Variant report

Variant	nsv432434
Chromosome Location	chr3:75387457-75639894
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2768)
CpG islands
(count:2628)
Chromatin interactive
region (count:10)
LncRNA
region (count:23)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2768 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:75601426-75601483	K562	blood:	n/a	n/a
2	ARID3A	chr3:75482025-75482381	HepG2	liver:	n/a	n/a
3	ATF1	chr3:75484451-75484710	K562	blood:	n/a	n/a
4	ATF1	chr3:75442553-75442767	K562	blood:	n/a	n/a
5	ATF1	chr3:75482136-75482245	K562	blood:	n/a	n/a
6	ATF3	chr3:75482021-75482341	K562	blood:	n/a	n/a
7	ATF3	chr3:75482035-75482349	A549	lung:	n/a	n/a
8	BACH1	chr3:75390901-75391145	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr3:75484448-75484647	GM12878	blood:	n/a	n/a
10	BATF	chr3:75596078-75596520	GM12878	blood:	n/a	n/a
11	BATF	chr3:75468128-75468306	GM12878	blood:	n/a	n/a
12	BATF	chr3:75471237-75471503	GM12878	blood:	n/a	n/a
13	BATF	chr3:75467667-75467909	GM12878	blood:	n/a	n/a
14	BATF	chr3:75483970-75484356	GM12878	blood:	n/a	n/a
15	BATF	chr3:75466554-75466845	GM12878	blood:	n/a	chr3:75466774-75466785
16	BATF	chr3:75471192-75471564	GM12878	blood:	n/a	n/a
17	BATF	chr3:75466555-75466915	GM12878	blood:	n/a	chr3:75466774-75466785
18	BATF	chr3:75551282-75551694	GM12878	blood:	n/a	n/a
19	BATF	chr3:75548046-75548331	GM12878	blood:	n/a	n/a
20	BATF	chr3:75527612-75527941	GM12878	blood:	n/a	n/a
21	BATF	chr3:75483026-75483267	GM12878	blood:	n/a	n/a
22	BATF	chr3:75547955-75548333	GM12878	blood:	n/a	n/a
23	BATF	chr3:75551976-75552365	GM12878	blood:	n/a	n/a
24	BATF	chr3:75478786-75479063	GM12878	blood:	n/a	n/a
25	BATF	chr3:75483065-75483278	GM12878	blood:	n/a	n/a
26	BATF	chr3:75566162-75566431	GM12878	blood:	n/a	n/a
27	BATF	chr3:75573564-75573871	GM12878	blood:	n/a	n/a
28	BATF	chr3:75483500-75483898	GM12878	blood:	n/a	chr3:75483518-75483528 chr3:75483514-75483524
29	BATF	chr3:75544610-75544819	GM12878	blood:	n/a	chr3:75544723-75544731
30	BATF	chr3:75411604-75411874	GM12878	blood:	n/a	n/a
31	BATF	chr3:75551286-75551692	GM12878	blood:	n/a	n/a
32	BATF	chr3:75573541-75573863	GM12878	blood:	n/a	n/a
33	BATF	chr3:75411520-75411813	GM12878	blood:	n/a	n/a
34	BCL11A	chr3:75466632-75466905	GM12878	blood:	n/a	chr3:75466778-75466787
35	BCL11A	chr3:75466653-75466911	GM12878	blood:	n/a	chr3:75466778-75466787
36	BCL11A	chr3:75547956-75548367	GM12878	blood:	n/a	chr3:75548358-75548367
37	BCL11A	chr3:75483008-75483267	GM12878	blood:	n/a	n/a
38	BCL11A	chr3:75573652-75573882	GM12878	blood:	n/a	chr3:75573771-75573780
39	BCL11A	chr3:75483449-75483810	GM12878	blood:	n/a	chr3:75483516-75483525
40	BCL11A	chr3:75609659-75609871	GM12878	blood:	n/a	n/a
41	BCL11A	chr3:75566204-75566463	GM12878	blood:	n/a	n/a
42	BCL11A	chr3:75471268-75471550	GM12878	blood:	n/a	n/a
43	BCL11A	chr3:75551326-75551720	GM12878	blood:	n/a	n/a
44	BCL11A	chr3:75544573-75544904	GM12878	blood:	n/a	chr3:75544808-75544817
45	BCL11A	chr3:75482472-75482657	GM12878	blood:	n/a	n/a
46	BCL11A	chr3:75484021-75484296	GM12878	blood:	n/a	n/a
47	BCL11A	chr3:75551437-75551623	GM12878	blood:	n/a	n/a
48	BCL11A	chr3:75547962-75548278	GM12878	blood:	n/a	n/a
49	BCL11A	chr3:75467554-75467709	GM12878	blood:	n/a	n/a
50	BCL11A	chr3:75483447-75484322	GM12878	blood:	n/a	chr3:75483516-75483525

(count:2628 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:75629039-75629089	HMEC	breast:	n/a
2	chr3:75443047-75443097	AG10803	skin:	n/a
3	chr3:75629039-75629089	ovcar-3	ovarian:	n/a
4	chr3:75553762-75553812	SAEC	small airway:	n/a
5	chr3:75410789-75410839	SK-N-MC	brain:	n/a
6	chr3:75629039-75629089	HMEC	breast:	n/a
7	chr3:75443047-75443097	AG10803	skin:	n/a
8	chr3:75629039-75629089	ovcar-3	ovarian:	n/a
9	chr3:75553762-75553812	SAEC	small airway:	n/a
10	chr3:75410789-75410839	SK-N-MC	brain:	n/a
11	chr3:75485110-75485160	CMK	blood:	n/a
12	chr3:75628819-75628869	HUVEC	blood vessel:	n/a
13	chr3:75445610-75445660	AG09309	skin:	n/a
14	chr3:75484213-75484263	NHBE	bronchial:	n/a
15	chr3:75484209-75484259	GM12891	blood:	n/a
16	chr3:75485110-75485160	HRE	kidney:	n/a
17	chr3:75410789-75410839	U87	brain:	n/a
18	chr3:75445502-75445552	HAEpiC	amniotic membrane:	n/a
19	chr3:75631426-75631476	GM19239	blood:	n/a
20	chr3:75481281-75481331	MCF-7	breast:	n/a
21	chr3:75412866-75412916	SAEC	small airway:	n/a
22	chr3:75444752-75444802	ProgFib	skin:	n/a
23	chr3:75416171-75416221	AG09309	skin:	n/a
24	chr3:75482182-75482232	HEK293	kidney:	embryo
25	chr3:75485448-75485498	LNCaP	prostate:	n/a
26	chr3:75415561-75415611	H1-hESC	embryonic stem cell:	embryo
27	chr3:75556027-75556077	NHBE	bronchial:	n/a
28	chr3:75412866-75412916	U87	brain:	n/a
29	chr3:75416171-75416221	HepG2	liver:	n/a
30	chr3:75411038-75411088	HepG2	liver:	n/a
31	chr3:75485110-75485160	PrEC	prostate:	n/a
32	chr3:75555994-75556044	Hela-S3	cervix:	n/a
33	chr3:75411038-75411088	A549	lung:	n/a
34	chr3:75445502-75445552	SK-N-SH_RA	brain:	n/a
35	chr3:75628819-75628869	HMEC	breast:	n/a
36	chr3:75484516-75484566	HIPEpiC	eye:	n/a
37	chr3:75414693-75414743	ProgFib	skin:	n/a
38	chr3:75414486-75414536	CMK	blood:	n/a
39	chr3:75411038-75411088	ECC-1	luminal epithelium:	n/a
40	chr3:75485110-75485160	NH-A	brain:	n/a
41	chr3:75487529-75487579	AG09319	gingival:	n/a
42	chr3:75445502-75445552	IMR90	lung:	fetal
43	chr3:75415561-75415611	AG04449	skin:	fetal
44	chr3:75485110-75485160	Hela-S3	cervix:	n/a
45	chr3:75414693-75414743	T-47D	breast:	n/a
46	chr3:75444752-75444802	HRPEpiC	eye:	n/a
47	chr3:75441804-75441854	PrEC	prostate:	n/a
48	chr3:75484516-75484566	SAEC	small airway:	n/a
49	chr3:75415591-75415641	Hepatocyte	liver:	n/a
50	chr3:75555994-75556044	HPAEpiC	pulmonary alveolar:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr3:75343035..75343810-chr3:75470999..75471871,7	MCF-7	breast:
2	chr3:75343397..75343923-chr3:75600934..75601577,2	MCF-7	breast:
3	chr3:75484863..75485638-chr6:26156199..26156944,2	HCT-116	colon:
4	chr3:75390707..75391392-chr3:75471007..75471537,3	MCF-7	breast:
5	chr3:75390707..75391392-chr3:75471007..75471537,3	MCF-7	breast:
6	chr3:75466672..75467412-chr3:129812592..129813394,2	NB4	blood:
7	chr3:75343455..75344253-chr3:75389889..75390567,2	MCF-7	breast:
8	chr11:71498107..71498639-chr3:75483883..75484386,2	Hela-S3	cervix:
9	chr3:75343052..75344300-chr3:75470848..75471840,6	MCF-7	breast:
10	chr3:75343239..75343917-chr3:75478470..75479360,2	MCF-7	breast:

(count:23 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FRG2C-3	chr3:75501683-75501794	NONHSAT090533
2	lnc-FRG2C-3	chr3:75484499-75484564	ENSG00000272690.1
3	lnc-FRG2C-3	chr3:75501683-75501802	ENSG00000272690.1
4	lnc-FRG2C-3	chr3:75500361-75500553	ENSG00000272690.1
5	lnc-FRG2C-3	chr3:75488905-75488997	XLOC_002710
6	lnc-FRG2C-3	chr3:75486207-75486426	XLOC_002710
7	lnc-FRG2C-2	chr3:75608026-75608398	XLOC_002712
8	lnc-FRG2C-3	chr3:75500361-75500553	ENSG00000272690.1
9	lnc-FRG2C-3	chr3:75488905-75488988	XLOC_002710
10	lnc-FRG2C-2	chr3:75606223-75606260	XLOC_002712
11	lnc-ZNF717-3	chr3:75629129-75629150	ENSG00000272710.1
12	lnc-FRG2C-3	chr3:75501348-75501809	ENSG00000272690.1
13	lnc-ZNF717-3	chr3:75589200-75589378	ENSG00000272710.1
14	lnc-FRG2C-3	chr3:75497520-75500553	NONHSAT090533
15	lnc-FRG2C-3	chr3:75485928-75486426	XLOC_002710
16	lnc-FRG2C-3	chr3:75496316-75496447	ENSG00000272690.1
17	lnc-FRG2C-3	chr3:75492659-75492797	ENSG00000272690.1
