Variant report

Variant	nsv432643
Chromosome Location	chr4:152335395-152417635
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:152339395-152339967	HepG2	liver:	n/a	n/a
2	ATF2	chr4:152339076-152339368	H1-hESC	embryonic stem cell:	n/a	n/a
3	ATF2	chr4:152410658-152411028	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr4:152405480-152406188	H1-hESC	embryonic stem cell:	n/a	n/a
5	ATF2	chr4:152405446-152406295	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF3	chr4:152405961-152406194	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr4:152337183-152337311	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr4:152410762-152410960	H1-hESC	embryonic stem cell:	n/a	n/a
9	BACH1	chr4:152405613-152406248	H1-hESC	embryonic stem cell:	n/a	n/a
10	BCL11A	chr4:152405884-152406142	H1-hESC	embryonic stem cell:	n/a	n/a
11	BCL11A	chr4:152405934-152406177	H1-hESC	embryonic stem cell:	n/a	n/a
12	BHLHE40	chr4:152339803-152339854	HepG2	liver:	n/a	n/a
13	BRCA1	chr4:152355613-152356038	Hela-S3	cervix:	n/a	chr4:152356021-152356028
14	CBX3	chr4:152338955-152339906	HCT-116	colon:	n/a	n/a
15	CBX3	chr4:152405804-152406321	HCT-116	colon:	n/a	n/a
16	CBX3	chr4:152405800-152406344	HCT-116	colon:	n/a	chr4:152406332-152406343
17	CEBPB	chr4:152370238-152370429	K562	blood:	n/a	n/a
18	CEBPB	chr4:152407325-152407470	HepG2	liver:	n/a	chr4:152407430-152407441
19	CEBPB	chr4:152393905-152394194	H1-hESC	embryonic stem cell:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
20	CEBPB	chr4:152393945-152394200	K562	blood:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
21	CEBPB	chr4:152390158-152390732	ECC-1	luminal epithelium:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
22	CEBPB	chr4:152380372-152381023	MCF-7	breast:	n/a	n/a
23	CEBPB	chr4:152393927-152394194	A549	lung:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
24	CEBPB	chr4:152393906-152394313	MCF-7	breast:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
25	CEBPB	chr4:152337112-152337525	ECC-1	luminal epithelium:	n/a	n/a
26	CEBPB	chr4:152393918-152394289	MCF-7	breast:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
27	CEBPB	chr4:152340386-152340692	Hela-S3	cervix:	n/a	n/a
28	CEBPB	chr4:152390238-152390676	HepG2	liver:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
29	CEBPB	chr4:152389966-152390667	MCF-7	breast:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
30	CEBPB	chr4:152355791-152356028	HepG2	liver:	n/a	n/a
31	CEBPB	chr4:152337088-152337496	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr4:152340382-152340651	ECC-1	luminal epithelium:	n/a	n/a
33	CEBPB	chr4:152390353-152390655	A549	lung:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
34	CEBPB	chr4:152380497-152381013	MCF-7	breast:	n/a	n/a
35	CEBPB	chr4:152405715-152406306	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr4:152393893-152394240	IMR90	lung:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
37	CEBPB	chr4:152390218-152390712	ECC-1	luminal epithelium:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
38	CEBPB	chr4:152340364-152340680	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr4:152393909-152394234	Hela-S3	cervix:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074
40	CEBPB	chr4:152390191-152390711	MCF-7	breast:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
41	CEBPB	chr4:152340403-152340641	HepG2	liver:	n/a	n/a
42	CEBPB	chr4:152389891-152390622	Hela-S3	cervix:	n/a	chr4:152390361-152390372 chr4:152390438-152390449 chr4:152390359-152390370 chr4:152390438-152390451 chr4:152390359-152390372 chr4:152390438-152390451
43	CEBPB	chr4:152339277-152339933	HCT-116	colon:	n/a	n/a
44	CEBPB	chr4:152340333-152340646	ECC-1	luminal epithelium:	n/a	n/a
45	CEBPB	chr4:152355548-152356160	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr4:152407290-152407617	IMR90	lung:	n/a	chr4:152407430-152407441
47	CEBPB	chr4:152355688-152356080	IMR90	lung:	n/a	n/a
48	CEBPB	chr4:152340398-152340702	IMR90	lung:	n/a	n/a
49	CEBPB	chr4:152355827-152356043	MCF-7	breast:	n/a	n/a
50	CEBPB	chr4:152393879-152394236	HepG2	liver:	n/a	chr4:152394063-152394074 chr4:152394065-152394074 chr4:152394063-152394076 chr4:152394065-152394074 chr4:152394065-152394074 chr4:152394065-152394076 chr4:152394063-152394076 chr4:152394065-152394074

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:152376761-152376811	HPAEpiC	pulmonary alveolar:	n/a
2	chr4:152345440-152345490	T-47D	breast:	n/a
3	chr4:152376761-152376811	GM12891	blood:	n/a
