Variant report

Variant	nsv432464
Chromosome Location	chr3:100299329-100442478
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2507)
CpG islands
(count:1648)
Chromatin interactive
region (count:86)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2507 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:100353734-100354533	HepG2	liver:	n/a	n/a
2	ARID3A	chr3:100381238-100381404	K562	blood:	n/a	n/a
3	ARID3A	chr3:100359648-100359874	HepG2	liver:	n/a	n/a
4	ARID3A	chr3:100348388-100349223	K562	blood:	n/a	n/a
5	ARID3A	chr3:100353731-100353930	K562	blood:	n/a	n/a
6	ARID3A	chr3:100321800-100321832	K562	blood:	n/a	n/a
7	ARID3A	chr3:100369723-100370159	K562	blood:	n/a	n/a
8	ARID3A	chr3:100321365-100321737	HepG2	liver:	n/a	n/a
9	ARID3A	chr3:100400484-100400645	HepG2	liver:	n/a	n/a
10	ARID3A	chr3:100428405-100428550	K562	blood:	n/a	n/a
11	ARID3A	chr3:100332649-100333246	HepG2	liver:	n/a	n/a
12	ARID3A	chr3:100328325-100328363	K562	blood:	n/a	n/a
13	ARID3A	chr3:100427756-100428585	HepG2	liver:	n/a	n/a
14	ATF1	chr3:100328075-100328453	K562	blood:	n/a	n/a
15	ATF1	chr3:100427978-100428440	K562	blood:	n/a	n/a
16	ATF1	chr3:100353718-100353993	K562	blood:	n/a	n/a
17	ATF1	chr3:100309401-100309716	K562	blood:	n/a	n/a
18	ATF1	chr3:100348373-100348950	K562	blood:	n/a	n/a
19	ATF2	chr3:100360476-100360923	GM12878	blood:	n/a	n/a
20	ATF2	chr3:100369506-100370238	GM12878	blood:	n/a	n/a
21	ATF2	chr3:100429275-100429952	GM12878	blood:	n/a	n/a
22	ATF2	chr3:100427777-100428567	GM12878	blood:	n/a	n/a
23	ATF3	chr3:100370050-100370425	K562	blood:	n/a	n/a
24	ATF3	chr3:100348592-100348961	K562	blood:	n/a	n/a
25	BACH1	chr3:100321277-100321953	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr3:100428023-100428678	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr3:100321333-100321898	K562	blood:	n/a	n/a
28	BACH1	chr3:100381410-100381594	K562	blood:	n/a	n/a
29	BACH1	chr3:100349457-100349877	H1-hESC	embryonic stem cell:	n/a	chr3:100349697-100349711
30	BACH1	chr3:100324408-100324438	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr3:100421524-100421801	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr3:100421452-100421833	K562	blood:	n/a	n/a
33	BATF	chr3:100429333-100429812	GM12878	blood:	n/a	n/a
34	BATF	chr3:100429220-100429801	GM12878	blood:	n/a	n/a
35	BATF	chr3:100360218-100360885	GM12878	blood:	n/a	chr3:100360555-100360566
36	BATF	chr3:100369685-100370004	GM12878	blood:	n/a	n/a
37	BATF	chr3:100369687-100370030	GM12878	blood:	n/a	n/a
38	BATF	chr3:100360240-100360471	GM12878	blood:	n/a	n/a
39	BCL11A	chr3:100360195-100360894	GM12878	blood:	n/a	n/a
40	BCL11A	chr3:100360611-100360835	GM12878	blood:	n/a	n/a
41	BCL11A	chr3:100360235-100360494	GM12878	blood:	n/a	n/a
42	BCLAF1	chr3:100322205-100322553	GM12878	blood:	n/a	n/a
43	BCLAF1	chr3:100325837-100326298	GM12878	blood:	n/a	n/a
44	BCLAF1	chr3:100428169-100428667	GM12878	blood:	n/a	chr3:100428545-100428558 chr3:100428541-100428554 chr3:100428539-100428552
45	BCLAF1	chr3:100429350-100429879	GM12878	blood:	n/a	chr3:100429694-100429703 chr3:100429744-100429753 chr3:100429743-100429752
46	BHLHE40	chr3:100428885-100428960	K562	blood:	n/a	n/a
47	BHLHE40	chr3:100353702-100354034	K562	blood:	n/a	n/a
48	BHLHE40	chr3:100353728-100354019	HepG2	liver:	n/a	n/a
49	BHLHE40	chr3:100319239-100319439	GM12878	blood:	n/a	n/a
50	BHLHE40	chr3:100321896-100322085	GM12878	blood:	n/a	n/a

(count:1648 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:100428172-100428222	BE2_C	brain:	n/a
2	chr3:100428172-100428222	BE2_C	brain:	n/a
3	chr3:100428033-100428083	HCT-116	colon:	n/a
4	chr3:100428147-100428197	NT2-D1	testis:	n/a
5	chr3:100424830-100424880	LNCaP	prostate:	n/a
6	chr3:100428172-100428222	HRPEpiC	eye:	n/a
7	chr3:100430811-100430861	GM06990	blood:	n/a
8	chr3:100427096-100427146	HAEpiC	amniotic membrane:	n/a
9	chr3:100349374-100349424	MCF10A-Er-Src	breast:	n/a
10	chr3:100328713-100328763	NH-A	brain:	n/a
11	chr3:100328265-100328315	SAEC	small airway:	n/a
12	chr3:100401284-100401334	LNCaP	prostate:	n/a
13	chr3:100427239-100427289	HEEpiC	esophagus:	n/a
14	chr3:100328265-100328315	HRPEpiC	eye:	n/a
15	chr3:100328713-100328763	AG09319	gingival:	n/a
16	chr3:100428147-100428197	HRPEpiC	eye:	n/a
17	chr3:100428869-100428919	HAEpiC	amniotic membrane:	n/a
18	chr3:100328265-100328315	AG09309	skin:	n/a
19	chr3:100328745-100328795	BE2_C	brain:	n/a
20	chr3:100428398-100428448	LNCaP	prostate:	n/a
21	chr3:100428145-100428195	Jurkat	blood:	n/a
22	chr3:100428869-100428919	HIPEpiC	eye:	n/a
23	chr3:100437347-100437397	NHBE	bronchial:	n/a
24	chr3:100428033-100428083	Hepatocyte	liver:	n/a
25	chr3:100428147-100428197	CMK	blood:	n/a
26	chr3:100428398-100428448	GM19239	blood:	n/a
27	chr3:100424830-100424880	BJ	skin:	n/a
28	chr3:100429064-100429114	K562	blood:	n/a
29	chr3:100430811-100430861	MCF-7	breast:	n/a
30	chr3:100427239-100427289	GM06990	blood:	n/a
31	chr3:100424830-100424880	H1-hESC	embryonic stem cell:	embryo
32	chr3:100328745-100328795	HepG2	liver:	n/a
33	chr3:100428147-100428197	AG09319	gingival:	n/a
34	chr3:100328745-100328795	SK-N-SH_RA	brain:	n/a
35	chr3:100424830-100424880	Caco-2	colon:	n/a
36	chr3:100328713-100328763	A549	lung:	n/a
37	chr3:100401270-100401320	HPAEpiC	pulmonary alveolar:	n/a
38	chr3:100428172-100428222	Hepatocyte	liver:	n/a
39	chr3:100328713-100328763	SKMC	muscle:	n/a
40	chr3:100401270-100401320	HCF	heart:	n/a
41	chr3:100401200-100401250	RPTEC	kidney:	n/a
42	chr3:100428869-100428919	CMK	blood:	n/a
43	chr3:100349374-100349424	Caco-2	colon:	n/a
44	chr3:100437347-100437397	HRE	kidney:	n/a
45	chr3:100428145-100428195	SK-N-MC	brain:	n/a
46	chr3:100428398-100428448	HIPEpiC	eye:	n/a
47	chr3:100322493-100322543	Hepatocyte	liver:	n/a
48	chr3:100427096-100427146	GM19239	blood:	n/a
49	chr3:100428070-100428120	ProgFib	skin:	n/a
50	chr3:100428070-100428120	HCF	heart:	n/a

(count:86 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr3:100340717..100343040-chr3:100348395..100351881,3	K562	blood:
2	chr3:100432846..100436544-chr3:100436912..100439975,5	K562	blood:
3	chr3:100348848..100350394-chr3:100351417..100354134,2	K562	blood:
4	chr3:100369607..100371401-chr3:100374454..100376110,2	K562	blood:
5	chr3:100421148..100423017-chr3:100443429..100446212,2	K562	blood:
6	chr3:100412000..100414603-chr3:100428096..100429901,2	K562	blood:
7	chr3:100325407..100326196-chr3:100353394..100354270,2	MCF-7	breast:
8	chr3:100181513..100182449-chr3:100308116..100310031,6	MCF-7	breast:
9	chr3:100352243..100354477-chr3:100424707..100427239,2	MCF-7	breast:
10	chr3:100322114..100322780-chr3:100353316..100353989,3	MCF-7	breast:
11	chr3:99535346..99537040-chr3:100436340..100438429,2	K562	blood:
12	chr3:100181564..100184311-chr3:100308277..100310597,3	MCF-7	breast:
13	chr3:100120818..100123698-chr3:100370041..100372201,2	K562	blood:
14	chr3:100279818..100281392-chr3:100419411..100421780,2	K562	blood:
15	chr3:100181153..100182757-chr3:100352927..100354311,7	MCF-7	breast:
16	chr3:100432153..100434876-chr3:100437236..100438974,2	MCF-7	breast:
17	chr3:100353552..100356244-chr3:100358458..100360777,2	K562	blood:
18	chr3:100118375..100121332-chr3:100329278..100332064,2	K562	blood:
19	chr2:67550820..67551820-chr3:100427957..100428561,3	HCT-116	colon:
20	chr3:100321992..100322818-chr3:100353419..100354308,2	MCF-7	breast:
21	chr3:100358087..100360713-chr3:100362813..100364716,2	K562	blood:
22	chr3:100181696..100182432-chr3:100355242..100355805,2	MCF-7	breast:
23	chr3:100434706..100436343-chr3:100445572..100447869,2	K562	blood:
24	chr3:100181402..100182493-chr3:100308907..100310066,13	MCF-7	breast:
25	chr3:100322069..100322963-chr3:100515153..100515789,2	MCF-7	breast:
26	chr3:100322209..100326377-chr3:100427335..100430667,5	MCF-7	breast:
27	chr3:100325407..100326196-chr3:100353394..100354270,2	MCF-7	breast:
28	chr3:100432153..100434876-chr3:100437236..100438974,2	MCF-7	breast:
29	chr3:100120411..100122999-chr3:100364924..100367578,2	K562	blood:
30	chr3:100419966..100423130-chr3:100426813..100428964,3	K562	blood:
31	chr3:100325886..100329093-chr3:100426560..100431642,4	MCF-7	breast:
32	chr3:100432846..100436544-chr3:100436912..100439975,5	K562	blood:
33	chr3:100325466..100327241-chr3:100349090..100350621,2	K562	blood:
34	chr3:100372478..100376338-chr3:100378859..100382078,3	K562	blood:
35	chr3:100321003..100323549-chr3:100347554..100350487,3	MCF-7	breast:
36	chr1:73273811..73275334-chr3:100425817..100428133,2	MCF-7	breast:
37	chr17:57918588..57920867-chr3:100426772..100429347,2	MCF-7	breast:
38	chr3:100181471..100182427-chr3:100308979..100310073,6	K562	blood:
39	chr3:100428095..100432338-chr3:100432996..100435628,5	K562	blood:
40	chr3:100322090..100322923-chr3:100479827..100480358,2	MCF-7	breast:
41	chr3:100181722..100182327-chr3:100321776..100322610,2	MCF-7	breast:
42	chr3:100412832..100415800-chr3:100417725..100420372,2	K562	blood:
43	chr3:100325886..100329093-chr3:100426560..100431642,4	MCF-7	breast:
44	chr3:100348848..100350394-chr3:100351417..100354134,2	K562	blood:
45	chr1:151512640..151513443-chr3:100428519..100429048,2	Hela-S3	cervix:
46	chr3:100367436..100369530-chr3:100426605..100429472,2	MCF-7	breast:
47	chr3:100358087..100360713-chr3:100362813..100364716,2	K562	blood:
48	chr3:100437193..100438903-chr3:100441910..100444444,2	K562	blood:
49	chr12:56435446..56435990-chr3:100428103..100428866,2	Hela-S3	cervix:
50	chr3:100427539..100430990-chr3:100441684..100444095,3	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TMEM45A-1	chr3:100356146-100356419	NONHSAT090874
2	lnc-ABI3BP-1	chr3:100383894-100384320	NONHSAT090876
3	lnc-TMEM45A-1	chr3:100354384-100354670	NONHSAT090874

No data

Variant related genes	Relation type
TFG	TF binding region
GPR128	TF binding region
ENSG00000252989	TF binding region
GMFBP1	TF binding region
TFG	CpG island
GPR128	CpG island
ENSG00000252989	CpG island
GMFBP1	CpG island
ENSG00000206535	chromatin interactions
ENSG00000257449	chromatin interactions
ENSG00000144820	chromatin interactions
ENSG00000100983	chromatin interactions
ENSG00000199004	chromatin interactions
ENSG00000154174	chromatin interactions
ENSG00000101608	chromatin interactions
ENSG00000166889	chromatin interactions
ENSG00000236605	chromatin interactions
ENSG00000143367	chromatin interactions
ENSG00000184220	chromatin interactions
ENSG00000114354	chromatin interactions
ENSG00000232536	chromatin interactions
ENSG00000188938	chromatin interactions
ENSG00000252989	chromatin interactions
ENSG00000197728	chromatin interactions

Extended variants
information (count: 5725 )
Associated
traits (count: 62 )

Variant overlapped rSNPs/rCNVs (count:5725 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11923487	chr3:100299329-100299330	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs75612718	chr3:100299335-100299336	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs369445417	chr3:100299436-100299437	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs73141201	chr3:100299448-100299449	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs376406665	chr3:100299510-100299511	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs66512877	chr3:100299537-100299538	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs568248495	chr3:100299575-100299576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs535574777	chr3:100299622-100299623	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs140812814	chr3:100299647-100299648	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs377504093	chr3:100299660-100299661	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs190488416	chr3:100299666-100299667	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs386663879	chr3:100299856-100299857	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs7430001	chr3:100299857-100299858	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs573420900	chr3:100299860-100299861	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs563755349	chr3:100299897-100299898	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs192871078	chr3:100299952-100299953	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs555637721	chr3:100299953-100299954	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs7430040	chr3:100300072-100300073	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs541939754	chr3:100300142-100300143	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs144575910	chr3:100300196-100300197	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs138490125	chr3:100300198-100300199	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs183145413	chr3:100300222-100300223	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs564125882	chr3:100300267-100300268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs186627479	chr3:100300280-100300281	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs546920145	chr3:100300314-100300315	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs116370637	chr3:100300316-100300317	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs12630904	chr3:100300326-100300327	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs550638507	chr3:100300350-100300351	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs143035795	chr3:100300361-100300362	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs117097067	chr3:100300510-100300511	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs150253391	chr3:100300547-100300548	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs73143108	chr3:100300559-100300560	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs138887649	chr3:100300575-100300576	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs546707924	chr3:100300591-100300592	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs76422940	chr3:100300605-100300606	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs567133256	chr3:100300617-100300618	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs191461993	chr3:100300628-100300629	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs556067286	chr3:100300676-100300677	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs574138516	chr3:100300711-100300712	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs544848712	chr3:100300733-100300734	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs373687432	chr3:100300765-100300766	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs75489738	chr3:100300781-100300782	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs9842488	chr3:100300801-100300802	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs545923798	chr3:100300807-100300808	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs200215511	chr3:100300822-100300823	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs555747433	chr3:100300826-100300827	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs184524739	chr3:100300850-100300851	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs528128348	chr3:100300868-100300869	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs575523235	chr3:100300895-100300896	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs562042181	chr3:100300935-100300936	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:62)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Renal cell carcinoma	21668985	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Uveal melanoma	20484589	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Hirschsprung''s Disease	21712996	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
Neurodevelopmental disorder	22521361	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16608533	CNVD
Breast cancer	21785460	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD

Chromatin state (count:2254 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100241000-100299800	Weak transcription	Fetal Muscle Leg	muscle
2	chr3:100265800-100300600	Weak transcription	HepG2	liver
3	chr3:100276800-100309200	Weak transcription	NH-A	brain
4	chr3:100277600-100304200	Weak transcription	Ovary	ovary
5	chr3:100278200-100305800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr3:100281200-100300200	Weak transcription	Osteobl	bone
7	chr3:100283400-100300400	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr3:100283800-100299800	Weak transcription	Primary neutrophils fromperipheralblood	blood
9	chr3:100289400-100299400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr3:100289600-100300200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr3:100289600-100301000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr3:100290200-100300000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr3:100297200-100300600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr3:100297400-100300400	Weak transcription	Duodenum Mucosa	Duodenum
15	chr3:100297600-100303400	Weak transcription	Fetal Stomach	stomach
16	chr3:100297800-100300200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr3:100297800-100300400	Weak transcription	Liver	Liver
18	chr3:100298600-100309000	Weak transcription	Pancreas	Pancrea
19	chr3:100298800-100300400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr3:100298800-100301800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
21	chr3:100298800-100301800	Weak transcription	Placenta Amnion	Placenta Amnion
22	chr3:100300000-100300600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr3:100300000-100301800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
24	chr3:100300200-100300800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr3:100300200-100301600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
26	chr3:100300200-100301600	Enhancers	Osteobl	bone
27	chr3:100300400-100300600	Enhancers	Liver	Liver
28	chr3:100300400-100300800	Enhancers	Duodenum Mucosa	Duodenum
29	chr3:100300400-100301000	Enhancers	Muscle Satellite Cultured Cells	--
30	chr3:100300400-100301600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
31	chr3:100300600-100300800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
32	chr3:100300600-100309200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
33	chr3:100300800-100303400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
34	chr3:100301000-100301200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr3:100301600-100309000	Weak transcription	Osteobl	bone
36	chr3:100301800-100302200	Enhancers	Placenta Amnion	Placenta Amnion
37	chr3:100302200-100306200	Weak transcription	Placenta Amnion	Placenta Amnion
38	chr3:100303400-100304200	Enhancers	Fetal Stomach	stomach
39	chr3:100303800-100304200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr3:100304200-100309200	Weak transcription	Fetal Stomach	stomach
41	chr3:100305000-100309200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
42	chr3:100305800-100306000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
43	chr3:100307200-100307400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr3:100307400-100309000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
45	chr3:100308200-100309000	Weak transcription	Muscle Satellite Cultured Cells	--
46	chr3:100308800-100309200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
47	chr3:100308800-100312000	Enhancers	Fetal Intestine Large	intestine
48	chr3:100309000-100309200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr3:100309000-100309200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr3:100309000-100309200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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