Variant report

Variant	nsv430801
Chromosome Location	chr2:37917394-38003485
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:779)
CpG islands
(count:611)
Chromatin interactive
region (count:27)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:779 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr2:37940290-37940750	K562	blood:	n/a	n/a
2	ARID3A	chr2:37945884-37946232	K562	blood:	n/a	n/a
3	ARID3A	chr2:37991365-37991558	K562	blood:	n/a	n/a
4	ATF1	chr2:37938545-37938858	K562	blood:	n/a	n/a
5	ATF1	chr2:37940479-37940807	K562	blood:	n/a	n/a
6	ATF1	chr2:37945872-37946265	K562	blood:	n/a	n/a
7	ATF3	chr2:37995406-37996129	A549	lung:	n/a	n/a
8	ATF3	chr2:37995433-37996168	A549	lung:	n/a	n/a
9	BCL11A	chr2:37962705-37962895	GM12878	blood:	n/a	n/a
10	BCL11A	chr2:37940546-37940813	GM12878	blood:	n/a	n/a
11	BCL3	chr2:37993027-37993826	A549	lung:	n/a	chr2:37993597-37993606
12	BCL3	chr2:37995167-37996320	A549	lung:	n/a	n/a
13	BCL3	chr2:37984248-37984605	GM12878	blood:	n/a	n/a
14	BCL3	chr2:37995243-37996336	A549	lung:	n/a	n/a
15	BCL3	chr2:37995811-37996081	GM12878	blood:	n/a	n/a
16	BHLHE40	chr2:37938610-37938663	K562	blood:	n/a	n/a
17	BHLHE40	chr2:37945886-37946387	K562	blood:	n/a	n/a
18	BHLHE40	chr2:37991364-37991559	K562	blood:	n/a	n/a
19	CBX3	chr2:37945729-37946316	K562	blood:	n/a	n/a
20	CCNT2	chr2:37940581-37940741	K562	blood:	n/a	n/a
21	CCNT2	chr2:37945975-37946199	K562	blood:	n/a	n/a
22	CEBPB	chr2:37980380-37980532	K562	blood:	n/a	n/a
23	CEBPB	chr2:37958768-37959040	IMR90	lung:	n/a	chr2:37958919-37958930
24	CEBPB	chr2:37928474-37928610	HepG2	liver:	n/a	chr2:37928542-37928553
25	CEBPB	chr2:37948155-37948260	HepG2	liver:	n/a	n/a
26	CEBPB	chr2:37928394-37928689	IMR90	lung:	n/a	chr2:37928542-37928553
27	CEBPB	chr2:37995121-37995973	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr2:37928450-37928683	A549	lung:	n/a	chr2:37928542-37928553
29	CEBPB	chr2:37977395-37977710	MCF-7	breast:	n/a	n/a
30	CEBPB	chr2:37979966-37980544	IMR90	lung:	n/a	n/a
31	CEBPB	chr2:37919916-37920190	IMR90	lung:	n/a	n/a
32	CEBPB	chr2:37958770-37959005	Hela-S3	cervix:	n/a	chr2:37958919-37958930
33	CEBPB	chr2:37995107-37996126	IMR90	lung:	n/a	n/a
34	CEBPB	chr2:37962124-37962469	IMR90	lung:	n/a	n/a
35	CEBPB	chr2:37995096-37996236	A549	lung:	n/a	n/a
36	CEBPB	chr2:37993064-37993861	A549	lung:	n/a	n/a
37	CEBPB	chr2:37977492-37977692	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr2:37995384-37995863	MCF-7	breast:	n/a	n/a
39	CEBPB	chr2:37938535-37938821	Hela-S3	cervix:	n/a	n/a
40	CEBPB	chr2:37940527-37940702	K562	blood:	n/a	n/a
41	CEBPB	chr2:37980414-37980446	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr2:37958765-37959048	A549	lung:	n/a	chr2:37958919-37958930
43	CEBPB	chr2:37979935-37980527	HepG2	liver:	n/a	n/a
44	CEBPB	chr2:37940502-37940827	K562	blood:	n/a	n/a
45	CEBPB	chr2:37958826-37959080	K562	blood:	n/a	chr2:37958919-37958930
46	CEBPB	chr2:37938554-37939655	IMR90	lung:	n/a	chr2:37939317-37939329
47	CEBPB	chr2:37995436-37996046	A549	lung:	n/a	n/a
48	CEBPB	chr2:37977457-37977649	K562	blood:	n/a	n/a
49	CEBPB	chr2:37925954-37926349	Hela-S3	cervix:	n/a	chr2:37926004-37926021 chr2:37926009-37926020
50	CEBPB	chr2:37925899-37926278	IMR90	lung:	n/a	chr2:37926004-37926021 chr2:37926009-37926020

(count:611 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr2:37962248-37962298	H1-hESC	embryonic stem cell:	embryo
2	chr2:37962248-37962298	H1-hESC	embryonic stem cell:	embryo
3	chr2:37962248-37962298	ovcar-3	ovarian:	n/a
4	chr2:37993353-37993403	HRE	kidney:	n/a
5	chr2:37997383-37997433	HCPEpiC	choroid plexus:	n/a
6	chr2:37927157-37927207	HL-60	blood:	n/a
7	chr2:37948491-37948541	K562	blood:	n/a
8	chr2:37948491-37948541	HUVEC	blood vessel:	n/a
9	chr2:38001560-38001610	Hela-S3	cervix:	n/a
10	chr2:38001560-38001610	HCT-116	colon:	n/a
11	chr2:37996000-37996050	GM19239	blood:	n/a
12	chr2:37997383-37997433	AG04449	skin:	fetal
13	chr2:37962248-37962298	HepG2	liver:	n/a
14	chr2:37996000-37996050	ovcar-3	ovarian:	n/a
15	chr2:37927157-37927207	AG09319	gingival:	n/a
16	chr2:37962248-37962298	HEEpiC	esophagus:	n/a
17	chr2:37962248-37962298	HAEpiC	amniotic membrane:	n/a
18	chr2:37996000-37996050	GM12878	blood:	n/a
19	chr2:37938640-37938690	AG04449	skin:	fetal
20	chr2:37996000-37996050	HCF	heart:	n/a
21	chr2:37948491-37948541	HCM	heart:	n/a
