Variant report

Variant	nsv432480
Chromosome Location	chr3:121355723-121629928
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2798)
CpG islands
(count:2815)
Chromatin interactive
region (count:185)
LncRNA
region (count:8)
Mature miRNA
region (count: 0)
miRNA target
sites (count:4)

(count:2798 , 50 per page) page: 1 2 3 4 5 6 7 ... 56

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr3:121602426-121602710	K562	blood:	n/a	n/a
2	ARID3A	chr3:121553892-121554340	HepG2	liver:	n/a	n/a
3	ARID3A	chr3:121555327-121555897	K562	blood:	n/a	n/a
4	ARID3A	chr3:121462983-121463054	K562	blood:	n/a	n/a
5	ARID3A	chr3:121361606-121361746	HepG2	liver:	n/a	n/a
6	ARID3A	chr3:121602415-121602687	HepG2	liver:	n/a	n/a
7	ARID3A	chr3:121523332-121523538	K562	blood:	n/a	n/a
8	ARID3A	chr3:121467807-121469274	HepG2	liver:	n/a	n/a
9	ARID3A	chr3:121553786-121554196	K562	blood:	n/a	n/a
10	ARID3A	chr3:121514064-121514134	K562	blood:	n/a	n/a
11	ARID3A	chr3:121468403-121468989	K562	blood:	n/a	n/a
12	ATF1	chr3:121468484-121469028	K562	blood:	n/a	chr3:121468524-121468538
13	ATF2	chr3:121553346-121554690	GM12878	blood:	n/a	n/a
14	ATF2	chr3:121379094-121380020	GM12878	blood:	n/a	n/a
15	ATF2	chr3:121553559-121554147	GM12878	blood:	n/a	n/a
16	ATF2	chr3:121454131-121454588	GM12878	blood:	n/a	n/a
17	ATF2	chr3:121468395-121469101	GM12878	blood:	n/a	chr3:121468524-121468538
18	ATF2	chr3:121528006-121528576	GM12878	blood:	n/a	n/a
19	ATF2	chr3:121453881-121454600	GM12878	blood:	n/a	n/a
20	ATF2	chr3:121442824-121443362	GM12878	blood:	n/a	n/a
21	ATF2	chr3:121468423-121468994	H1-hESC	embryonic stem cell:	n/a	chr3:121468524-121468538
22	ATF2	chr3:121373211-121373782	GM12878	blood:	n/a	n/a
23	ATF2	chr3:121528089-121528693	GM12878	blood:	n/a	n/a
24	ATF2	chr3:121467974-121468305	H1-hESC	embryonic stem cell:	n/a	n/a
25	ATF2	chr3:121379019-121380056	GM12878	blood:	n/a	n/a
26	ATF3	chr3:121468342-121468877	A549	lung:	n/a	chr3:121468527-121468547 chr3:121468567-121468576
27	BACH1	chr3:121553761-121554262	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr3:121508656-121508683	K562	blood:	n/a	n/a
29	BACH1	chr3:121554053-121554074	K562	blood:	n/a	n/a
30	BACH1	chr3:121370567-121370886	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr3:121468537-121468931	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr3:121370532-121370903	K562	blood:	n/a	n/a
33	BATF	chr3:121553976-121554220	GM12878	blood:	n/a	n/a
34	BATF	chr3:121553884-121554288	GM12878	blood:	n/a	n/a
35	BATF	chr3:121409958-121410240	GM12878	blood:	n/a	chr3:121410034-121410045
36	BATF	chr3:121411145-121411408	GM12878	blood:	n/a	n/a
37	BATF	chr3:121373310-121373733	GM12878	blood:	n/a	n/a
38	BATF	chr3:121454203-121454501	GM12878	blood:	n/a	n/a
39	BATF	chr3:121373309-121373740	GM12878	blood:	n/a	n/a
40	BATF	chr3:121454227-121454518	GM12878	blood:	n/a	n/a
41	BATF	chr3:121528193-121528452	GM12878	blood:	n/a	n/a
42	BATF	chr3:121409910-121410215	GM12878	blood:	n/a	chr3:121410034-121410045
43	BATF	chr3:121528186-121528478	GM12878	blood:	n/a	n/a
44	BCL11A	chr3:121528141-121528529	GM12878	blood:	n/a	chr3:121528342-121528351
45	BCL11A	chr3:121454226-121454493	GM12878	blood:	n/a	n/a
46	BCL3	chr3:121468324-121469213	A549	lung:	n/a	chr3:121468829-121468838 chr3:121468566-121468575 chr3:121468400-121468413
47	BCL3	chr3:121486039-121486304	GM12878	blood:	n/a	n/a
48	BCLAF1	chr3:121378976-121380116	GM12878	blood:	n/a	n/a
49	BCLAF1	chr3:121553367-121554432	GM12878	blood:	n/a	chr3:121553872-121553885 chr3:121553949-121553958
50	BCLAF1	chr3:121442806-121443409	GM12878	blood:	n/a	n/a

