Variant report
Variant | nsv429839 |
---|---|
Chromosome Location | chr8:2796813-3024143 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:595)
- CpG islands (count:1038)
- Chromatin interactive region (count:45)
- LncRNA region (count:2)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:2965096-2966032 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr8:2965509-2965847 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr8:2856155-2856419 | K562 | blood: | n/a | n/a |
4 | ATF2 | chr8:2916177-2916545 | H1-hESC | embryonic stem cell: | n/a | n/a |
5 | ATF3 | chr8:2842826-2843057 | K562 | blood: | n/a | n/a |
6 | ATF3 | chr8:2965422-2965838 | K562 | blood: | n/a | n/a |
7 | BACH1 | chr8:2916230-2916576 | H1-hESC | embryonic stem cell: | n/a | n/a |
8 | BACH1 | chr8:2922469-2922529 | K562 | blood: | n/a | n/a |
9 | BACH1 | chr8:2918202-2918564 | H1-hESC | embryonic stem cell: | n/a | n/a |
10 | BACH1 | chr8:3000086-3000145 | K562 | blood: | n/a | n/a |
11 | BACH1 | chr8:2937618-2937797 | K562 | blood: | n/a | n/a |
12 | BACH1 | chr8:2843082-2843370 | H1-hESC | embryonic stem cell: | n/a | chr8:2843219-2843233 |
13 | BATF | chr8:2964313-2964509 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr8:2882522-2882786 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr8:2851732-2852076 | GM12878 | blood: | n/a | n/a |
16 | BCL11A | chr8:2882534-2882878 | GM12878 | blood: | n/a | n/a |
17 | BHLHE40 | chr8:2996065-2996299 | K562 | blood: | n/a | n/a |
18 | BHLHE40 | chr8:2851861-2852089 | GM12878 | blood: | n/a | chr8:2852033-2852046 chr8:2852034-2852043 |
19 | BHLHE40 | chr8:3009535-3009884 | K562 | blood: | n/a | n/a |
20 | BHLHE40 | chr8:2965476-2965859 | K562 | blood: | n/a | n/a |
21 | BHLHE40 | chr8:3000304-3000431 | K562 | blood: | n/a | n/a |
22 | BHLHE40 | chr8:2842702-2843334 | K562 | blood: | n/a | n/a |
23 | BHLHE40 | chr8:3016188-3016208 | K562 | blood: | n/a | n/a |
24 | BHLHE40 | chr8:3021027-3021615 | K562 | blood: | n/a | n/a |
25 | BHLHE40 | chr8:2842852-2842945 | GM12878 | blood: | n/a | n/a |
26 | BHLHE40 | chr8:3005906-3006185 | K562 | blood: | n/a | n/a |
27 | CBX3 | chr8:3009569-3009811 | K562 | blood: | n/a | n/a |
28 | CBX3 | chr8:2956908-2957301 | K562 | blood: | n/a | n/a |
29 | CBX3 | chr8:2842691-2843075 | K562 | blood: | n/a | n/a |
30 | CCNT2 | chr8:2965497-2965876 | K562 | blood: | n/a | chr8:2965696-2965716 |
31 | CCNT2 | chr8:3009480-3009871 | K562 | blood: | n/a | chr8:3009721-3009741 |
32 | CEBPB | chr8:2954721-2955095 | HepG2 | liver: | n/a | chr8:2954924-2954937 chr8:2954856-2954869 chr8:2954924-2954935 chr8:2954925-2954936 |
33 | CEBPB | chr8:2865627-2865770 | K562 | blood: | n/a | n/a |
34 | CEBPB | chr8:2951403-2951452 | A549 | lung: | n/a | chr8:2951435-2951446 |
35 | CEBPB | chr8:2954868-2954947 | H1-hESC | embryonic stem cell: | n/a | chr8:2954924-2954937 chr8:2954924-2954935 chr8:2954925-2954936 |
36 | CEBPB | chr8:2954719-2955032 | A549 | lung: | n/a | chr8:2954924-2954937 chr8:2954856-2954869 chr8:2954924-2954935 chr8:2954925-2954936 |
37 | CEBPB | chr8:2954748-2955039 | IMR90 | lung: | n/a | chr8:2954924-2954937 chr8:2954856-2954869 chr8:2954924-2954935 chr8:2954925-2954936 |
38 | CEBPB | chr8:2954734-2954993 | Hela-S3 | cervix: | n/a | chr8:2954924-2954937 chr8:2954856-2954869 chr8:2954924-2954935 chr8:2954925-2954936 |
39 | CEBPB | chr8:3009267-3010011 | K562 | blood: | n/a | chr8:3009954-3009967 |
40 | CEBPB | chr8:2811413-2811664 | HepG2 | liver: | n/a | n/a |
41 | CEBPB | chr8:3003941-3004174 | HepG2 | liver: | n/a | chr8:3004049-3004060 |
42 | CEBPB | chr8:2865620-2865694 | HepG2 | liver: | n/a | n/a |
43 | CEBPB | chr8:2842695-2843052 | K562 | blood: | n/a | n/a |
44 | CEBPB | chr8:2886397-2886623 | IMR90 | lung: | n/a | n/a |
45 | CEBPB | chr8:2931331-2931584 | A549 | lung: | n/a | n/a |
46 | CEBPB | chr8:2952827-2952942 | K562 | blood: | n/a | n/a |
47 | CEBPB | chr8:2916260-2916546 | H1-hESC | embryonic stem cell: | n/a | n/a |
48 | CEBPB | chr8:2926963-2927222 | K562 | blood: | n/a | n/a |
49 | CEBPB | chr8:2965332-2965758 | K562 | blood: | n/a | n/a |
50 | CEBPB | chr8:2849688-2849954 | A549 | lung: | n/a | chr8:2849859-2849870 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:2798026-2798076 | RPTEC | kidney: | n/a |
2 | chr8:2798026-2798076 | RPTEC | kidney: | n/a |
3 | chr8:2997052-2997102 | CMK | blood: | n/a |
4 | chr8:2885516-2885566 | AG04449 | skin: | fetal |
5 | chr8:3016640-3016690 | HCT-116 | colon: | n/a |
6 | chr8:2997052-2997102 | A549 | lung: | n/a |
7 | chr8:2960317-2960367 | HRE | kidney: | n/a |
8 | chr8:2997052-2997102 | HCM | heart: | n/a |
9 | chr8:2990464-2990514 | SKMC | muscle: | n/a |
10 | chr8:2997052-2997102 | H1-hESC | embryonic stem cell: | embryo |
11 | chr8:2820857-2820907 | SK-N-SH | brain: | n/a |
12 | chr8:2879687-2879737 | ovcar-3 | ovarian: | n/a |
13 | chr8:2960317-2960367 | NT2-D1 | testis: | n/a |
14 | chr8:2885537-2885587 | ProgFib | skin: | n/a |
15 | chr8:2883914-2883964 | ProgFib | skin: | n/a |
16 | chr8:2960317-2960367 | HCF | heart: | n/a |
17 | chr8:2877217-2877267 | T-47D | breast: | n/a |
18 | chr8:2831994-2832044 | PANC-1 | pancreas: | n/a |
19 | chr8:2885537-2885587 | HUVEC | blood vessel: | n/a |
20 | chr8:3016640-3016690 | PrEC | prostate: | n/a |
21 | chr8:2990464-2990514 | HAEpiC | amniotic membrane: | n/a |
22 | chr8:2997052-2997102 | PFSK-1 | brain: | n/a |
23 | chr8:2832078-2832128 | GM12878 | blood: | n/a |
24 | chr8:2820857-2820907 | GM12891 | blood: | n/a |
25 | chr8:2885516-2885566 | U87 | brain: | n/a |
26 | chr8:2885537-2885587 | MCF10A-Er-Src | breast: | n/a |
27 | chr8:2831994-2832044 | HRCEpiC | kidney: | n/a |
28 | chr8:2831994-2832044 | HRPEpiC | eye: | n/a |
29 | chr8:3016640-3016690 | GM19239 | blood: | n/a |
30 | chr8:2831994-2832044 | HCF | heart: | n/a |
31 | chr8:2832078-2832128 | HEEpiC | esophagus: | n/a |
32 | chr8:2832048-2832098 | PFSK-1 | brain: | n/a |
33 | chr8:2879687-2879737 | BJ | skin: | n/a |
34 | chr8:2885627-2885677 | AG09309 | skin: | n/a |
35 | chr8:2883914-2883964 | SK-N-SH_RA | brain: | n/a |
36 | chr8:2883914-2883964 | MCF-7 | breast: | n/a |
37 | chr8:2885627-2885677 | IMR90 | lung: | fetal |
38 | chr8:2885516-2885566 | SK-N-SH_RA | brain: | n/a |
39 | chr8:2798026-2798076 | HEK293 | kidney: | embryo |
40 | chr8:2916814-2916864 | HIPEpiC | eye: | n/a |
41 | chr8:2997052-2997102 | SK-N-SH | brain: | n/a |
42 | chr8:2832078-2832128 | HNPCEpiC | eye: | n/a |
43 | chr8:2831994-2832044 | BE2_C | brain: | n/a |
44 | chr8:2885537-2885587 | HMEC | breast: | n/a |
45 | chr8:2885627-2885677 | LNCaP | prostate: | n/a |
46 | chr8:2997052-2997102 | AoSMC | blood vessel: | n/a |
47 | chr8:2879917-2879967 | AG10803 | skin: | n/a |
48 | chr8:2798026-2798076 | HepG2 | liver: | n/a |
49 | chr8:2831994-2832044 | LNCaP | prostate: | n/a |
50 | chr8:2885516-2885566 | SAEC | small airway: | n/a |
(count:45 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:56367505..56368235-chr8:2894157..2894798,2 | MCF-7 | breast: | |
2 | chr8:2828762..2830879-chr8:2834821..2837068,2 | K562 | blood: | |
3 | chr8:2884129..2886374-chr8:2888333..2890117,2 | K562 | blood: | |
4 | chr8:2807090..2809618-chr8:2810131..2812538,2 | K562 | blood: | |
5 | chr8:2994979..2996724-chr8:3012349..3015232,2 | K562 | blood: | |
6 | chr8:2884129..2886374-chr8:2888333..2890117,2 | K562 | blood: | |
7 | chr8:2956076..2958014-chr8:2965704..2967882,2 | K562 | blood: | |
8 | chr8:2920157..2922787-chr8:2924910..2926529,2 | K562 | blood: | |
9 | chr8:2956076..2958014-chr8:2965704..2967882,2 | K562 | blood: | |
10 | chr8:2910108..2911963-chr8:2912249..2914943,2 | K562 | blood: | |
11 | chr8:2920157..2922787-chr8:2924910..2926529,2 | K562 | blood: | |
12 | chr8:3012415..3014148-chr8:3015659..3017279,2 | K562 | blood: | |
13 | chr8:2829379..2830950-chr8:2834355..2837068,2 | K562 | blood: | |