4	chr4:152376761-152376811	HIPEpiC	eye:	n/a
5	chr4:152405174-152405224	GM19239	blood:	n/a
6	chr4:152364959-152365009	HEK293	kidney:	embryo
7	chr4:152405174-152405224	GM12892	blood:	n/a
8	chr4:152364959-152365009	SK-N-MC	brain:	n/a
9	chr4:152364959-152365009	NT2-D1	testis:	n/a
10	chr4:152405174-152405224	NB4	blood:	n/a
11	chr4:152364959-152365009	HNPCEpiC	eye:	n/a
12	chr4:152345440-152345490	NHBE	bronchial:	n/a
13	chr4:152345440-152345490	SAEC	small airway:	n/a
14	chr4:152405174-152405224	Hepatocyte	liver:	n/a
15	chr4:152351973-152352023	U87	brain:	n/a
16	chr4:152364959-152365009	ECC-1	luminal epithelium:	n/a
17	chr4:152345440-152345490	IMR90	lung:	fetal
18	chr4:152376761-152376811	NT2-D1	testis:	n/a
19	chr4:152405174-152405224	AG10803	skin:	n/a
20	chr4:152364959-152365009	HCF	heart:	n/a
21	chr4:152345440-152345490	HEEpiC	esophagus:	n/a
22	chr4:152405174-152405224	HEK293	kidney:	embryo
23	chr4:152376761-152376811	HNPCEpiC	eye:	n/a
24	chr4:152345440-152345490	AG04450	lung:	fetal
25	chr4:152376761-152376811	LNCaP	prostate:	n/a
26	chr4:152405174-152405224	RPTEC	kidney:	n/a
27	chr4:152364959-152365009	HCT-116	colon:	n/a
28	chr4:152376761-152376811	MCF-7	breast:	n/a
29	chr4:152376761-152376811	CMK	blood:	n/a
30	chr4:152345440-152345490	HUVEC	blood vessel:	n/a
31	chr4:152405174-152405224	PFSK-1	brain:	n/a
32	chr4:152351973-152352023	GM12878	blood:	n/a
33	chr4:152351973-152352023	NHDF-neo	bronchial:	n/a
34	chr4:152345440-152345490	Hepatocyte	liver:	n/a
35	chr4:152364959-152365009	T-47D	breast:	n/a
36	chr4:152376761-152376811	ECC-1	luminal epithelium:	n/a
37	chr4:152351973-152352023	GM19239	blood:	n/a
38	chr4:152364959-152365009	H1-hESC	embryonic stem cell:	embryo
39	chr4:152345440-152345490	Caco-2	colon:	n/a
40	chr4:152351973-152352023	HCF	heart:	n/a
41	chr4:152376761-152376811	MCF10A-Er-Src	breast:	n/a
42	chr4:152364959-152365009	HPAEpiC	pulmonary alveolar:	n/a
43	chr4:152364959-152365009	NHDF-neo	bronchial:	n/a
44	chr4:152351973-152352023	SK-N-MC	brain:	n/a
45	chr4:152405174-152405224	T-47D	breast:	n/a
46	chr4:152364959-152365009	AG04450	lung:	fetal
47	chr4:152405174-152405224	HepG2	liver:	n/a
48	chr4:152345440-152345490	SK-N-MC	brain:	n/a
49	chr4:152405174-152405224	U87	brain:	n/a
50	chr4:152376761-152376811	T-47D	breast:	n/a

No.	Distal block	Cell Line	Cell type
1	chr4:152337823..152339848-chr4:152340887..152343384,2	K562	blood:
2	chr4:152327541..152330018-chr4:152354907..152357662,2	MCF-7	breast:
3	chr4:152410378..152410940-chr4:152525127..152525930,2	MCF-7	breast:
4	chr4:152342878..152344921-chr4:152349555..152352134,2	MCF-7	breast:
5	chr4:152389958..152392173-chr4:152395343..152398079,2	K562	blood:
6	chr4:152392114..152395056-chr4:152400714..152402332,2	MCF-7	breast:
7	chr4:152391915..152393876-chr4:152394170..152396250,2	MCF-7	breast:
8	chr4:152389958..152393083-chr4:152394251..152396843,3	K562	blood:
9	chr4:152371542..152374443-chr4:152375598..152378565,2	MCF-7	breast:
10	chr4:152330012..152332003-chr4:152378597..152381385,2	MCF-7	breast:
11	chr4:152346298..152349157-chr4:152351950..152355838,3	MCF-7	breast:
12	chr4:152392114..152395056-chr4:152400714..152402332,2	MCF-7	breast:
13	chr4:152389958..152392173-chr4:152395343..152398079,2	K562	blood:
14	chr4:152334377..152337765-chr4:152341477..152345908,4	K562	blood:
15	chr4:152348422..152350368-chr4:152354177..152356285,2	K562	blood:
16	chr4:152342878..152344921-chr4:152349555..152352134,2	MCF-7	breast:
17	chr4:152348422..152350368-chr4:152354177..152356285,2	K562	blood:
18	chr4:152393445..152396231-chr4:152399034..152401565,3	MCF-7	breast:
19	chr4:152334377..152337765-chr4:152341477..152345908,4	K562	blood:
20	chr4:152337823..152339848-chr4:152340887..152343384,2	K562	blood:
21	chr4:152405946..152407616-chr4:152409141..152411607,2	MCF-7	breast:
22	chr4:152389958..152393083-chr4:152394251..152396843,3	K562	blood:
23	chr4:152393445..152396231-chr4:152399034..152401565,3	MCF-7	breast:
24	chr4:152371542..152374443-chr4:152375598..152378565,2	MCF-7	breast:
25	chr4:152346298..152349157-chr4:152351950..152355838,3	MCF-7	breast:
26	chr4:152391915..152393876-chr4:152394170..152396250,2	MCF-7	breast:
27	chr16:50936343..50936843-chr4:152377370..152378176,2	K562	blood:
28	chr4:152405946..152407616-chr4:152409141..152411607,2	MCF-7	breast:
29	chr4:152328180..152331870-chr4:152350239..152352902,3	MCF-7	breast:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FAM160A1-8	chr4:152375853-152375960	NONHSAT098760
