Variant report

Variant	nsv430264
Chromosome Location	chr10:112277340-112415418
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3916)
CpG islands
(count:2811)
Chromatin interactive
region (count:161)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:3916 , 50 per page) page: 1 2 3 4 5 6 7 ... 79

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:112369792-112370394	K562	blood:	n/a	n/a
2	ARID3A	chr10:112406916-112407168	K562	blood:	n/a	n/a
3	ARID3A	chr10:112295767-112295964	K562	blood:	n/a	n/a
4	ARID3A	chr10:112326771-112327434	HepG2	liver:	n/a	chr10:112327158-112327166
5	ARID3A	chr10:112326872-112327491	K562	blood:	n/a	chr10:112327158-112327166
6	ARID3A	chr10:112401145-112401434	K562	blood:	n/a	n/a
7	ARID3A	chr10:112316814-112317094	HepG2	liver:	n/a	n/a
8	ARID3A	chr10:112411396-112411508	K562	blood:	n/a	n/a
9	ARID3A	chr10:112360234-112360600	HepG2	liver:	n/a	n/a
10	ARID3A	chr10:112406674-112406691	K562	blood:	n/a	n/a
11	ARID3A	chr10:112360338-112360617	K562	blood:	n/a	n/a
12	ARID3A	chr10:112329428-112330003	HepG2	liver:	n/a	n/a
13	ARID3A	chr10:112282425-112282706	HepG2	liver:	n/a	n/a
14	ARID3A	chr10:112306993-112307287	HepG2	liver:	n/a	n/a
15	ARID3A	chr10:112406114-112406462	K562	blood:	n/a	n/a
16	ARID3A	chr10:112376336-112376802	K562	blood:	n/a	n/a
17	ATF1	chr10:112409912-112410284	K562	blood:	n/a	n/a
18	ATF2	chr10:112295561-112296616	GM12878	blood:	n/a	n/a
19	ATF2	chr10:112326673-112327272	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF2	chr10:112372948-112374220	GM12878	blood:	n/a	n/a
21	ATF2	chr10:112313542-112314005	H1-hESC	embryonic stem cell:	n/a	n/a
22	ATF2	chr10:112288566-112289702	GM12878	blood:	n/a	n/a
23	ATF2	chr10:112295486-112296705	GM12878	blood:	n/a	n/a
24	ATF2	chr10:112289262-112289810	GM12878	blood:	n/a	n/a
25	ATF2	chr10:112316835-112317153	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr10:112289281-112289621	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF2	chr10:112288482-112289212	GM12878	blood:	n/a	n/a
28	ATF2	chr10:112372999-112374101	GM12878	blood:	n/a	n/a
29	ATF2	chr10:112326541-112327656	H1-hESC	embryonic stem cell:	n/a	n/a
30	ATF2	chr10:112326870-112327641	GM12878	blood:	n/a	n/a
31	ATF2	chr10:112326890-112327638	GM12878	blood:	n/a	n/a
32	ATF3	chr10:112401024-112401323	K562	blood:	n/a	chr10:112401185-112401194
33	ATF3	chr10:112400831-112401622	A549	lung:	n/a	chr10:112401185-112401194
34	ATF3	chr10:112326672-112327723	A549	lung:	n/a	n/a
35	ATF3	chr10:112326881-112327233	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF3	chr10:112326990-112327189	HepG2	liver:	n/a	n/a
37	ATF3	chr10:112401009-112401267	K562	blood:	n/a	chr10:112401185-112401194
38	ATF3	chr10:112326924-112327252	GM12878	blood:	n/a	n/a
39	ATF3	chr10:112326978-112327195	K562	blood:	n/a	n/a
40	ATF3	chr10:112326821-112327505	A549	lung:	n/a	n/a
41	BACH1	chr10:112396916-112397229	H1-hESC	embryonic stem cell:	n/a	n/a
42	BACH1	chr10:112403060-112404248	H1-hESC	embryonic stem cell:	n/a	n/a
43	BACH1	chr10:112289414-112289780	H1-hESC	embryonic stem cell:	n/a	n/a
44	BACH1	chr10:112315689-112315778	H1-hESC	embryonic stem cell:	n/a	n/a
45	BACH1	chr10:112290025-112290233	H1-hESC	embryonic stem cell:	n/a	n/a
46	BATF	chr10:112295769-112296124	GM12878	blood:	n/a	n/a
47	BATF	chr10:112288756-112289078	GM12878	blood:	n/a	n/a
48	BATF	chr10:112373682-112374118	GM12878	blood:	n/a	n/a
49	BATF	chr10:112373433-112374211	GM12878	blood:	n/a	n/a
50	BATF	chr10:112295672-112296406	GM12878	blood:	n/a	n/a

(count:2811 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:112400453-112400503	BE2_C	brain:	n/a
2	chr10:112290177-112290227	HL-60	blood:	n/a
3	chr10:112408153-112408203	Caco-2	colon:	n/a
4	chr10:112336155-112336205	GM12891	blood:	n/a
5	chr10:112289853-112289903	ProgFib	skin:	n/a
6	chr10:112400453-112400503	BE2_C	brain:	n/a
7	chr10:112290177-112290227	HL-60	blood:	n/a
8	chr10:112408153-112408203	Caco-2	colon:	n/a
9	chr10:112336155-112336205	GM12891	blood:	n/a
10	chr10:112289853-112289903	ProgFib	skin:	n/a
11	chr10:112404738-112404788	NB4	blood:	n/a
12	chr10:112327411-112327461	Caco-2	colon:	n/a
13	chr10:112404346-112404396	SKMC	muscle:	n/a
14	chr10:112404997-112405047	HRCEpiC	kidney:	n/a