18	lnc-FRG2C-3	chr3:75485367-75485503	XLOC_002710
19	lnc-FRG2C-3	chr3:75505768-75506637	ENSG00000272690.1
20	lnc-FRG2C-2	chr3:75608026-75608433	XLOC_002712
21	lnc-FRG2C-11	chr3:75570954-75571163	NONHSAT090534
22	lnc-FRG2C-3	chr3:75492659-75492775	XLOC_002710
23	lnc-FRG2C-2	chr3:75606117-75606146	XLOC_002712

No data

Variant related genes	Relation type
ENSG00000239383	TF binding region
OR7E66P	TF binding region
MYLKP1	TF binding region
RPS3AP15	TF binding region
ENSG00000243794	TF binding region
ENSG00000272690	TF binding region
FAM86DP	TF binding region
ENSG00000266685	TF binding region
ENSG00000242953	TF binding region
OR7E55P	TF binding region
ENSG00000221602	TF binding region
OR7E22P	TF binding region
LSP1P2	TF binding region
ENSG00000263782	TF binding region
ENPP7P2	TF binding region
ALG1L6P	TF binding region
ENSG00000244699	TF binding region
ENSG00000272710	TF binding region
ENSG00000239383	CpG island
OR7E66P	CpG island
MYLKP1	CpG island
RPS3AP15	CpG island
ENSG00000243794	CpG island
ENSG00000272690	CpG island
FAM86DP	CpG island
ENSG00000266685	CpG island
ENSG00000242953	CpG island
OR7E55P	CpG island
ENSG00000221602	CpG island
OR7E22P	CpG island
LSP1P2	CpG island
ENSG00000263782	CpG island
ENPP7P2	CpG island
ALG1L6P	CpG island
ENSG00000244699	CpG island
ENSG00000272710	CpG island
ENSG00000158483	chromatin interactions
ENSG00000248243	chromatin interactions
ENSG00000168298	chromatin interactions
ENSG00000251287	chromatin interactions
ITGB1	miRNA target sites
SFRS5	miRNA target sites

Extended variants
information (count: 10299 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:10299 , 50 per page) page: 1 2 3 4 5 6 7 ... 206

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4677503	chr3:75387457-75387458	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs556277114	chr3:75387466-75387467	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs182655692	chr3:75387480-75387481	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs186978041	chr3:75387489-75387490	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs149812133	chr3:75387530-75387531	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs190684613	chr3:75387542-75387543	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs574042455	chr3:75387561-75387562	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs182724345	chr3:75387580-75387581	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs563192058	chr3:75387592-75387593	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs533388241	chr3:75387609-75387610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs189089984	chr3:75387616-75387617	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs193032661	chr3:75387677-75387678	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs184562480	chr3:75387679-75387680	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs77775238	chr3:75387701-75387702	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs566935537	chr3:75387715-75387716	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs537440355	chr3:75387716-75387717	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs146861037	chr3:75387719-75387720	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs571498701	chr3:75387728-75387729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs538492711	chr3:75387773-75387774	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs36096282	chr3:75387805-75387806	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs187686707	chr3:75387840-75387841	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs572223108	chr3:75387849-75387850	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs534297780	chr3:75387851-75387852	