(count:2815 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr3:121613396-121613446	ProgFib	skin:	n/a
2	chr3:121612956-121613006	AG04449	skin:	fetal
3	chr3:121554169-121554219	HMEC	breast:	n/a
4	chr3:121554166-121554216	LNCaP	prostate:	n/a
5	chr3:121379745-121379795	NB4	blood:	n/a
6	chr3:121512184-121512234	BJ	skin:	n/a
7	chr3:121379745-121379795	HRE	kidney:	n/a
8	chr3:121468552-121468602	GM19239	blood:	n/a
9	chr3:121512184-121512234	HCF	heart:	n/a
10	chr3:121613396-121613446	ProgFib	skin:	n/a
11	chr3:121612956-121613006	AG04449	skin:	fetal
12	chr3:121554169-121554219	HMEC	breast:	n/a
13	chr3:121554166-121554216	LNCaP	prostate:	n/a
14	chr3:121379745-121379795	NB4	blood:	n/a
15	chr3:121512184-121512234	BJ	skin:	n/a
16	chr3:121379745-121379795	HRE	kidney:	n/a
17	chr3:121468552-121468602	GM19239	blood:	n/a
18	chr3:121512184-121512234	HCF	heart:	n/a
19	chr3:121612991-121613041	HL-60	blood:	n/a
20	chr3:121553940-121553990	NB4	blood:	n/a
21	chr3:121554166-121554216	BJ	skin:	n/a
22	chr3:121553940-121553990	ECC-1	luminal epithelium:	n/a
23	chr3:121468945-121468995	PFSK-1	brain:	n/a
24	chr3:121612956-121613006	HMEC	breast:	n/a
25	chr3:121468706-121468756	HRPEpiC	eye:	n/a
26	chr3:121379791-121379841	AG04449	skin:	fetal
27	chr3:121380233-121380283	HCM	heart:	n/a
28	chr3:121553721-121553771	HRCEpiC	kidney:	n/a
29	chr3:121556543-121556593	HL-60	blood:	n/a
30	chr3:121468093-121468143	NHBE	bronchial:	n/a
31	chr3:121554094-121554144	HRPEpiC	eye:	n/a
32	chr3:121553361-121553411	HUVEC	blood vessel:	n/a
33	chr3:121468720-121468770	NH-A	brain:	n/a
34	chr3:121453622-121453672	BJ	skin:	n/a
35	chr3:121553586-121553636	SAEC	small airway:	n/a
36	chr3:121554169-121554219	PANC-1	pancreas:	n/a
37	chr3:121556543-121556593	GM06990	blood:	n/a
38	chr3:121468552-121468602	HNPCEpiC	eye:	n/a
39	chr3:121472567-121472617	HCF	heart:	n/a
40	chr3:121553721-121553771	MCF10A-Er-Src	breast:	n/a
41	chr3:121380236-121380286	HRPEpiC	eye:	n/a
42	chr3:121554094-121554144	HCM	heart:	n/a
43	chr3:121612039-121612089	HAEpiC	amniotic membrane:	n/a
44	chr3:121613396-121613446	HEK293	kidney:	embryo
45	chr3:121554012-121554062	SK-N-SH_RA	brain:	n/a
46	chr3:121553721-121553771	IMR90	lung:	fetal
47	chr3:121612039-121612089	HUVEC	blood vessel:	n/a
48	chr3:121468093-121468143	ovcar-3	ovarian:	n/a
49	chr3:121468027-121468077	SK-N-SH_RA	brain:	n/a
50	chr3:121553361-121553411	HPAEpiC	pulmonary alveolar:	n/a

(count:185 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr3:121547606..121551491-chr3:121552024..121556641,8	K562	blood:
2	chr3:121465799..121468529-chr3:121552939..121555166,2	MCF-7	breast:
3	chr3:121402372..121403987-chr3:121435580..121437205,2	MCF-7	breast:
4	chr3:121552768..121555553-chr3:121556073..121559770,4	K562	blood:
5	chr3:121374281..121376977-chr3:121381116..121385045,3	MCF-7	breast:
6	chr3:121468824..121470576-chr3:121473102..121475078,2	K562	blood:
7	chr3:121467554..121468232-chr6:170151572..170152315,2	Hela-S3	cervix:
8	chr3:121378883..121381780-chr3:121382077..121384890,2	K562	blood:
9	chr19:58897685..58898333-chr3:121553940..121554762,2	NB4	blood:
10	chr3:121537691..121539463-chr3:121547054..121549794,2	K562	blood:
11	chr3:121263260..121265570-chr3:121468289..121470216,2	K562	blood:
12	chr3:121465792..121467849-chr3:121506947..121509810,2	MCF-7	breast:
13	chr3:121571415..121571970-chr3:121831459..121832214,2	MCF-7	breast:
14	chr3:121515767..121519449-chr3:121522232..121524436,3	MCF-7	breast:
15	chr3:121461219..121463948-chr3:121466247..121469994,3	K562	blood:
16	chr3:121506422..121509070-chr8:140207889..140210242,2	MCF-7	breast:
17	chr3:121553730..121556319-chr3:121561378..121563069,2	MCF-7	breast:
18	chr3:121451393..121453533-chr3:121465182..121467129,2	K562	blood:
19	chr15:90776770..90777664-chr3:121467083..121467876,2	Hela-S3	cervix:
20	chr3:121552259..121553812-chr3:121688554..121691121,2	MCF-7	breast:
21	chr3:121541912..121545321-chr3:121545405..121548683,3	MCF-7	breast:
22	chr3:121467271..121469348-chr3:121476244..121478922,2	MCF-7	breast:
23	chr3:121447927..121450060-chr3:121456793..121458393,2	K562	blood:
24	chr3:121559897..121561834-chr3:121567497..121569683,2	MCF-7	breast:
25	chr3:121420842..121422524-chr3:121426480..121428817,2	MCF-7	breast:
26	chr13:111365321..111365930-chr3:121468002..121468980,2	Hela-S3	cervix:
27	chr3:121523456..121525541-chr3:121550635..121553696,3	K562	blood:
28	chr3:121417854..121420828-chr3:121422749..121424314,2	K562	blood:
29	chr3:121557805..121560130-chr3:121563669..121566331,2	MCF-7	breast:
30	chr3:121371073..121373945-chr3:121419380..121420928,2	MCF-7	breast:
31	chr3:121602683..121606791-chr3:121612031..121615875,3	MCF-7	breast:
32	chr3:121468842..121470508-chr3:121478422..121481372,2	MCF-7	breast:
33	chr3:121402372..121403987-chr3:121435580..121437205,2	MCF-7	breast:
34	chr3:121262548..121264431-chr3:121401420..121403788,2	K562	blood:
35	chr3:121544640..121546526-chr3:121557877..121559785,2	MCF-7	breast:
36	chr3:121449263..121451677-chr3:121468938..121471042,2	K562	blood:
37	chr3:121475069..121477684-chr3:121478274..121481254,3	MCF-7	breast:
38	chr17:685075..685674-chr3:121468156..121469032,2	Hela-S3	cervix:
39	chr3:121410605..121412788-chr3:121413603..121415735,2	MCF-7	breast:
40	chr3:121566038..121567568-chr3:121569275..121571033,2	K562	blood:
41	chr3:121429333..121431027-chr3:121468006..121470024,2	MCF-7	breast:
42	chr3:121355706..121357313-chr3:121467523..121469117,2	K562	blood:
43	chr3:121479199..121481654-chr3:121483529..121486442,3	K562	blood:
44	chr3:121601998..121602764-chr3:121714103..121714956,3	MCF-7	breast:
45	chr3:121462008..121465920-chr3:121468429..121472755,5	MCF-7	breast:
46	chr3:121574242..121575122-chr3:121708627..121709453,3	MCF-7	breast:
47	chr3:121585044..121587852-chr3:121590629..121592381,2	K562	blood:
48	chr3:121503081..121505086-chr3:121506757..121508419,2	MCF-7	breast:
49	chr3:121468455..121470590-chr3:121475963..121478336,3	MCF-7	breast:
50	chr3:121417854..121420828-chr3:121422749..121424314,2	K562	blood:

(count:8 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-EAF2-2	chr3:121487691-121488674	l_2448_chr3:121487690-121490825_testes
2	lnc-GOLGB1-1	chr3:121376829-121377194	NONHSAT091478
3	lnc-GOLGB1-2	chr3:121372843-121373143	NONHSAT091474
4	lnc-GOLGB1-3	chr3:121552783-121553326	NONHSAT091482
5	lnc-EAF2-2	chr3:121489799-121490825	l_2448_chr3:121487690-121490825_testes
6	lnc-GOLGB1-1	chr3:121379667-121379750	NONHSAT091478
7	lnc-EAF2-3	chr3:121468132-121470030	NONHSAT091480
8	lnc-GOLGB1-3	chr3:121553813-121553839	NONHSAT091482

No data

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	IQCB1	hsa-miR-98-5p	chr3:121489039-121489033
2	GOLGB1	hsa-miR-197-3p	chr3:121382120-121382141
3	IQCB1	hsa-miR-98-5p	chr3:121489033-121489056
4	GOLGB1	hsa-miR-197-3p	chr3:121382796-121382817

Variant related genes	Relation type
HCLS1	TF binding region
GOLGB1	TF binding region
RNU4-62P	TF binding region
RN7SL172P	TF binding region
SLC15A2	TF binding region
IQCB1	TF binding region
EAF2	TF binding region
HCLS1	CpG island
GOLGB1	CpG island
RNU4-62P	CpG island
RN7SL172P	CpG island
SLC15A2	CpG island
IQCB1	CpG island
EAF2	CpG island
ENSG00000086061	chromatin interactions
ENSG00000171861	chromatin interactions
ENSG00000259802	chromatin interactions
ENSG00000137074	chromatin interactions
ENSG00000184786	chromatin interactions
ENSG00000114023	chromatin interactions
ENSG00000143458	chromatin interactions
ENSG00000180353	chromatin interactions
ENSG00000262728	chromatin interactions
ENSG00000051341	chromatin interactions
ENSG00000134905	chromatin interactions
ENSG00000160124	chromatin interactions
ENSG00000103254	chromatin interactions
ENSG00000157557	chromatin interactions
ENSG00000185043	chromatin interactions
ENSG00000221869	chromatin interactions
ENSG00000132002	chromatin interactions
ENSG00000173230	chromatin interactions
ENSG00000225697	chromatin interactions
ENSG00000266640	chromatin interactions
ENSG00000206652	chromatin interactions
ENSG00000183208	chromatin interactions
ENSG00000145088	chromatin interactions
ENSG00000173226	chromatin interactions
ENSG00000243544	chromatin interactions
ENSG00000145495	chromatin interactions
ENSG00000083845	chromatin interactions
ENSG00000070269	chromatin interactions
ENSG00000222057	chromatin interactions
ENSG00000163755	chromatin interactions
ENSG00000179933	chromatin interactions
ENSG00000069424	chromatin interactions
ENSG00000100813	chromatin interactions
ENSG00000152291	chromatin interactions
ENSG00000130023	chromatin interactions
ENSG00000167699	chromatin interactions
ENSG00000153487	chromatin interactions
ENSG00000198826	chromatin interactions
ENSG00000163406	chromatin interactions