2	lnc-FAM160A1-8	chr4:152375853-152375960	NONHSAT098761
3	lnc-FAM160A1-8	chr4:152403676-152403800	NONHSAT098760

Variant related genes	Relation type
FAM160A1	TF binding region
FAM160A1	CpG island
ENSG00000164142	chromatin interactions
ENSG00000251611	chromatin interactions

Extended variants
information (count: 2697 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:2697 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs536552890	chr4:152335441-152335442	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs554640767	chr4:152335475-152335476	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs573205683	chr4:152335483-152335484	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs142909310	chr4:152335494-152335495	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs150662889	chr4:152335497-152335498	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs2724557	chr4:152335502-152335503	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs374318618	chr4:152335506-152335507	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs140150698	chr4:152335561-152335562	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs563100059	chr4:152335577-152335578	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs181645611	chr4:152335588-152335589	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs542525000	chr4:152335601-152335602	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs560703585	chr4:152335672-152335673	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs377025824	chr4:152335682-152335683	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs2709812	chr4:152335749-152335750	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs143896202	chr4:152335761-152335762	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs146878899	chr4:152335809-152335810	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs550457419	chr4:152335813-152335814	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs140755669	chr4:152335872-152335873	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs538888260	chr4:152335884-152335885	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs186218836	chr4:152336027-152336028	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs149670261	chr4:152336036-152336037	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs190149145	chr4:152336062-152336063	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs534232639	chr4:152336067-152336068	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs559000815	chr4:152336090-152336091	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs529175736	chr4:152336156-152336157	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs181584125	chr4:152336268-152336269	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs200504333	chr4:152336284-152336285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs556445257	chr4:152336334-152336335	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs78139157	chr4:152336335-152336336	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs548300657	chr4:152336336-152336337	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs560885596	chr4:152336343-152336344	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs377236425	chr4:152336347-152336348	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs12504659	chr4:152336348-152336349	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs373900462	chr4:152336377-152336378	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs185916285	chr4:152336404-152336405	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs191063479	chr4:152336422-152336423	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs112950861	chr4:152336425-152336426	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs113853436	chr4:152336432-152336433	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs564545092	chr4:152336451-152336452	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs532052417	chr4:152336520-152336521	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs544312714	chr4:152336521-152336522	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs9683881	chr4:152336536-152336537	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs529930207	chr4:152336544-152336545	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs529170605	chr4:152336583-152336584	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs548184909	chr4:152336609-152336610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs145496279	chr4:152336610-152336611	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs527587292	chr4:152336620-152336621	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs148844132	chr4:152336702-152336703	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs375688066	chr4:152336728-152336729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs143517294	chr4:152336743-152336744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	16272173	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Esophageal cancer	21851588	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Breast cancer	21785460	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21633010	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	17588203	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	22522925	CNVD
Intellectual disability	22102821	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1004 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152331200-152336000	Weak transcription	HUVEC	blood vessel
2	chr4:152331600-152338000	Weak transcription	Psoas Muscle	Psoas
3	chr4:152331600-152339200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr4:152331800-152336400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr4:152331800-152338000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr4:152331800-152338000	Weak transcription	Pancreas	Pancrea
7	chr4:152331800-152338400	Weak transcription	Stomach Mucosa	stomach
8	chr4:152332000-152337000	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr4:152332000-152337200	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr4:152332000-152340400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr4:152332000-152347600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr4:152332200-152336600	Weak transcription	Placenta Amnion	Placenta Amnion
13	chr4:152332200-152338000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr4:152332200-152338000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr4:152332400-152336600	Weak transcription	Hela-S3	cervix
16	chr4:152332400-152338000	Weak transcription	HUES48 Cell Line	embryonic stem cell
17	chr4:152332800-152336800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr4:152332800-152337200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr4:152333000-152336400	Weak transcription	HMEC	breast
20	chr4:152333000-152336600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr4:152333000-152337800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr4:152333200-152338200	Weak transcription	HepG2	liver
23	chr4:152333400-152336400	Weak transcription	NHEK	skin
24	chr4:152333400-152336800	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr4:152333600-152336600	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr4:152334000-152340200	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr4:152336000-152339400	Enhancers	HUVEC	blood vessel
28	chr4:152336200-152340600	Enhancers	HSMM	muscle
29	chr4:152336400-152336600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr4:152336400-152336800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
31	chr4:152336400-152336800	Enhancers	NH-A	brain
32	chr4:152336400-152337800	Enhancers	NHEK	skin
33	chr4:152336400-152338000	Enhancers	HMEC	breast
34	chr4:152336400-152340600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr4:152336600-152336800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr4:152336600-152337400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr4:152336600-152337800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
38	chr4:152336600-152338000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr4:152336600-152340000	Enhancers	Placenta Amnion	Placenta Amnion
40	chr4:152336600-152340400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
41	chr4:152336600-152340400	Enhancers	Skeletal Muscle Female	skeletal muscle
42	chr4:152336600-152340400	Enhancers	Hela-S3	cervix
43	chr4:152336600-152340600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
44	chr4:152336600-152340600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr4:152336800-152337200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr4:152336800-152337200	Flanking Active TSS	NH-A	brain
47	chr4:152336800-152337200	Enhancers	Osteobl	bone
48	chr4:152336800-152337400	Enhancers	Skeletal Muscle Male	skeletal muscle
49	chr4:152336800-152337400	Enhancers	HSMMtube	muscle
50	chr4:152336800-152337600	Enhancers	NHLF	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links