Variant report

Variant	nsv442173
Chromosome Location	chr10:26686155-26689765
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 153 )
Associated
traits (count: 40 )

Variant overlapped rSNPs/rCNVs (count:153 , 50 per page) page: 1 2 3 4

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs539873459	chr10:26686177-26686178	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs143163610	chr10:26686192-26686193	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs184190607	chr10:26686197-26686198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs148247539	chr10:26686203-26686204	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs376665872	chr10:26686204-26686205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs548722220	chr10:26686239-26686240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs548877588	chr10:26686244-26686245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs530986200	chr10:26686249-26686250	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs551274219	chr10:26686289-26686290	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs567899445	chr10:26686377-26686378	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs117298315	chr10:26686389-26686390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs55949416	chr10:26686403-26686404	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs141242989	chr10:26686430-26686431	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs568701825	chr10:26686431-26686432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs559065265	chr10:26686438-26686439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs569088171	chr10:26686440-26686441	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs150856181	chr10:26686512-26686513	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs537703922	chr10:26686527-26686528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs138357866	chr10:26686543-26686544	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs557618460	chr10:26686544-26686545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs543454938	chr10:26686545-26686546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs574687855	chr10:26686547-26686548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs577661225	chr10:26686554-26686555	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs533916830	chr10:26686559-26686560	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs142836808	chr10:26686579-26686580	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs146076130	chr10:26686587-26686588	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140018475	chr10:26686608-26686609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs545517184	chr10:26686703-26686704	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs562211413	chr10:26686709-26686710	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11015088	chr10:26686723-26686724	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs35124793	chr10:26686762-26686763	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs544508697	chr10:26686820-26686821	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs574017174	chr10:26686914-26686915	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs186707497	chr10:26686934-26686935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs543229953	chr10:26686935-26686936	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs530367034	chr10:26686967-26686968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs547268957	chr10:26686988-26686989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs560495726	chr10:26686989-26686990	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs192066075	chr10:26686997-26686998	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs182886762	chr10:26687028-26687029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs374061460	chr10:26687035-26687036	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs552587827	chr10:26687069-26687070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs531119920	chr10:26687092-26687093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs562896886	chr10:26687096-26687097	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs115348675	chr10:26687115-26687116	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs374496124	chr10:26687118-26687119	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs550714297	chr10:26687130-26687131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs144813109	chr10:26687161-26687162	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs370894627	chr10:26687185-26687186	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs370125579	chr10:26687197-26687198	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:40)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Autism	21439084	CNVD
Maculopathy	20981449	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	21364760	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26681600-26688200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:26681600-26694200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr10:26689200-26689400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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