Variant report

Variant nsv433319
Chromosome Location chr19:41448734-41510030
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:264 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41442400-41451400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr19:41442600-41450200 Weak transcription Lung lung
3 chr19:41444800-41455800 Weak transcription Fetal Intestine Large intestine
4 chr19:41445400-41450200 Weak transcription Fetal Intestine Small intestine
5 chr19:41445800-41449200 Enhancers HUVEC blood vessel
6 chr19:41448200-41449600 Weak transcription Liver Liver
7 chr19:41449600-41451800 Strong transcription Liver Liver
8 chr19:41450200-41450400 Bivalent Enhancer Esophagus oesophagus
9 chr19:41450200-41450600 ZNF genes & repeats Lung lung
10 chr19:41450200-41450800 Strong transcription Fetal Intestine Small intestine
11 chr19:41450800-41451800 ZNF genes & repeats Fetal Intestine Small intestine
12 chr19:41451400-41451800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
13 chr19:41451400-41452200 Flanking Active TSS K562 blood
14 chr19:41451800-41452200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr19:41451800-41455200 Weak transcription Liver Liver
16 chr19:41451800-41456200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr19:41451800-41456200 Weak transcription Fetal Intestine Small intestine
18 chr19:41452200-41452400 Enhancers K562 blood
19 chr19:41453800-41458200 Weak transcription Right Atrium heart
20 chr19:41456200-41456400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
21 chr19:41459600-41460800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
22 chr19:41460000-41460800 ZNF genes & repeats Brain Hippocampus Middle brain
23 chr19:41460000-41461600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr19:41460200-41460400 ZNF genes & repeats A549 lung
25 chr19:41460200-41461400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
26 chr19:41464600-41464800 Enhancers Fetal Intestine Small intestine
27 chr19:41464800-41466400 Weak transcription Fetal Intestine Small intestine
28 chr19:41465200-41466600 Enhancers Esophagus oesophagus
29 chr19:41465400-41465800 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
30 chr19:41465400-41465800 Active TSS Breast Myoepithelial Primary Cells Breast
31 chr19:41465400-41466000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr19:41465800-41466000 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr19:41465800-41466000 Flanking Bivalent TSS/Enh Brain Dorsolateral Prefrontal Cortex brain
34 chr19:41465800-41466200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr19:41465800-41466200 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
36 chr19:41465800-41466200 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
37 chr19:41466000-41466200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr19:41466000-41466200 Bivalent Enhancer Adipose Nuclei Adipose
39 chr19:41466000-41466200 Bivalent Enhancer Brain Dorsolateral Prefrontal Cortex brain
40 chr19:41466200-41466600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
41 chr19:41466200-41466600 Enhancers Sigmoid Colon Sigmoid Colon
42 chr19:41466200-41466800 Enhancers Adipose Nuclei Adipose
43 chr19:41466200-41469800 Enhancers Breast Myoepithelial Primary Cells Breast
44 chr19:41466200-41469800 Enhancers Ovary ovary
45 chr19:41466400-41466600 Bivalent/Poised TSS Foreskin Melanocyte Primary Cells skin01 Skin
46 chr19:41466400-41466800 Enhancers Fetal Intestine Large intestine
47 chr19:41466400-41466800 Enhancers Fetal Intestine Small intestine
48 chr19:41466600-41468000 Weak transcription Esophagus oesophagus
49 chr19:41466800-41467000 Bivalent Enhancer Primary T cells fromperipheralblood blood
50 chr19:41466800-41467000 Bivalent Enhancer A549 lung

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