14 | chr8:2949313..2951484-chr8:2956361..2958211,2 | K562 | blood: | |
15 | chr8:3004483..3006837-chr8:3020468..3022186,2 | K562 | blood: | |
16 | chr8:3012415..3014148-chr8:3015659..3017279,2 | K562 | blood: | |
17 | chr8:2913080..2916209-chr8:2916693..2920762,3 | K562 | blood: | |
18 | chr8:2807090..2809618-chr8:2810131..2812538,2 | K562 | blood: | |
19 | chr8:2783957..2786248-chr8:2796648..2799482,2 | K562 | blood: | |
20 | chr8:2832391..2834459-chr8:2835771..2837988,2 | K562 | blood: | |
21 | chr8:2913080..2916209-chr8:2916693..2920762,3 | K562 | blood: | |
22 | chr8:2910108..2911963-chr8:2912249..2914943,2 | K562 | blood: | |
23 | chr8:2924503..2926165-chr8:2927948..2929693,2 | K562 | blood: | |
24 | chr8:2865247..2867969-chr8:2868176..2872126,4 | K562 | blood: | |
25 | chr8:2994979..2996724-chr8:3012349..3015232,2 | K562 | blood: | |
26 | chr8:2924503..2926165-chr8:2927948..2929693,2 | K562 | blood: | |
27 | chr8:2934204..2935975-chr8:2939449..2941530,2 | K562 | blood: | |
28 | chr8:2893385..2895332-chr8:2897701..2899292,2 | K562 | blood: | |
29 | chr8:2934204..2935975-chr8:2939449..2941530,2 | K562 | blood: | |
30 | chr8:2949313..2951484-chr8:2956361..2958211,2 | K562 | blood: | |
31 | chr8:2822063..2824754-chr8:2827562..2829659,2 | K562 | blood: | |
32 | chr8:2832391..2834459-chr8:2835771..2837988,2 | K562 | blood: | |
33 | chr8:3004483..3006837-chr8:3020468..3022186,2 | K562 | blood: | |
34 | chr8:2923421..2926165-chr8:2927948..2929676,2 | K562 | blood: | |
35 | chr8:2943250..2945425-chr8:2952775..2955064,2 | K562 | blood: | |
36 | chr8:2865247..2867969-chr8:2868176..2872126,4 | K562 | blood: | |
37 | chr8:2790313..2793074-chr8:2794638..2796914,2 | K562 | blood: | |
38 | chr8:2822063..2824754-chr8:2827562..2829659,2 | K562 | blood: | |
39 | chr8:2917024..2919683-chr8:2921100..2923818,2 | K562 | blood: | |
40 | chr8:2943250..2945425-chr8:2952775..2955064,2 | K562 | blood: | |
41 | chr8:2893385..2895332-chr8:2897701..2899292,2 | K562 | blood: | |
42 | chr8:2828762..2830879-chr8:2834821..2837068,2 | K562 | blood: | |
43 | chr8:2917024..2919683-chr8:2921100..2923818,2 | K562 | blood: | |
44 | chr8:2829379..2830950-chr8:2834355..2837068,2 | K562 | blood: | |
45 | chr8:2923421..2926165-chr8:2927948..2929676,2 | K562 | blood: |
(count:2 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-MYOM2-14 | chr8:2879062-2880003 | NONHSAT124740 |
2 | lnc-MYOM2-14 | chr8:2877373-2877426 | NONHSAT124740 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CSMD1 | TF binding region |
CSMD1 | CpG island |
ENSG00000111540 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs535642508 | chr8:2796814-2796815 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs146589471 | chr8:2796832-2796833 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs186685133 | chr8:2796839-2796840 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs141297133 | chr8:2796856-2796857 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs571146081 | chr8:2796874-2796875 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs557693975 | chr8:2796876-2796877 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs375451406 | chr8:2796879-2796880 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs577957038 | chr8:2796886-2796887 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs372397366 | chr8:2796887-2796888 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs560395598 | chr8:2796947-2796948 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs35744525 | chr8:2796949-2796950 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs191139900 | chr8:2796967-2796968 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs542804643 | chr8:2796975-2796976 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs34574904 | chr8:2796977-2796978 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs76931398 | chr8:2796980-2796981 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs552833871 | chr8:2797023-2797024 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs558557508 | chr8:2797045-2797046 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs598985 | chr8:2797092-2797093 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
19 | rs150200793 | chr8:2797109-2797110 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs184062045 | chr8:2797113-2797114 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs599016 | chr8:2797119-2797120 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
22 | rs568395896 | chr8:2797131-2797132 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs574592168 | chr8:2797143-2797144 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs117580024 | chr8:2797167-2797168 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs665045 | chr8:2797172-2797173 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
26 | rs549136229 | chr8:2797188-2797189 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs370079087 | chr8:2797189-2797190 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs138685672 | chr8:2797190-2797191 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs599814 | chr8:2797246-2797247 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
30 | rs13255958 | chr8:2797258-2797259 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs13264537 | chr8:2797259-2797260 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs534190379 | chr8:2797313-2797314 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs569896681 | chr8:2797322-2797323 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs34436000 | chr8:2797327-2797328 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs553889450 | chr8:2797329-2797330 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs77683819 | chr8:2797336-2797337 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs576703881 | chr8:2797350-2797351 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs545809260 | chr8:2797393-2797394 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs34562041 | chr8:2797418-2797419 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs73179572 | chr8:2797428-2797429 | Enhancers Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs149012471 | chr8:2797431-2797432 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs545269831 | chr8:2797459-2797460 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs571922915 | chr8:2797479-2797480 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs528589847 | chr8:2797492-2797493 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs564983378 | chr8:2797502-2797503 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs143792604 | chr8:2797601-2797602 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs540973955 | chr8:2797613-2797614 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs193186024 | chr8:2797636-2797637 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs534370755 | chr8:2797641-2797642 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs138484077 | chr8:2797647-2797648 | Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Prostate cancer | 16573809 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
abnormal development | 18461090 | CNVD |
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Cancer | 20164919 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Epilepsy | 22083797 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Autism | 22495311 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Ovarian cancer | 22355333 | CNVD |
Breast cancer | 21364760 | CNVD |
Cancer | 20164920 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Prostate cancer | 17217626 | CNVD |
Developmental delay | 19128483 | CNVD |
Neuroticism | 17667963 | CNVD |
Leukoplakia | 24403051 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Lung cancer | 18438408 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 19805367 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Colorectal cancer | 21645411 | CNVD |