15	chr10:112290002-112290052	HRCEpiC	kidney:	n/a
16	chr10:112327600-112327650	HIPEpiC	eye:	n/a
17	chr10:112403955-112404005	SKMC	muscle:	n/a
18	chr10:112290177-112290227	NT2-D1	testis:	n/a
19	chr10:112371252-112371302	HRCEpiC	kidney:	n/a
20	chr10:112404774-112404824	NB4	blood:	n/a
21	chr10:112402954-112403004	PFSK-1	brain:	n/a
22	chr10:112314416-112314466	MCF10A-Er-Src	breast:	n/a
23	chr10:112404774-112404824	AG09319	gingival:	n/a
24	chr10:112403448-112403498	RPTEC	kidney:	n/a
25	chr10:112328140-112328190	GM12892	blood:	n/a
26	chr10:112402954-112403004	IMR90	lung:	fetal
27	chr10:112290177-112290227	MCF-7	breast:	n/a
28	chr10:112403098-112403148	RPTEC	kidney:	n/a
29	chr10:112290198-112290248	HNPCEpiC	eye:	n/a
30	chr10:112327281-112327331	T-47D	breast:	n/a
31	chr10:112327234-112327284	PrEC	prostate:	n/a
32	chr10:112289853-112289903	HCT-116	colon:	n/a
33	chr10:112410313-112410363	NHDF-neo	bronchial:	n/a
34	chr10:112327281-112327331	CMK	blood:	n/a
35	chr10:112404438-112404488	NHBE	bronchial:	n/a
36	chr10:112403495-112403545	Caco-2	colon:	n/a
37	chr10:112404997-112405047	HEEpiC	esophagus:	n/a
38	chr10:112410313-112410363	MCF-7	breast:	n/a
39	chr10:112402748-112402798	AoSMC	blood vessel:	n/a
40	chr10:112290055-112290105	HCM	heart:	n/a
41	chr10:112404438-112404488	HRPEpiC	eye:	n/a
42	chr10:112290055-112290105	HEEpiC	esophagus:	n/a
43	chr10:112293247-112293297	PANC-1	pancreas:	n/a
44	chr10:112289853-112289903	MCF-7	breast:	n/a
45	chr10:112327979-112328029	HRPEpiC	eye:	n/a
46	chr10:112290002-112290052	GM12878	blood:	n/a
47	chr10:112327281-112327331	HEK293	kidney:	embryo
48	chr10:112403955-112404005	NHDF-neo	bronchial:	n/a
49	chr10:112314416-112314466	K562	blood:	n/a
50	chr10:112327249-112327299	NB4	blood:	n/a

(count:161 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr10:112369174..112370718-chr10:112440045..112441481,8	MCF-7	breast:
2	chr10:112113770..112114431-chr10:112306321..112307566,4	MCF-7	breast:
3	chr10:112338365..112340734-chr10:112345477..112347966,2	MCF-7	breast:
4	chr10:112326435..112327406-chr5:149588427..149589263,2	Hela-S3	cervix:
5	chr10:112260858..112263690-chr10:112326763..112328901,2	K562	blood:
6	chr10:112396342..112398390-chr10:112406266..112408100,2	K562	blood:
7	chr10:112362174..112364106-chr10:112366559..112369366,2	K562	blood:
8	chr10:112065998..112066592-chr10:112360017..112360864,2	MCF-7	breast:
9	chr10:112071073..112073007-chr10:112360122..112361641,2	MCF-7	breast:
10	chr10:112406795..112411184-chr10:112421685..112425384,5	K562	blood:
11	chr10:112306573..112311339-chr10:112325875..112328536,4	K562	blood:
12	chr10:112361402..112363678-chr10:112626745..112629096,2	K562	blood:
13	chr10:112369719..112370350-chr10:113119845..113120779,2	MCF-7	breast:
14	chr10:112318111..112320656-chr10:112320714..112322297,2	MCF-7	breast:
15	chr10:112253275..112255461-chr10:112281701..112284402,2	K562	blood:
16	chr10:112370023..112373951-chr10:112374554..112377342,3	K562	blood:
17	chr10:112325927..112328552-chr10:112333741..112336807,4	MCF-7	breast:
18	chr10:112070809..112071380-chr10:112359930..112360538,2	K562	blood:
19	chr10:112370054..112370635-chr10:112505864..112506381,2	MCF-7	breast:
20	chr10:112274583..112276403-chr10:112285968..112288714,2	MCF-7	breast:
21	chr10:112113662..112114296-chr10:112306997..112307593,2	MCF-7	breast:
22	chr10:112370023..112371667-chr10:112374663..112376446,2	K562	blood:
23	chr10:112379798..112382716-chr10:112387123..112389421,3	MCF-7	breast:
24	chr10:112410966..112413464-chr10:112415119..112417758,2	K562	blood:
25	chr10:112388894..112391339-chr10:112399780..112401303,2	K562	blood:
26	chr10:112062250..112064734-chr10:112321660..112324086,2	K562	blood:
27	chr10:112295053..112298461-chr10:112300799..112303080,3	K562	blood:
28	chr10:112380430..112382366-chr10:112385657..112388142,2	K562	blood:
29	chr10:112259576..112262058-chr10:112281920..112283999,3	MCF-7	breast:
30	chr10:112257166..112259341-chr10:112304031..112306714,3	K562	blood:
31	chr10:111967881..111970077-chr10:112327423..112329397,2	K562	blood:
32	chr10:112410120..112413208-chr10:112417857..112422118,3	K562	blood:
33	chr10:112281791..112283682-chr10:112285969..112287599,2	MCF-7	breast:
34	chr10:112066011..112066639-chr10:112295767..112296671,2	K562	blood:
35	chr10:112369770..112370322-chr10:112505825..112506469,2	K562	blood:
36	chr10:112397294..112401107-chr10:112402533..112405885,7	K562	blood:
37	chr10:112362098..112363067-chr10:112378636..112379250,2	K562	blood:
38	chr10:112259698..112261838-chr10:112286490..112289289,2	K562	blood:
39	chr10:112406131..112407752-chr10:112631754..112633641,2	K562	blood:
40	chr10:112325389..112328021-chr10:112354273..112356565,2	K562	blood:
41	chr10:112286162..112289044-chr10:112326498..112328769,2	MCF-7	breast:
42	chr10:112255572..112259764-chr10:112325776..112329324,5	K562	blood:
43	chr10:112328738..112331511-chr10:112359320..112360833,2	MCF-7	breast:
44	chr10:112313921..112316379-chr10:112327389..112328959,2	MCF-7	breast:
45	chr10:112338976..112341767-chr10:112504004..112506864,2	K562	blood:
46	chr10:112330851..112333264-chr10:112342651..112345057,2	K562	blood:
47	chr10:112338365..112340734-chr10:112345477..112347966,2	MCF-7	breast:
48	chr10:112070494..112071745-chr10:112306603..112307601,7	MCF-7	breast:
49	chr10:112316550..112317173-chr10:112359994..112360510,2	MCF-7	breast:
50	chr10:112340582..112342798-chr10:112345976..112348403,2	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SMC3-1	chr10:112307061-112307703	XLOC_008611
2	lnc-SMC3-1	chr10:112307061-112307703	XLOC_008611
3	lnc-DUSP5-4	chr10:112297051-112297494	l_374_chr10:112296227-112297494_testes
4	lnc-SMNDC1-6	chr10:112309873-112310612	NONHSAT016350
5	lnc-SMC3-1	chr10:112305413-112305446	XLOC_008611
6	lnc-BBIP1-7	chr10:112367422-112367756	NONHSAT016352
7	lnc-DUSP5-2	chr10:112284813-112285156	NONHSAT016347
8	lnc-SMC3-1	chr10:112306238-112306418	XLOC_008611
9	lnc-DUSP5-4	chr10:112296228-112296408	l_374_chr10:112296227-112297494_testes
10	lnc-BBIP1-6	chr10:112393589-112393883	NONHSAT016353

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	SMC3	hsa-miR-196a-5p	chr10:112364061-112364077
2	SMC3	hsa-miR-340-5p	chr10:112364188-112364209
3	SMC3	hsa-miR-196a-5p	chr10:112364332-112364354
4	SMC3	hsa-miR-340-5p	chr10:112364341-112364362

Variant related genes	Relation type
RPL7P35	TF binding region
ENSG00000239125	TF binding region
RBM20	TF binding region
SMC3	TF binding region
ENSG00000223302	TF binding region
RN7SL686P	TF binding region
RPL7P35	CpG island
ENSG00000239125	CpG island
RBM20	CpG island
SMC3	CpG island
ENSG00000223302	CpG island
RN7SL686P	CpG island
ENSG00000168710	chromatin interactions
ENSG00000119950	chromatin interactions
ENSG00000119953	chromatin interactions
ENSG00000203867	chromatin interactions
ENSG00000239125	chromatin interactions
ENSG00000108061	chromatin interactions
ENSG00000108055	chromatin interactions
ENSG00000214413	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000223302	chromatin interactions
ENSG00000236383	chromatin interactions
ENSG00000203497	chromatin interactions
ENSG00000130706	chromatin interactions
ENSG00000228417	chromatin interactions
ENSG00000150593	chromatin interactions
ENSG00000263919	chromatin interactions
ENSG00000233518	chromatin interactions
ENSG00000152683	chromatin interactions
ENSG00000196262	chromatin interactions
ENSG00000221359	chromatin interactions
ENSG00000138166	chromatin interactions
ENSG00000272716	chromatin interactions
ENSG00000273143	chromatin interactions

Extended variants
information (count: 5513 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:5513 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10884986	chr10:112277340-112277341	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs190352213	chr10:112277358-112277359	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs143723910	chr10:112277362-112277363	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs147221848	chr10:112277410-112277411	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs12269167	chr10:112277425-112277426	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs527345690	chr10:112277467-112277468	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs140459452	chr10:112277495-112277496	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs35655848	chr10:112277498-112277499	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs369291982	chr10:112277503-112277504	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs144437497	chr10:112277511-112277512	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs34102268	chr10:112277536-112277537	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs552994339	chr10:112277554-112277555	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs570612998	chr10:112277582-112277583	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs549583757	chr10:112277685-112277686	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs150842834	chr10:112277696-112277697	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs139293617	chr10:112277746-112277747	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs547327853	chr10:112277750-112277751	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs565959743	chr10:112277792-112277793	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs150021316	chr10:112277793-112277794	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs11812407	chr10:112277815-112277816	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs537570577	chr10:112277891-112277892	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs149140475	chr10:112277909-112277910	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs577557030	chr10:112277985-112277986	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs143853206	chr10:112277998-112277999	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs559800082	chr10:112277999-112278000	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs114260818	chr10:112278081-112278082	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs185767831	chr10:112278096-112278097	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs560908359	chr10:112278103-112278104	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs146884447	chr10:112278156-112278157	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs549499703	chr10:112278224-112278225	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs373713981	chr10:112278243-112278244	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs564628767	chr10:112278289-112278290	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs4918522	chr10:112278336-112278337	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs12357803	chr10:112278449-112278450	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs4918523	chr10:112278494-112278495	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs137990893	chr10:112278567-112278568	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs35110791	chr10:112278574-112278575	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs529974322	chr10:112278585-112278586	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs548166577	chr10:112278594-112278595	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs140645749	chr10:112278597-112278598	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs371582150	chr10:112278641-112278642	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs559142853	chr10:112278644-112278645	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs112629760	chr10:112278652-112278653	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs535242825	chr10:112278656-112278657	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs148147795	chr10:112278657-112278658	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs77611103	chr10:112278679-112278680	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs546387788	chr10:112278778-112278779	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs72832241	chr10:112278788-112278789	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs368318991	chr10:112278887-112278888	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs575672587	chr10:112278925-112278926	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Paraganglioma	17535989	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myxofibrosarcoma	16751306	CNVD
Cornelia de Lange syndrome	24599119	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	16397240	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	16616336	CNVD
Chronic lymphocytic leukemia	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Barrett''s syndrome	19417022	CNVD
Sezary syndrome	18413736	CNVD
Cornelia de Lange syndrome	21085971	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Osteosarcoma	21215367	CNVD

Chromatin state (count:3823 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112263400-112282200	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr10:112265600-112282200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
3	chr10:112266000-112282200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
4	chr10:112267200-112285600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr10:112268200-112287600	Weak transcription	Aorta	Aorta
6	chr10:112268400-112281800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr10:112268600-112289400	Weak transcription	Fetal Lung	lung
8	chr10:112270600-112282000	Weak transcription	Gastric	stomach
9	chr10:112270800-112283200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr10:112271000-112278000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr10:112271000-112281200	Weak transcription	Primary B cells from cord blood	blood
12	chr10:112271000-112281800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
13	chr10:112271000-112282000	Weak transcription	Liver	Liver
14	chr10:112271000-112282200	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
15	chr10:112271000-112282200	Weak transcription	Rectal Mucosa Donor 29	rectum
16	chr10:112271200-112281800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
17	chr10:112271200-112283200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr10:112271200-112283200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr10:112272000-112287600	Weak transcription	H1 Cell Line	embryonic stem cell
20	chr10:112272200-112281600	Weak transcription	Pancreas	Pancrea
21	chr10:112272200-112282200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr10:112272200-112283000	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr10:112272200-112288800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
24	chr10:112272400-112281600	Weak transcription	Duodenum Mucosa	Duodenum
25	chr10:112272400-112289600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
26	chr10:112272600-112277800	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr10:112272600-112283800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr10:112272800-112282000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr10:112272800-112282200	Weak transcription	Sigmoid Colon	Sigmoid Colon
30	chr10:112272800-112288000	Weak transcription	Primary T cells fromperipheralblood	blood
31	chr10:112273000-112283400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr10:112273000-112287400	Weak transcription	HSMMtube	muscle
33	chr10:112273200-112277800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
34	chr10:112273200-112277800	Weak transcription	Thymus	Thymus
35	chr10:112273200-112278000	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
36	chr10:112273200-112278400	Weak transcription	Fetal Stomach	stomach
37	chr10:112273200-112278600	Strong transcription	Muscle Satellite Cultured Cells	--
38	chr10:112273200-112282000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr10:112273200-112282200	Weak transcription	HUVEC	blood vessel
40	chr10:112273200-112285600	Weak transcription	GM12878-XiMat	blood
41	chr10:112273400-112281600	Weak transcription	Fetal Heart	heart
42	chr10:112273400-112281800	Weak transcription	Primary T helper cells fromperipheralblood	blood
43	chr10:112273400-112285200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr10:112273600-112282200	Weak transcription	Primary T helper cells PMA-I stimulated	--
45	chr10:112274000-112281600	Weak transcription	Lung	lung
46	chr10:112274000-112283200	Weak transcription	HUES6 Cell Line	embryonic stem cell
47	chr10:112274000-112284800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
48	chr10:112274000-112287400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr10:112274000-112290000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr10:112274200-112277600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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