22	chr2:37996000-37996050	K562	blood:	n/a
23	chr2:37985316-37985366	HAEpiC	amniotic membrane:	n/a
24	chr2:38001560-38001610	Hepatocyte	liver:	n/a
25	chr2:37938640-37938690	H1-hESC	embryonic stem cell:	embryo
26	chr2:37969786-37969836	HCPEpiC	choroid plexus:	n/a
27	chr2:37996000-37996050	Hela-S3	cervix:	n/a
28	chr2:37996000-37996050	SAEC	small airway:	n/a
29	chr2:37985316-37985366	HUVEC	blood vessel:	n/a
30	chr2:37948491-37948541	A549	lung:	n/a
31	chr2:37962248-37962298	HPAEpiC	pulmonary alveolar:	n/a
32	chr2:37948491-37948541	GM19239	blood:	n/a
33	chr2:37969786-37969836	MCF-7	breast:	n/a
34	chr2:37993353-37993403	HRPEpiC	eye:	n/a
35	chr2:37993353-37993403	GM12891	blood:	n/a
36	chr2:37938640-37938690	LNCaP	prostate:	n/a
37	chr2:37996000-37996050	BJ	skin:	n/a
38	chr2:37996000-37996050	HepG2	liver:	n/a
39	chr2:37948491-37948541	BJ	skin:	n/a
40	chr2:37962248-37962298	PFSK-1	brain:	n/a
41	chr2:38001560-38001610	SAEC	small airway:	n/a
42	chr2:38001560-38001610	HRE	kidney:	n/a
43	chr2:37938640-37938690	SK-N-MC	brain:	n/a
44	chr2:37938640-37938690	ECC-1	luminal epithelium:	n/a
45	chr2:37996000-37996050	Caco-2	colon:	n/a
46	chr2:38001560-38001610	MCF10A-Er-Src	breast:	n/a
47	chr2:38001560-38001610	NH-A	brain:	n/a
48	chr2:37997383-37997433	LNCaP	prostate:	n/a
49	chr2:37969786-37969836	AoSMC	blood vessel:	n/a
50	chr2:37948491-37948541	T-47D	breast:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr2:37903809..37907927-chr2:37994371..37997035,4	MCF-7	breast:
2	chr2:37993752..37996799-chr2:38014077..38017922,3	MCF-7	breast:
3	chr2:37919594..37922588-chr2:37925498..37927589,2	K562	blood:
4	chr2:37965210..37967124-chr2:37973295..37975217,2	MCF-7	breast:
5	chr2:37992694..37995245-chr2:38016725..38019213,2	MCF-7	breast:
6	chr2:37993452..37995079-chr2:37996632..37998258,2	K562	blood:
7	chr2:37992911..37994888-chr2:37999261..38002227,2	MCF-7	breast:
8	chr2:37944151..37947328-chr2:37948654..37951437,3	K562	blood:
9	chr2:37987301..37989251-chr2:37993852..37996621,2	K562	blood:
10	chr2:37984227..37987177-chr2:37987780..37989668,2	MCF-7	breast:
11	chr2:38000546..38002739-chr2:38022244..38024636,2	MCF-7	breast:
12	chr2:37901542..37903159-chr2:37919185..37920897,2	K562	blood:
13	chr2:37987301..37989251-chr2:37993852..37996621,2	K562	blood:
14	chr2:37958368..37961673-chr2:37962589..37965814,3	K562	blood:
15	chr2:37984227..37987177-chr2:37987780..37989668,2	MCF-7	breast:
16	chr2:37961835..37963512-chr2:37971098..37973001,2	MCF-7	breast:
17	chr2:37992911..37994888-chr2:37999261..38002227,2	MCF-7	breast:
18	chr2:37958368..37961444-chr2:37963169..37965814,4	K562	blood:
19	chr2:37995679..37997775-chr2:38028677..38031407,2	MCF-7	breast:
20	chr2:37993452..37995079-chr2:37996632..37998258,2	K562	blood:
21	chr2:37896203..37899196-chr2:37994735..37996425,2	MCF-7	breast:
22	chr2:37931880..37933672-chr2:37934871..37936423,2	MCF-7	breast:
23	chr2:37931880..37933672-chr2:37934871..37936423,2	MCF-7	breast:
24	chr2:37887391..37889613-chr2:38000617..38003018,2	K562	blood:
25	chr2:37897696..37900309-chr2:37936640..37940177,3	MCF-7	breast:
26	chr2:37919594..37922588-chr2:37925498..37927589,2	K562	blood:
27	chr2:37944151..37947328-chr2:37948654..37951437,3	K562	blood:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM82A1-3	chr2:37974117-37974189	XLOC_001431
2	lnc-PRKD3-1	chr2:37945761-37945925	NONHSAT070140
3	lnc-PRKD3-1	chr2:37956758-37956921	NONHSAT070140
4	lnc-PRKD3-1	chr2:37920685-37920906	NONHSAT070140
5	lnc-PRKD3-1	chr2:37945761-37945925	NONHSAT070138
6	lnc-PRKD3-1	chr2:37956390-37956510	NONHSAT070138
7	lnc-FAM82A1-3	chr2:37971476-37971786	XLOC_001431

No data

Variant related genes	Relation type
ENSG00000236572	TF binding region
CDC42EP3	TF binding region
ENSG00000236572	CpG island
CDC42EP3	CpG island
ENSG00000236572	chromatin interactions
ENSG00000163171	chromatin interactions
ACVR2B	miRNA target sites

Extended variants
information (count: 5421 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:5421 , 50 per page) page: 1 2 3 4 5 6 7 ... 109

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12470220	chr2:37917394-37917395	Weak transcription Enhancers Flanking Active TSS	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs78273178	chr2:37917467-37917468	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs12466001	chr2:37917470-37917471	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs575078714	chr2:37917479-37917480	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs544316964	chr2:37917481-37917482	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs139691930	chr2:37917486-37917487	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs533939402	chr2:37917512-37917513	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs189915010	chr2:37917542-37917543	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs567118995	chr2:37917544-37917545	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs527962660	chr2:37917564-37917565	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs570893069	chr2:37917613-37917614	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs180997429	chr2:37917636-37917637	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs570707081	chr2:37917696-37917697	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs10172526	chr2:37917773-37917774	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs556578444	chr2:37917785-37917786	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs372720949	chr2:37917787-37917788	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs568463228	chr2:37917822-37917823	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs185230386	chr2:37917857-37917858	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs370376621	chr2:37917862-37917863	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs201467798	chr2:37917872-37917873	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs35979965	chr2:37917873-37917874	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs10196147	chr2:37917874-37917875	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs10172625	chr2:37917888-37917889	Weak transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs191217700	chr2:37917897-37917898	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs183672594	chr2:37917902-37917903	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs544423805	chr2:37917935-37917936	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs562576272	chr2:37917991-37917992	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs188670439	chr2:37918003-37918004	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs375290400	chr2:37918047-37918048	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs541943345	chr2:37918054-37918055	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs532437754	chr2:37918111-37918112	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs145218997	chr2:37918137-37918138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs547369686	chr2:37918138-37918139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs527331752	chr2:37918177-37918178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs369315593	chr2:37918195-37918196	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs552442871	chr2:37918230-37918231	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs565578080	chr2:37918231-37918232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs372659812	chr2:37918244-37918245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs375665872	chr2:37918267-37918268	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs10198874	chr2:37918277-37918278	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs550126575	chr2:37918334-37918335	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs373357641	chr2:37918336-37918337	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs568675789	chr2:37918386-37918387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs535558746	chr2:37918389-37918390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs13419325	chr2:37918390-37918391	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs377448119	chr2:37918415-37918416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs56395038	chr2:37918448-37918449	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs56071518	chr2:37918450-37918451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs375039860	chr2:37918453-37918454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs539852486	chr2:37918461-37918462	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Breast cancer	17393978	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Ovarian neoplasms	16753589	CNVD
Glioblastoma multiforme	17387387	CNVD
Neuroblastoma	17533364	CNVD
Neuroblastoma	18923191	CNVD
Endometrial cancer	22040021	CNVD
Adrenal tumor	17535989	CNVD
Breast cancer	21264507	CNVD
Basal cell lymphoma	17053054	CNVD
Medulloblastoma	17522785	CNVD
Cancer	23418310	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Ependymoma	16718352	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Prostate cancer	18632612	CNVD
Bladder cancer	21909424	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	20505157	CNVD
Autism	17483303	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Medulloblastoma	20607354	CNVD
Leukemia	18628472	CNVD
Autism	19521722	CNVD
Autism	18522746	CNVD
Non-small cell lung cancer	18927303	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	21965145	CNVD
Breast cancer	16397240	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21508638	CNVD
Neurodevelopmental disorder	22521361	CNVD
Neurocytoma	17123091	CNVD
small cell lung cancer	20016488	CNVD
Melanoma	18172304	CNVD
Cancer	16751803	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1147 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37907000-37921000	Weak transcription	Stomach Mucosa	stomach
2	chr2:37914200-37917800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr2:37915200-37917800	Enhancers	HSMM	muscle
4	chr2:37915200-37918000	Enhancers	Fetal Heart	heart
5	chr2:37915200-37918000	Enhancers	HSMMtube	muscle
6	chr2:37915400-37917400	Enhancers	Placenta	Placenta
7	chr2:37915400-37917400	Enhancers	Fetal Stomach	stomach
8	chr2:37915400-37917800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr2:37915400-37917800	Enhancers	NHLF	lung
10	chr2:37915600-37917400	Enhancers	Placenta Amnion	Placenta Amnion
11	chr2:37915600-37917600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr2:37915600-37917600	Enhancers	HMEC	breast
13	chr2:37915600-37917800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr2:37915600-37917800	Enhancers	Rectal Smooth Muscle	rectum
15	chr2:37915800-37917400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr2:37915800-37917600	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr2:37916000-37917600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr2:37916000-37917800	Enhancers	Fetal Muscle Leg	muscle
19	chr2:37916000-37917800	Enhancers	Ovary	ovary
20	chr2:37916200-37917400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
21	chr2:37916200-37917600	Enhancers	Brain Germinal Matrix	brain
22	chr2:37916200-37917800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr2:37916400-37917400	Enhancers	NH-A	brain
24	chr2:37916600-37917400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr2:37916600-37917400	Enhancers	Muscle Satellite Cultured Cells	--
26	chr2:37916600-37917400	Enhancers	NHEK	skin
27	chr2:37916600-37917600	Enhancers	A549	lung
28	chr2:37916600-37922200	Weak transcription	Fetal Lung	lung
29	chr2:37916600-37926000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr2:37916800-37917800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr2:37916800-37920000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
32	chr2:37917000-37917400	Flanking Active TSS	Colon Smooth Muscle	Colon
33	chr2:37917000-37919200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr2:37917200-37917600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr2:37917200-37925600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr2:37917200-37938000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr2:37917200-37938800	Weak transcription	Aorta	Aorta
38	chr2:37917400-37917600	Enhancers	Colon Smooth Muscle	Colon
39	chr2:37917600-37917800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr2:37917600-37919600	Weak transcription	HMEC	breast
41	chr2:37917600-37920400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
42	chr2:37917800-37919800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr2:37917800-37919800	Weak transcription	NHLF	lung
44	chr2:37918000-37922800	Weak transcription	Fetal Heart	heart
45	chr2:37919600-37920200	Enhancers	HMEC	breast
46	chr2:37919800-37920400	Enhancers	NHLF	lung
47	chr2:37919800-37920800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr2:37920000-37920800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr2:37920200-37921200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr2:37920400-37921000	Enhancers	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links