Colorectal cancer | 22014273 | CNVD |
Breast cancer | 22522925 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:2792800-2842800 | Weak transcription | K562 | blood |
2 | chr8:2797400-2798000 | Enhancers | H1 Cell Line | embryonic stem cell |
3 | chr8:2797400-2798200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
4 | chr8:2797400-2798400 | Enhancers | HUES48 Cell Line | embryonic stem cell |
5 | chr8:2797600-2798000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
6 | chr8:2797600-2798000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
7 | chr8:2797600-2798400 | Enhancers | HUES6 Cell Line | embryonic stem cell |
8 | chr8:2797600-2798400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
9 | chr8:2797600-2798400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
10 | chr8:2797800-2798000 | Bivalent Enhancer | iPS-15b Cell Line | embryonic stem cell |
11 | chr8:2798000-2798400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
12 | chr8:2800600-2836800 | Weak transcription | Brain Inferior Temporal Lobe | brain |
13 | chr8:2804200-2812600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
14 | chr8:2810200-2810600 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
15 | chr8:2811200-2836800 | Weak transcription | Brain Anterior Caudate | brain |
16 | chr8:2811800-2836800 | Weak transcription | Brain Cingulate Gyrus | brain |
17 | chr8:2812400-2813200 | Enhancers | H9 Cell Line | embryonic stem cell |
18 | chr8:2812400-2853000 | Weak transcription | Brain Angular Gyrus | brain |
19 | chr8:2812600-2813200 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
20 | chr8:2813200-2819600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
21 | chr8:2815200-2816600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
22 | chr8:2815200-2816800 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
23 | chr8:2815800-2816000 | Enhancers | Fetal Muscle Leg | muscle |
24 | chr8:2816600-2816800 | Enhancers | Fetal Muscle Leg | muscle |
25 | chr8:2819600-2820800 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
26 | chr8:2820400-2824000 | Weak transcription | Fetal Muscle Trunk | muscle |
27 | chr8:2820800-2832600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
28 | chr8:2823600-2824400 | Enhancers | Fetal Muscle Leg | muscle |
29 | chr8:2824000-2824400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
30 | chr8:2824000-2824400 | Enhancers | Fetal Muscle Trunk | muscle |
31 | chr8:2824200-2825600 | Enhancers | Brain Germinal Matrix | brain |
32 | chr8:2824600-2825000 | Enhancers | Pancreatic Islets | Pancreatic Islet |
33 | chr8:2824800-2825000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
34 | chr8:2825000-2836600 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
35 | chr8:2833800-2834200 | Enhancers | Fetal Muscle Trunk | muscle |
36 | chr8:2834000-2834200 | Enhancers | Fetal Muscle Leg | muscle |
37 | chr8:2834200-2835600 | Weak transcription | Lung | lung |
38 | chr8:2834200-2836000 | Weak transcription | Fetal Muscle Leg | muscle |
39 | chr8:2834200-2840000 | Weak transcription | Fetal Muscle Trunk | muscle |
40 | chr8:2835600-2836000 | ZNF genes & repeats | Lung | lung |
41 | chr8:2836000-2839000 | Enhancers | Fetal Muscle Leg | muscle |
42 | chr8:2836600-2838000 | Enhancers | Cortex derived primary cultured neurospheres | brain |
43 | chr8:2836800-2837400 | Enhancers | Brain Cingulate Gyrus | brain |
44 | chr8:2836800-2837600 | Enhancers | Brain Hippocampus Middle | brain |
45 | chr8:2836800-2837800 | Enhancers | Brain Inferior Temporal Lobe | brain |
46 | chr8:2836800-2837800 | Enhancers | Brain Substantia Nigra | brain |
47 | chr8:2836800-2838000 | Enhancers | Brain Anterior Caudate | brain |
48 | chr8:2837000-2837800 | Enhancers | Brain Germinal Matrix | brain |
49 | chr8:2837000-2837800 | Weak transcription | Lung | lung |
50 | chr8:2837000-2838000 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |