs570706451	chr16:47317731-47317732	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs565641750	chr16:47317812-47317813	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs539566601	chr16:47317814-47317815	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs537993942	chr16:47317869-47317870	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs370897522	chr16:47317991-47317992	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs200019480	chr16:47318001-47318002	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs200585253	chr16:47318004-47318005	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs556232900	chr16:47318010-47318011	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs568034153	chr16:47318023-47318024	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs535511732	chr16:47318058-47318059	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs139103351	chr16:47318070-47318071	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs376419817	chr16:47318081-47318082	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs571697880	chr16:47318145-47318146	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs534264944	chr16:47318200-47318201	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs370883027	chr16:47318207-47318208	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs558777017	chr16:47318229-47318230	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs149895110	chr16:47318335-47318336	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs143877646	chr16:47318358-47318359	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs190658012	chr16:47318362-47318363	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs180997085	chr16:47318369-47318370	ZNF genes & repeats Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs148599451	chr16:47318495-47318496	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs542295933	chr16:47318561-47318562	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs560514294	chr16:47318599-47318600	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs527684592	chr16:47318621-47318622	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs28495596	chr16:47318750-47318751	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Wilms tumour	21544195	CNVD
Cancer	20164920	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Renal cell carcinoma	18765545	CNVD
Sudden cardiac death	19188705	CNVD
Multiple myeloma	16616336	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Breast cancer	21364760	CNVD
Ewing''s sarcoma	17952124	CNVD
Myelofibrosis	22110671	CNVD
Attention deficit hyperactivity disorder	21324949	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21509527	CNVD
Bladder cancer	21909424	CNVD
Colorectal cancer	19359472	CNVD
Olfactory neuroblastoma	18408657	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	22341455	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:2160 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:47230000-47332600	Weak transcription	Thymus	Thymus
2	chr16:47264200-47321000	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr16:47282200-47321000	Weak transcription	Brain Hippocampus Middle	brain
4	chr16:47289200-47320600	Weak transcription	Small Intestine	intestine
5	chr16:47292200-47317400	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr16:47292200-47345600	Weak transcription	K562	blood
7	chr16:47292400-47317400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr16:47292400-47317400	Weak transcription	HSMM	muscle
9	chr16:47292600-47317200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr16:47292600-47317200	Weak transcription	Dnd41	blood
11	chr16:47292600-47317200	Weak transcription	HepG2	liver
12	chr16:47294600-47319600	Weak transcription	Primary T helper cells fromperipheralblood	blood
13	chr16:47294600-47332600	Weak transcription	Pancreas	Pancrea
14	chr16:47294800-47332600	Weak transcription	Ovary	ovary
15	chr16:47295200-47317200	Weak transcription	Liver	Liver
16	chr16:47295200-47317400	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr16:47297400-47317200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr16:47297400-47317200	Weak transcription	Adipose Nuclei	Adipose
19	chr16:47297400-47317200	Weak transcription	Left Ventricle	heart
20	chr16:47297400-47319000	Weak transcription	Fetal Stomach	stomach
21	chr16:47297400-47319400	Weak transcription	Lung	lung
22	chr16:47297600-47317200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr16:47297600-47317400	Weak transcription	Fetal Intestine Large	intestine
24	chr16:47297600-47333200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr16:47304600-47317200	Weak transcription	Primary B cells from cord blood	blood
26	chr16:47304800-47317400	Weak transcription	Primary T cells from cord blood	blood
27	chr16:47305400-47332400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chr16:47305400-47332400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr16:47306200-47317200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr16:47307200-47332400	Weak transcription	Monocytes-CD14+_RO01746	blood
31	chr16:47307400-47325600	Weak transcription	Primary T cells fromperipheralblood	blood
32	chr16:47308800-47319000	Weak transcription	Rectal Smooth Muscle	rectum
33	chr16:47311400-47341800	Weak transcription	Skeletal Muscle Male	skeletal muscle
34	chr16:47311400-47362200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
35	chr16:47313400-47319000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
36	chr16:47314000-47333800	Weak transcription	Rectal Mucosa Donor 31	rectum
37	chr16:47314200-47319600	Weak transcription	Duodenum Mucosa	Duodenum
38	chr16:47314800-47324000	Weak transcription	Aorta	Aorta
39	chr16:47315800-47318800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr16:47316000-47317800	Weak transcription	Cortex derived primary cultured neurospheres	brain
41	chr16:47316600-47318200	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr16:47316600-47319200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
43	chr16:47316800-47317200	Weak transcription	Primary hematopoietic stem cells	blood
44	chr16:47317200-47317400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
45	chr16:47317200-47317600	ZNF genes & repeats	Left Ventricle	heart
46	chr16:47317200-47318000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr16:47317200-47318200	ZNF genes & repeats	Primary B cells from cord blood	blood
48	chr16:47317200-47318200	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
49	chr16:47317200-47318600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr16:47317200-47319000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links