Extended variants
information (count: 9642 )
Associated
traits (count: 61 )

Variant overlapped rSNPs/rCNVs (count:9642 , 50 per page) page: 1 2 3 4 5 6 7 ... 193

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9809114	chr3:121355723-121355724	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs539363398	chr3:121355752-121355753	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs111371802	chr3:121355763-121355764	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs112339997	chr3:121355772-121355773	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs534365333	chr3:121355823-121355824	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs557809299	chr3:121355834-121355835	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs571402854	chr3:121355841-121355842	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs375950186	chr3:121355919-121355920	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs552545732	chr3:121355932-121355933	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs375467328	chr3:121355969-121355970	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs557611861	chr3:121355983-121355984	Active TSS Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs368893881	chr3:121356006-121356007	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs147129061	chr3:121356008-121356009	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs144275149	chr3:121356016-121356017	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs543316141	chr3:121356027-121356028	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs34767273	chr3:121356062-121356063	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs372191150	chr3:121356071-121356072	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs139861864	chr3:121356072-121356073	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs142478875	chr3:121356079-121356080	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs569138301	chr3:121356080-121356081	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs35745057	chr3:121356084-121356085	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs371758156	chr3:121356095-121356096	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs374974934	chr3:121356111-121356112	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs371935774	chr3:121356137-121356138	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs553874090	chr3:121356138-121356139	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs543164479	chr3:121356145-121356146	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs563150310	chr3:121356149-121356150	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs190335024	chr3:121356162-121356163	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs570807495	chr3:121356207-121356208	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs375072179	chr3:121356210-121356211	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs549255720	chr3:121356231-121356232	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs568809189	chr3:121356234-121356235	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs150241727	chr3:121356238-121356239	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs528071847	chr3:121356276-121356277	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs534874861	chr3:121356301-121356302	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs537735781	chr3:121356316-121356317	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs557614009	chr3:121356330-121356331	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs9289172	chr3:121356368-121356369	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs63029362	chr3:121356394-121356395	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs78740052	chr3:121356395-121356396	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs181117448	chr3:121356421-121356422	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs373343888	chr3:121356443-121356444	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs557550651	chr3:121356504-121356505	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs567851639	chr3:121356545-121356546	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs56314138	chr3:121356656-121356657	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs553609092	chr3:121356708-121356709	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs138907395	chr3:121356710-121356711	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs74746356	chr3:121356719-121356720	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs112102372	chr3:121356732-121356733	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs184922984	chr3:121356769-121356770	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:61)

Disease	PMID	Source
Basal cell lymphoma	17053054	CNVD
Esophageal cancer	21851588	CNVD
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Cancer	21183584	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Bipolar disorder	20877625	CNVD
Bipolar disorder	21956041	CNVD
Bipolar disorder	22241247	CNVD
Biliary cancer	18923514	CNVD
Prostate cancer	21965145	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Cervical cancer	21062161	CNVD
Squamous cell cancer	20885788	CNVD
Melanoma	18172304	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Bipolar disorder	18458673	CNVD
Breast cancer	22032731	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Breast cancer	16461572	CNVD
Neuroblastoma	17533364	CNVD
microdeletion syndrome	22180640	CNVD
Cervical Cancer	21857958	CNVD
Melanoma	21693616	CNVD
Lung cancer	21426551	CNVD
Cancer	21637783	CNVD
Cervical cancer	21063398	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oral cancer	21386901	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	22065749	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Developmental delay	22180640	CNVD
Multiple myeloma	17550852	CNVD
Basal cell lymphoma	21115979	CNVD
Ovarian cancer	22174824	CNVD
lymphocytic leukemia	21291569	CNVD
small cell lung cancer	20016488	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Autism	22241247	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:6916 , 50 per page) page: 1 2 3 4 5 6 7 ... 139

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:121345600-121376800	Weak transcription	Esophagus	oesophagus
2	chr3:121347000-121378000	Weak transcription	Right Ventricle	heart
3	chr3:121347200-121364400	Strong transcription	Primary B cells from cord blood	blood
4	chr3:121347400-121367200	Weak transcription	Rectal Smooth Muscle	rectum
5	chr3:121347600-121359400	Strong transcription	Primary T cells from cord blood	blood
6	chr3:121347600-121364600	Strong transcription	Primary neutrophils fromperipheralblood	blood
7	chr3:121347600-121364600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr3:121347600-121364600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr3:121347800-121364600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr3:121348000-121364600	Strong transcription	Primary B cells from peripheral blood	blood
11	chr3:121348000-121364600	Strong transcription	Primary T cells fromperipheralblood	blood
12	chr3:121348000-121381800	Weak transcription	Aorta	Aorta
13	chr3:121348200-121364600	Strong transcription	Primary monocytes fromperipheralblood	blood
14	chr3:121348400-121357400	Strong transcription	Spleen	Spleen
15	chr3:121348400-121364600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr3:121348400-121364600	Strong transcription	Monocytes-CD14+_RO01746	blood
17	chr3:121348800-121358600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
18	chr3:121348800-121363000	Weak transcription	Left Ventricle	heart
19	chr3:121348800-121364400	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr3:121348800-121367200	Weak transcription	Pancreas	Pancrea
21	chr3:121349000-121356600	Weak transcription	Brain Anterior Caudate	brain
22	chr3:121349000-121359000	Strong transcription	Primary hematopoietic stem cells	blood
23	chr3:121349000-121364600	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
24	chr3:121349000-121364600	Strong transcription	Dnd41	blood
25	chr3:121349000-121378000	Weak transcription	Fetal Stomach	stomach
26	chr3:121349200-121359200	Strong transcription	Primary T helper cells PMA-I stimulated	--
27	chr3:121349200-121362000	Weak transcription	Rectal Mucosa Donor 31	rectum
28	chr3:121349200-121364200	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
29	chr3:121349400-121364600	Strong transcription	Primary T helper cells fromperipheralblood	blood
30	chr3:121349400-121367000	Weak transcription	Skeletal Muscle Male	skeletal muscle
31	chr3:121349600-121358600	Strong transcription	Thymus	Thymus
32	chr3:121349600-121364600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr3:121349800-121359400	Strong transcription	Primary T helper naive cells from peripheral blood	blood
34	chr3:121349800-121367000	Weak transcription	Skeletal Muscle Female	skeletal muscle
35	chr3:121350000-121357400	Strong transcription	Liver	Liver
36	chr3:121350000-121364600	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr3:121350000-121364600	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
38	chr3:121350200-121357400	Strong transcription	Placenta	Placenta
39	chr3:121350400-121355800	Strong transcription	Sigmoid Colon	Sigmoid Colon
40	chr3:121350400-121357400	Strong transcription	Rectal Mucosa Donor 29	rectum
41	chr3:121351000-121364600	Strong transcription	GM12878-XiMat	blood
42	chr3:121351000-121382800	Weak transcription	Small Intestine	intestine
43	chr3:121351400-121381400	Weak transcription	Gastric	stomach
44	chr3:121351600-121360800	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
45	chr3:121351800-121358600	Strong transcription	Primary T killer memory cells from peripheral blood	blood
46	chr3:121351800-121370400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
47	chr3:121352800-121357000	Weak transcription	Stomach Smooth Muscle	stomach
48	chr3:121353400-121356600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr3:121353400-121364400	Strong transcription	Fetal Thymus	thymus
50	chr3:121353400-121376000	Weak transcription	Lung	lung

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