Variant report

Variant	nsv435694
Chromosome Location	chr1:113610263-113616294
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:902)
CpG islands
(count:732)
Chromatin interactive
region (count:21)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:902 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:113614699-113615830	K562	blood:	n/a	n/a
2	ARID3A	chr1:113616179-113616297	K562	blood:	n/a	n/a
3	ATF1	chr1:113614716-113615966	K562	blood:	n/a	n/a
4	ATF2	chr1:113615102-113615976	GM12878	blood:	n/a	n/a
5	ATF2	chr1:113615212-113615784	GM12878	blood:	n/a	n/a
6	ATF2	chr1:113615390-113615864	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr1:113615256-113616021	H1-hESC	embryonic stem cell:	n/a	n/a
8	ATF3	chr1:113614687-113615025	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF3	chr1:113614669-113615046	K562	blood:	n/a	n/a
10	ATF3	chr1:113615539-113615953	K562	blood:	n/a	n/a
11	ATF3	chr1:113614690-113615028	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF3	chr1:113615261-113615518	K562	blood:	n/a	n/a
13	BACH1	chr1:113615321-113616143	K562	blood:	n/a	n/a
14	BCL3	chr1:113615764-113616125	A549	lung:	n/a	n/a
15	BCLAF1	chr1:113615155-113616386	GM12878	blood:	n/a	n/a
16	BCLAF1	chr1:113615116-113616194	GM12878	blood:	n/a	n/a
17	BHLHE40	chr1:113615144-113616850	GM12878	blood:	n/a	chr1:113616692-113616701 chr1:113616692-113616701 chr1:113616691-113616700
18	BHLHE40	chr1:113615259-113616786	HepG2	liver:	n/a	chr1:113616692-113616701 chr1:113616692-113616701 chr1:113616691-113616700
19	BHLHE40	chr1:113614776-113616877	K562	blood:	n/a	chr1:113616692-113616701 chr1:113616692-113616701 chr1:113616691-113616700
20	BRCA1	chr1:113615758-113616006	GM12878	blood:	n/a	n/a
21	BRCA1	chr1:113615823-113616412	HepG2	liver:	n/a	n/a
22	BRCA1	chr1:113615040-113616226	Hela-S3	cervix:	n/a	n/a
23	CBX3	chr1:113615096-113616018	K562	blood:	n/a	n/a
24	CBX3	chr1:113614710-113616713	K562	blood:	n/a	n/a
25	CCNT2	chr1:113614736-113616365	K562	blood:	n/a	n/a
26	CEBPB	chr1:113614702-113616371	Hela-S3	cervix:	n/a	chr1:113614859-113614870 chr1:113615772-113615780
27	CEBPB	chr1:113614592-113615855	K562	blood:	n/a	chr1:113614859-113614870 chr1:113615772-113615780
28	CEBPB	chr1:113614587-113615844	K562	blood:	n/a	chr1:113614859-113614870 chr1:113615772-113615780
29	CEBPB	chr1:113614699-113615474	HepG2	liver:	n/a	chr1:113614859-113614870
30	CEBPB	chr1:113614675-113615749	H1-hESC	embryonic stem cell:	n/a	chr1:113614859-113614870
31	CEBPB	chr1:113614761-113615472	IMR90	lung:	n/a	chr1:113614859-113614870
32	CEBPB	chr1:113614733-113615981	A549	lung:	n/a	chr1:113614859-113614870 chr1:113615772-113615780
33	CEBPB	chr1:113614725-113615036	K562	blood:	n/a	chr1:113614859-113614870
34	CEBPD	chr1:113615623-113616299	HepG2	liver:	n/a	n/a
35	CEBPD	chr1:113614650-113616514	K562	blood:	n/a	n/a
36	CEBPD	chr1:113614604-113616127	K562	blood:	n/a	n/a
37	CHD1	chr1:113615872-113616298	H1-hESC	embryonic stem cell:	n/a	n/a
38	CHD1	chr1:113615205-113616715	GM12878	blood:	n/a	n/a
39	CHD2	chr1:113615112-113616389	Hela-S3	cervix:	n/a	n/a
40	CHD2	chr1:113615278-113616359	K562	blood:	n/a	n/a
41	CHD2	chr1:113615249-113615906	H1-hESC	embryonic stem cell:	n/a	n/a
42	CHD2	chr1:113615133-113616413	GM12878	blood:	n/a	n/a
43	CREB1	chr1:113615136-113616398	H1-hESC	embryonic stem cell:	n/a	n/a
44	CREB1	chr1:113615128-113616489	K562	blood:	n/a	n/a
45	CREB1	chr1:113615505-113616036	A549	lung:	n/a	n/a
46	CREB1	chr1:113615449-113616426	H1-hESC	embryonic stem cell:	n/a	n/a
47	CTBP2	chr1:113615202-113616400	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr1:113615560-113615710	Caco-2	colon:	n/a	n/a
49	CTCF	chr1:113615540-113615690	Hela-S3	cervix:	n/a	n/a
50	CTCF	chr1:113615340-113615490	WERI-Rb-1	eye:	n/a	chr1:113615386-113615399 chr1:113615383-113615401

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:113615592-113615642	HRCEpiC	kidney:	n/a
2	chr1:113616077-113616127	HNPCEpiC	eye:	n/a
3	chr1:113615633-113615683	PrEC	prostate:	n/a
4	chr1:113616077-113616127	HAEpiC	amniotic membrane:	n/a
5	chr1:113615595-113615645	SK-N-SH_RA	brain:	n/a
6	chr1:113615267-113615317	NHDF-neo	bronchial:	n/a
7	chr1:113615747-113615797	ProgFib	skin:	n/a
8	chr1:113615592-113615642	NB4	blood:	n/a
9	chr1:113615856-113615906	Jurkat	blood:	n/a
10	chr1:113615267-113615317	AG10803	skin:	n/a
11	chr1:113616077-113616127	IMR90	lung:	fetal
12	chr1:113615878-113615928	H1-hESC	embryonic stem cell:	embryo
13	chr1:113616118-113616168	ECC-1	luminal epithelium:	n/a
14	chr1:113615633-113615683	HNPCEpiC	eye:	n/a
15	chr1:113615709-113615759	Hela-S3	cervix:	n/a
16	chr1:113615595-113615645	BE2_C	brain:	n/a
17	chr1:113615136-113615186	HRE	kidney:	n/a
18	chr1:113615633-113615683	HCF	heart:	n/a
19	chr1:113616118-113616168	HIPEpiC	eye:	n/a
20	chr1:113615267-113615317	NT2-D1	testis:	n/a
21	chr1:113615595-113615645	CMK	blood:	n/a
22	chr1:113616077-113616127	T-47D	breast:	n/a
23	chr1:113615595-113615645	GM12891	blood:	n/a
24	chr1:113615595-113615645	GM06990	blood:	n/a
25	chr1:113615595-113615645	GM19239	blood:	n/a
26	chr1:113615633-113615683	Hepatocyte	liver:	n/a
27	chr1:113615709-113615759	ProgFib	skin:	n/a
28	chr1:113615878-113615928	RPTEC	kidney:	n/a
29	chr1:113615267-113615317	HL-60	blood:	n/a
30	chr1:113615136-113615186	HCM	heart:	n/a
31	chr1:113615408-113615458	NHBE	bronchial:	n/a
32	chr1:113615878-113615928	HRE	kidney:	n/a
33	chr1:113615136-113615186	K562	blood:	n/a
34	chr1:113615595-113615645	MCF-7	breast:	n/a
35	chr1:113615595-113615645	T-47D	breast:	n/a
36	chr1:113616077-113616127	Jurkat	blood:	n/a
37	chr1:113615267-113615317	HRE	kidney:	n/a
38	chr1:113615878-113615928	AoSMC	blood vessel:	n/a
39	chr1:113615878-113615928	PrEC	prostate:	n/a
40	chr1:113615878-113615928	HNPCEpiC	eye:	n/a
41	chr1:113615709-113615759	GM12891	blood:	n/a
42	chr1:113616077-113616127	HRE	kidney:	n/a
43	chr1:113616077-113616127	AG04450	lung:	fetal
44	chr1:113615856-113615906	HNPCEpiC	eye:	n/a
45	chr1:113615633-113615683	RPTEC	kidney:	n/a
46	chr1:113615709-113615759	GM06990	blood:	n/a
47	chr1:113615592-113615642	GM12892	blood:	n/a
48	chr1:113615592-113615642	ProgFib	skin:	n/a
49	chr1:113615408-113615458	NB4	blood:	n/a
50	chr1:113615878-113615928	MCF10A-Er-Src	breast:	n/a

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:113615878..113618493-chr1:113649795..113652119,3	MCF-7	breast:
2	chr1:113615667..113617631-chr6:26055280..26057308,2	MCF-7	breast:
3	chr1:113258208..113260404-chr1:113615515..113617358,3	MCF-7	breast:
4	chr1:113493791..113500715-chr1:113613796..113618010,15	K562	blood:
5	chr1:113610863..113612583-chr1:113613310..113615320,3	K562	blood:
6	chr1:113257532..113261488-chr1:113614794..113617265,4	K562	blood:
7	chr1:113608350..113611727-chr1:113613792..113617308,4	MCF-7	breast:
8	chr1:113610863..113612583-chr1:113613310..113615320,3	K562	blood:
9	chr1:113615753..113616585-chr11:62608645..62609638,3	Hela-S3	cervix:
10	chr1:113442578..113444928-chr1:113615994..113617542,2	K562	blood:
11	chr1:113495059..113500488-chr1:113613593..113618010,11	K562	blood:
12	chr1:113615839..113617741-chr1:113618615..113621229,2	K562	blood:
13	chr1:113615969..113617756-chr1:113641102..113642672,2	MCF-7	breast:
14	chr1:113615336..113615855-chr17:65821115..65821880,2	MCF-7	breast:
15	chr1:113615529..113616322-chr12:4429997..4430574,2	Hela-S3	cervix:
16	chr1:113614064..113616964-chr1:113668302..113669880,2	K562	blood:
17	chr1:113615409..113616274-chr1:113645815..113646392,2	MCF-7	breast:
18	chr1:113615524..113616364-chr13:111365226..111366116,2	Hela-S3	cervix:
19	chr1:113616013..113618025-chr1:113688637..113691001,2	MCF-7	breast:
20	chr1:113613175..113615596-chr1:113621813..113624852,3	K562	blood:
21	chr1:113608530..113612583-chr1:113612814..113618341,10	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC16A1-2	chr1:113615561-113615727	ENSG00000238198
2	lnc-SLC16A1-2	chr1:113614707-113615830	NONHSAT005314

No data

Variant related genes	Relation type
LRIG2	TF binding region
ENSG00000238198	TF binding region
LRIG2	CpG island
ENSG00000238198	CpG island
ENSG00000171634	chromatin interactions
ENSG00000198799	chromatin interactions
ENSG00000153487	chromatin interactions
ENSG00000226419	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000187837	chromatin interactions
ENSG00000155367	chromatin interactions
ENSG00000261595	chromatin interactions
ENSG00000078237	chromatin interactions
ENSG00000238198	chromatin interactions
ENSG00000237278	chromatin interactions
ENSG00000155380	chromatin interactions
ENSG00000134905	chromatin interactions

Extended variants
information (count: 196 )
Associated
traits (count: 100 )

Variant overlapped rSNPs/rCNVs (count:196 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs111785617	chr1:113610304-113610305	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs564998328	chr1:113610312-113610313	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs192147154	chr1:113610319-113610320	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs543707152	chr1:113610328-113610329	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs57372781	chr1:113610336-113610337	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs143139164	chr1:113610352-113610353	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs35045268	chr1:113610358-113610359	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs397894849	chr1:113610372-113610373	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs4025965	chr1:113610374-113610375	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs35260854	chr1:113610380-113610381	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs559295507	chr1:113610403-113610404	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs189098129	chr1:113610412-113610413	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs12117273	chr1:113610416-113610417	Weak transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs193009743	chr1:113610424-113610425	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs537247393	chr1:113610441-113610442	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs560426966	chr1:113610445-113610446	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs550455413	chr1:113610472-113610473	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs567462240	chr1:113610478-113610479	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs11311487	chr1:113610494-113610495	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs397894909	chr1:113610495-113610496	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs536515292	chr1:113610514-113610515	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs377573718	chr1:113610537-113610538	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs114118197	chr1:113610541-113610542	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs140096698	chr1:113610551-113610552	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs538669047	chr1:113610567-113610568	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs575548361	chr1:113610592-113610593	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs575205555	chr1:113610593-113610594	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs564152675	chr1:113610600-113610601	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs184574594	chr1:113610626-113610627	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs201978093	chr1:113610665-113610666	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs563698341	chr1:113610697-113610698	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs574200572	chr1:113610739-113610740	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs542892901	chr1:113610763-113610764	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs549854637	chr1:113610794-113610795	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs568135764	chr1:113610795-113610796	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs79524682	chr1:113610828-113610829	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs375363180	chr1:113610879-113610880	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs528457893	chr1:113610892-113610893	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs551409694	chr1:113610988-113610989	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs565283230	chr1:113611063-113611064	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs188021302	chr1:113611091-113611092	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs551068950	chr1:113611106-113611107	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs529119339	chr1:113611117-113611118	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs55737720	chr1:113611126-113611127	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs370484904	chr1:113611150-113611151	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs567319209	chr1:113611209-113611210	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs115522588	chr1:113611293-113611294	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs546899067	chr1:113611318-113611319	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs566810097	chr1:113611328-113611329	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs200007576	chr1:113611338-113611339	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:100)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Medulloblastoma	21979893	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21720365	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Pancreatic endocrine tumor	17639061	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Asthma	20841430	CNVD
Aetanephric adenomas	20802469	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Systemic lupus erythematosus	21956041	CNVD
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	16573809	CNVD
Glioma	17123091	CNVD
Lung cancer	16773561	CNVD
Breast cancer	17899364	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Melanoma	19671679	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:342 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:113600400-113614400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr1:113600400-113614800	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr1:113600400-113615000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr1:113602400-113615000	Weak transcription	Right Atrium	heart
5	chr1:113602600-113614800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr1:113610600-113611200	Enhancers	Fetal Intestine Large	intestine
7	chr1:113610600-113611200	Enhancers	Fetal Intestine Small	intestine
8	chr1:113610600-113611200	Enhancers	HepG2	liver
9	chr1:113610800-113611200	Enhancers	A549	lung
10	chr1:113611200-113614200	Weak transcription	Fetal Intestine Small	intestine
11	chr1:113611200-113614400	Weak transcription	Fetal Intestine Large	intestine
12	chr1:113611200-113614400	Weak transcription	HepG2	liver
13	chr1:113611200-113614800	Weak transcription	A549	lung
14	chr1:113614200-113614400	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr1:113614200-113614600	Enhancers	HUES6 Cell Line	embryonic stem cell
16	chr1:113614200-113614800	Enhancers	H1 Cell Line	embryonic stem cell
17	chr1:113614200-113614800	Enhancers	Duodenum Mucosa	Duodenum
18	chr1:113614200-113614800	Enhancers	Fetal Heart	heart
19	chr1:113614200-113614800	Enhancers	K562	blood
20	chr1:113614200-113615000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
21	chr1:113614200-113615000	Enhancers	Fetal Intestine Small	intestine
22	chr1:113614400-113614600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr1:113614400-113614600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr1:113614400-113614600	Enhancers	HUES48 Cell Line	embryonic stem cell
25	chr1:113614400-113614600	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr1:113614400-113614600	Enhancers	HepG2	liver
27	chr1:113614400-113614800	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr1:113614400-113614800	Enhancers	iPS-20b Cell Line	embryonic stem cell
29	chr1:113614400-113614800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
30	chr1:113614400-113614800	Enhancers	Liver	Liver
31	chr1:113614400-113614800	Enhancers	Dnd41	blood
32	chr1:113614400-113615000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
33	chr1:113614400-113615000	Enhancers	Fetal Intestine Large	intestine
34	chr1:113614400-113615000	Enhancers	Rectal Mucosa Donor 31	rectum
35	chr1:113614400-113615200	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
36	chr1:113614600-113614800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr1:113614600-113614800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
38	chr1:113614600-113614800	Enhancers	iPS-18 Cell Line	embryonic stem cell
39	chr1:113614600-113614800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr1:113614600-113614800	Enhancers	Primary hematopoietic stem cells short term culture	blood
41	chr1:113614600-113614800	Enhancers	Primary T regulatory cells fromperipheralblood	blood
42	chr1:113614600-113614800	Enhancers	Primary T cells effector/memory enriched fromperipheralblood	blood
43	chr1:113614600-113614800	Enhancers	Primary T killer memory cells from peripheral blood	blood
44	chr1:113614600-113614800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr1:113614600-113614800	Enhancers	Adipose Nuclei	Adipose
46	chr1:113614600-113614800	Enhancers	Brain Anterior Caudate	brain
47	chr1:113614600-113614800	Enhancers	Brain Inferior Temporal Lobe	brain
48	chr1:113614600-113614800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
49	chr1:113614600-113614800	Enhancers	Brain Substantia Nigra	brain
50	chr1:113614600-113614800	Enhancers	Fetal Brain Female	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links