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs555887599	chr3:75387893-75387894	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs574128102	chr3:75387910-75387911	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs544570659	chr3:75387939-75387940	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs537627414	chr3:75388006-75388007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs111531008	chr3:75388007-75388008	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs113209721	chr3:75388015-75388016	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs567829862	chr3:75388033-75388034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs115059862	chr3:75388040-75388041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs560320032	chr3:75388070-75388071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs6765044	chr3:75388161-75388162	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs542356840	chr3:75388176-75388177	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs560648784	chr3:75388199-75388200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs531236736	chr3:75388208-75388209	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs6798065	chr3:75388243-75388244	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs571122156	chr3:75388244-75388245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs532458621	chr3:75388254-75388255	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs547673501	chr3:75388287-75388288	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs565922738	chr3:75388294-75388295	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs576729839	chr3:75388382-75388383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs191355846	chr3:75388397-75388398	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs111569911	chr3:75388399-75388400	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs556811549	chr3:75388419-75388420	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs567744581	chr3:75388462-75388463	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs6783159	chr3:75388514-75388515	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs542460508	chr3:75388547-75388548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs117348634	chr3:75388580-75388581	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs201414806	chr3:75388606-75388607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Acute myeloid leukemia	20729466	CNVD
Glioblastoma multiforme	21080181	CNVD
Melanoma	18172304	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Insulin resistance	16721378	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Oral cancer	19627613	CNVD
Renal cell carcinoma	19461508	CNVD
Epithelial cancer	22065749	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Acute myeloid leukemia	16864856	CNVD
Liposarcoma	21253554	CNVD
Basal cell lymphoma	21115979	CNVD
Endometrial cancer	22040021	CNVD
Pancreatic endocrine tumor	20981439	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Oral cancer	21386901	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Esophageal cancer	20955586	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	21251322	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Autism	22102821	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Prostate cancer	18632612	CNVD
Metanephric adenoma	20802469	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21509527	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	21399695	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Colorectal cancer	16272173	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Soft tissue tumor	16732325	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	20967226	CNVD
early-passage human iPS cells	21368824	CNVD
Williams Syndrome	20824207	CNVD
Melanoma	20877625	CNVD
Ollier disease	21235737	CNVD
Non-syndromic sensorineural hearing loss	22297974	CNVD

Chromatin state (count:1678 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:75381800-75389800	Weak transcription	Right Atrium	heart
2	chr3:75382600-75389800	Weak transcription	Spleen	Spleen
3	chr3:75386800-75388000	Enhancers	GM12878-XiMat	blood
4	chr3:75387200-75389800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr3:75387400-75389800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr3:75389600-75391200	Enhancers	Fetal Muscle Trunk	muscle
7	chr3:75389800-75390400	Enhancers	Pancreas	Pancrea
8	chr3:75389800-75390600	Enhancers	Esophagus	oesophagus
9	chr3:75389800-75390600	Enhancers	Ovary	ovary
10	chr3:75389800-75390800	Enhancers	Spleen	Spleen
11	chr3:75389800-75391000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr3:75389800-75391000	Enhancers	Left Ventricle	heart
13	chr3:75389800-75391000	Enhancers	Right Atrium	heart
14	chr3:75389800-75391200	Enhancers	Fetal Muscle Leg	muscle
15	chr3:75389800-75392800	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr3:75390000-75390600	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr3:75390000-75391000	Enhancers	Adipose Nuclei	Adipose
18	chr3:75390000-75391000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr3:75390200-75390600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr3:75390200-75390800	Bivalent Enhancer	Osteobl	bone
21	chr3:75390200-75391000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
22	chr3:75390400-75390600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr3:75390400-75390600	Enhancers	HUES6 Cell Line	embryonic stem cell
24	chr3:75390400-75390600	Enhancers	Liver	Liver
25	chr3:75390400-75390800	Enhancers	HUES48 Cell Line	embryonic stem cell
26	chr3:75390400-75391000	Enhancers	H1 Cell Line	embryonic stem cell
27	chr3:75390400-75391000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr3:75390400-75391000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr3:75390400-75391000	Enhancers	Duodenum Smooth Muscle	Duodenum
30	chr3:75390400-75391000	Enhancers	Lung	lung
31	chr3:75390400-75391000	Enhancers	Right Ventricle	heart
32	chr3:75390400-75391800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr3:75390400-75391800	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr3:75390600-75391000	Active TSS	ES-I3 Cell Line	embryonic stem cell
35	chr3:75390600-75391000	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
36	chr3:75390600-75391000	Active TSS	iPS-18 Cell Line	embryonic stem cell
37	chr3:75390600-75391000	Active TSS	iPS-20b Cell Line	embryonic stem cell
38	chr3:75390600-75391000	Flanking Active TSS	Ovary	ovary
39	chr3:75390600-75391200	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
40	chr3:75390600-75391400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
41	chr3:75391000-75391200	Enhancers	Ovary	ovary
42	chr3:75391000-75393200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr3:75391000-75400600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr3:75391200-75391400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr3:75391200-75391600	Enhancers	ES-I3 Cell Line	embryonic stem cell
46	chr3:75391200-75392400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
47	chr3:75391200-75392600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr3:75391600-75392000	Enhancers	Primary hematopoietic stem cells short term culture	blood
49	chr3:75392600-75392800	Enhancers	Lung	lung
50	chr3:75393200-75395000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links