Variant report
Variant | nsv441751 |
---|---|
Chromosome Location | chr2:35064073-35066670 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs558345333 | chr2:35064080-35064081 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs571827444 | chr2:35064085-35064086 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs562935364 | chr2:35064094-35064095 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs540589414 | chr2:35064115-35064116 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs560559967 | chr2:35064161-35064162 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs573947682 | chr2:35064201-35064202 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs80020444 | chr2:35064219-35064220 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs530526442 | chr2:35064223-35064224 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs563238340 | chr2:35064250-35064251 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs531797898 | chr2:35064280-35064281 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs545612050 | chr2:35064301-35064302 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs76064465 | chr2:35064309-35064310 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs527805190 | chr2:35064328-35064329 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs113969409 | chr2:35064351-35064352 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs567669651 | chr2:35064365-35064366 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs530157026 | chr2:35064366-35064367 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs549789141 | chr2:35064382-35064383 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs569960950 | chr2:35064394-35064395 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs538423975 | chr2:35064401-35064402 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs557706754 | chr2:35064404-35064405 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs371969557 | chr2:35064409-35064410 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs189713241 | chr2:35064418-35064419 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs374867379 | chr2:35064420-35064421 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs192948999 | chr2:35064431-35064432 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs141302644 | chr2:35064442-35064443 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs369247498 | chr2:35064448-35064449 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs111474522 | chr2:35064485-35064486 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs139631405 | chr2:35064493-35064494 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs556559528 | chr2:35064532-35064533 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs185200162 | chr2:35064550-35064551 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs78145011 | chr2:35064588-35064589 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs565491391 | chr2:35064620-35064621 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs527743129 | chr2:35064623-35064624 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs190525362 | chr2:35064673-35064674 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs181863689 | chr2:35064688-35064689 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs568765118 | chr2:35064698-35064699 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs550168730 | chr2:35064735-35064736 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs534775083 | chr2:35064751-35064752 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs569813495 | chr2:35064826-35064827 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs116739478 | chr2:35064840-35064841 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs145222531 | chr2:35064844-35064845 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs552794857 | chr2:35064866-35064867 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs186071339 | chr2:35064952-35064953 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs554229077 | chr2:35064990-35064991 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs147200524 | chr2:35065002-35065003 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs78722395 | chr2:35065007-35065008 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs188188829 | chr2:35065018-35065019 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs535772452 | chr2:35065020-35065021 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs576622097 | chr2:35065074-35065075 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs545689724 | chr2:35065089-35065090 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Breast cancer | 17393978 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
Breast cancer | 17603634 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Lynch syndrome | 18415027 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Diffuse large b-cell lymphoma | 18287131 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Adrenal tumor | 17535989 | CNVD |
Breast cancer | 21264507 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Medulloblastoma | 17522785 | CNVD |
Cancer | 23418310 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ependymoma | 16718352 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Prostate cancer | 18632612 | CNVD |
Bladder cancer | 21909424 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Intellectual disability | 22102821 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Autism | 22495311 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Autism | 17483303 | CNVD |
Invasive pancreatic ductal carcinoma | 16982739 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
Medulloblastoma | 20607354 | CNVD |
Leukemia | 18628472 | CNVD |
Autism | 19521722 | CNVD |
Autism | 18522746 | CNVD |
Breast cancer | 21364760 | CNVD |
Wilms tumour | 21544195 | CNVD |
Non-small cell lung cancer | 18927303 | CNVD |
Hereditary gingival fibromatosis | 19633868 | CNVD |
Breast cancer | 21785460 | CNVD |
Lung cancer | 18438408 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 21045282 | CNVD |
Prostate cancer | 21965145 | CNVD |
Breast cancer | 16397240 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21508638 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Neurocytoma | 17123091 | CNVD |
Autism | 22495309 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
small cell lung cancer | 20016488 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:35057200-35080400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |