Variant report
Variant | nsv442410 |
---|---|
Chromosome Location | chr17:15650630-15674005 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:67)
- CpG islands (count:427)
- Chromatin interactive region (count:1)
- LncRNA region (count:13)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | CTCF | chr17:15672304-15672497 | Pancreas_OC | pancreas: | n/a | n/a |
2 | CTCF | chr17:15672282-15672486 | GM12891 | blood: | n/a | n/a |
3 | CTCF | chr17:15652603-15652660 | A549 | lung: | n/a | chr17:15652623-15652636 |
4 | CTCF | chr17:15672328-15672471 | HepG2 | liver: | n/a | n/a |
5 | CTCF | chr17:15654856-15654909 | GM13976 | blood: | n/a | n/a |
6 | CTCF | chr17:15655205-15655263 | GM13977 | blood: | n/a | n/a |
7 | CTCF | chr17:15672250-15672516 | GM12878 | blood: | n/a | n/a |
8 | CTCF | chr17:15653788-15653894 | LNCaP | prostate: | n/a | n/a |
9 | CTCF | chr17:15671235-15671316 | GM13977 | blood: | n/a | n/a |
10 | CTCF | chr17:15672060-15672210 | HAc | cerebellar: | n/a | n/a |
11 | CTCF | chr17:15672440-15672590 | HFF-Myc | foreskin: | n/a | n/a |
12 | CTCF | chr17:15672278-15672492 | MCF-7 | breast: | n/a | n/a |
13 | CTCF | chr17:15672365-15672431 | GM19239 | blood: | n/a | n/a |
14 | CTCF | chr17:15653545-15653592 | GM13976 | blood: | n/a | n/a |
15 | CTCF | chr17:15655194-15655285 | GM13976 | blood: | n/a | n/a |
16 | CTCF | chr17:15672315-15672472 | ProgFib | skin: | n/a | n/a |
17 | CTCF | chr17:15672311-15672497 | Fibrobl | skin: | n/a | n/a |
18 | CTCF | chr17:15672313-15672454 | GM19240 | blood: | n/a | n/a |
19 | CTCF | chr17:15672264-15672508 | MCF-7 | breast: | n/a | n/a |
20 | CTCF | chr17:15672266-15672501 | MCF-7 | breast: | n/a | n/a |
21 | CTCF | chr17:15672262-15672511 | MCF-7 | breast: | n/a | n/a |
22 | CTCF | chr17:15672270-15672499 | H1-hESC | embryonic stem cell: | n/a | n/a |
23 | CTCF | chr17:15672366-15672430 | K562 | blood: | n/a | n/a |
24 | CTCF | chr17:15672340-15672469 | HUVEC | blood vessel: | n/a | n/a |
25 | CTCF | chr17:15672295-15672488 | Hela-S3 | cervix: | n/a | n/a |
26 | CTCF | chr17:15672282-15672499 | GM12892 | blood: | n/a | n/a |
27 | CTCF | chr17:15672364-15672419 | Medullo | brain: | n/a | n/a |
28 | CTCF | chr17:15672290-15672483 | A549 | lung: | n/a | n/a |
29 | CTCF | chr17:15668468-15668555 | Lung_OC | lung: | n/a | n/a |
30 | CTCF | chr17:15672291-15672439 | LNCaP | prostate: | n/a | n/a |
31 | CTCF | chr17:15672330-15672420 | GM19238 | blood: | n/a | n/a |
32 | CTCF | chr17:15672364-15672436 | Spleen_OC | spleen: | n/a | n/a |
33 | CTCF | chr17:15672261-15672504 | MCF-7 | breast: | n/a | n/a |
34 | CTCF | chr17:15672282-15672486 | NHEK | skin: | n/a | n/a |
35 | CTCF | chr17:15672228-15672496 | A549 | lung: | n/a | n/a |
36 | CTCF | chr17:15672277-15672498 | Gliobla | brain: | n/a | n/a |
37 | CTCF | chr17:15672440-15672590 | SK-N-SH_RA | brain: | n/a | n/a |
38 | CTCF | chr17:15666698-15666753 | Spleen_OC | spleen: | n/a | n/a |
39 | EBF1 | chr17:15651959-15652279 | GM12878 | blood: | n/a | n/a |
40 | EBF1 | chr17:15651996-15652216 | GM12878 | blood: | n/a | n/a |
41 | ESR1 | chr17:15658091-15658495 | T-47D | breast: | n/a | chr17:15658257-15658274 chr17:15658256-15658273 |
42 | ESR1 | chr17:15658120-15658430 | T-47D | breast: | n/a | chr17:15658257-15658274 chr17:15658256-15658273 |
43 | FOXA2 | chr17:15651919-15652290 | A549 | lung: | n/a | n/a |
44 | POLR2A | chr17:15652594-15652680 | A549 | lung: | n/a | n/a |
45 | POLR2A | chr17:15659746-15660144 | Hela-S3 | cervix: | n/a | n/a |
46 | POLR2A | chr17:15672443-15672736 | SK-N-SH | brain: | n/a | n/a |
47 | POLR2A | chr17:15672399-15672805 | SK-N-SH | brain: | n/a | n/a |
48 | POLR2A | chr17:15659903-15660140 | Hela-S3 | cervix: | n/a | n/a |
49 | POLR2A | chr17:15652593-15652715 | A549 | lung: | n/a | n/a |
50 | POLR2A | chr17:15656456-15656607 | A549 | lung: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:15653096-15653146 | SK-N-MC | brain: | n/a |
2 | chr17:15653096-15653146 | Hela-S3 | cervix: | n/a |
3 | chr17:15652329-15652379 | H1-hESC | embryonic stem cell: | embryo |
4 | chr17:15653096-15653146 | Caco-2 | colon: | n/a |
5 | chr17:15652329-15652379 | Jurkat | blood: | n/a |
6 | chr17:15652715-15652765 | HCT-116 | colon: | n/a |
7 | chr17:15652715-15652765 | HCPEpiC | choroid plexus: | n/a |
8 | chr17:15653096-15653146 | SKMC | muscle: | n/a |
9 | chr17:15655637-15655687 | AG09309 | skin: | n/a |
10 | chr17:15653096-15653146 | AG09319 | gingival: | n/a |
11 | chr17:15652715-15652765 | NHDF-neo | bronchial: | n/a |
12 | chr17:15653473-15653523 | HCF | heart: | n/a |
13 | chr17:15652329-15652379 | HCM | heart: | n/a |
14 | chr17:15653473-15653523 | PANC-1 | pancreas: | n/a |
15 | chr17:15653096-15653146 | U87 | brain: | n/a |
16 | chr17:15653548-15653598 | BJ | skin: | n/a |
17 | chr17:15653548-15653598 | AoSMC | blood vessel: | n/a |
18 | chr17:15653473-15653523 | NHDF-neo | bronchial: | n/a |
19 | chr17:15653548-15653598 | ovcar-3 | ovarian: | n/a |
20 | chr17:15653473-15653523 | HMEC | breast: | n/a |
21 | chr17:15652715-15652765 | AG10803 | skin: | n/a |
22 | chr17:15652715-15652765 | BE2_C | brain: | n/a |
23 | chr17:15652329-15652379 | HAEpiC | amniotic membrane: | n/a |
24 | chr17:15655637-15655687 | Jurkat | blood: | n/a |
25 | chr17:15653473-15653523 | PrEC | prostate: | n/a |
26 | chr17:15652329-15652379 | SKMC | muscle: | n/a |
27 | chr17:15652329-15652379 | BJ | skin: | n/a |
28 | chr17:15653096-15653146 | NT2-D1 | testis: | n/a |
29 | chr17:15652854-15652904 | HEK293 | kidney: | embryo |
30 | chr17:15652329-15652379 | Hela-S3 | cervix: | n/a |
31 | chr17:15653548-15653598 | K562 | blood: | n/a |
32 | chr17:15653473-15653523 | SAEC | small airway: | n/a |
33 | chr17:15653473-15653523 | HCPEpiC | choroid plexus: | n/a |
34 | chr17:15653096-15653146 | AoSMC | blood vessel: | n/a |
35 | chr17:15652854-15652904 | HRPEpiC | eye: | n/a |
36 | chr17:15653473-15653523 | SK-N-SH | brain: | n/a |
37 | chr17:15652854-15652904 | AG09319 | gingival: | n/a |
38 | chr17:15652715-15652765 | HRPEpiC | eye: | n/a |
39 | chr17:15655637-15655687 | AG04449 | skin: | fetal |
40 | chr17:15655637-15655687 | BJ | skin: | n/a |
41 | chr17:15652715-15652765 | Hela-S3 | cervix: | n/a |
42 | chr17:15655637-15655687 | HUVEC | blood vessel: | n/a |
43 | chr17:15652854-15652904 | ovcar-3 | ovarian: | n/a |
44 | chr17:15653096-15653146 | GM12878 | blood: | n/a |
45 | chr17:15655637-15655687 | NB4 | blood: | n/a |
46 | chr17:15653548-15653598 | RPTEC | kidney: | n/a |
47 | chr17:15652854-15652904 | BJ | skin: | n/a |
48 | chr17:15653473-15653523 | HRE | kidney: | n/a |
49 | chr17:15652854-15652904 | SAEC | small airway: | n/a |
50 | chr17:15652329-15652379 | MCF10A-Er-Src | breast: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:15646677..15648283-chr17:15650856..15653224,2 | K562 | blood: |
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-TRIM16-1 | chr17:15652017-15652629 | NONHSAT145866 |
2 | lnc-TRIM16-2 | chr17:15652075-15652506 | ENSG00000233002.2 |
3 | lnc-TRIM16-7 | chr17:15664746-15664857 | NONHSAT145868 |
4 | lnc-TRIM16-6 | chr17:15661567-15661668 | NONHSAT145865 |
5 | lnc-TRIM16-3 | chr17:15664928-15665158 | ENSG00000233193 |
6 | lnc-TRIM16-6 | chr17:15661567-15661699 | ucscGeneNc_uc010cow_1 |
7 | lnc-TRIM16-7 | chr17:15663778-15664123 | NONHSAT145868 |
8 | lnc-TRIM16-1 | chr17:15666900-15669134 | NONHSAT145863 |
9 | lnc-TRIM16-6 | chr17:15660004-15660081 | ucscGeneNc_uc010cow_1 |
10 | lnc-TRIM16-6 | chr17:15650705-15650937 | NONHSAT145865 |
11 | lnc-TRIM16-6 | chr17:15660004-15660081 | NONHSAT145865 |
12 | lnc-TRIM16-3 | chr17:15666900-15667083 | ENSG00000233193 |
13 | lnc-TRIM16-6 | chr17:15650514-15650937 | ucscGeneNc_uc010cow_1 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000233002 | TF binding region |
ENSG00000267227 | TF binding region |
CDRT15P2 | TF binding region |
ENSG00000233193 | TF binding region |
ENSG00000233002 | CpG island |
ENSG00000267227 | CpG island |
CDRT15P2 | CpG island |
ENSG00000233193 | CpG island |
ENSG00000233002 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs148842499 | chr17:15650635-15650636 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs557390437 | chr17:15650649-15650650 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
3 | rs143452286 | chr17:15650704-15650705 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
4 | rs56053384 | chr17:15650728-15650729 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs75299246 | chr17:15650737-15650738 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
6 | rs55673041 | chr17:15650742-15650743 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
7 | rs371332571 | chr17:15650779-15650780 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
8 | rs547949881 | chr17:15650780-15650781 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
9 | rs369407230 | chr17:15650810-15650811 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
10 | rs569240585 | chr17:15650824-15650825 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
11 | rs536889335 | chr17:15650829-15650830 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
12 | rs556739438 | chr17:15650843-15650844 | Weak transcription | lncRNA | n/a | Overlapped CNVs | n/a |
13 | rs373341205 | chr17:15650908-15650909 | Weak transcription | Chromatin interactive regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs137942965 | chr17:15650920-15650921 | Weak transcription | Chromatin interactive regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs545706996 | chr17:15650922-15650923 | Weak transcription | Chromatin interactive regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs552818308 | chr17:15650938-15650939 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs572824575 | chr17:15650950-15650951 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs541446274 | chr17:15650951-15650952 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs561861943 | chr17:15651025-15651026 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
20 | rs11657430 | chr17:15651090-15651091 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
21 | rs184787566 | chr17:15651124-15651125 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
22 | rs529689860 | chr17:15651132-15651133 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
23 | rs530519636 | chr17:15651154-15651155 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
24 | rs72821710 | chr17:15651192-15651193 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
25 | rs11652541 | chr17:15651231-15651232 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | LD-proxies of rSNPOverlapped rCNV | mRNA abundance |
26 | rs79893156 | chr17:15651247-15651248 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
27 | rs533532556 | chr17:15651280-15651281 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
28 | rs368992634 | chr17:15651362-15651363 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
29 | rs370827783 | chr17:15651438-15651439 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
30 | rs372446492 | chr17:15651484-15651485 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
31 | rs547341891 | chr17:15651655-15651656 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs143396345 | chr17:15651674-15651675 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs541006358 | chr17:15651715-15651716 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs529326865 | chr17:15651755-15651756 | Enhancers Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs146258166 | chr17:15651769-15651770 | Enhancers Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs138917223 | chr17:15651780-15651781 | Enhancers Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs565874904 | chr17:15651796-15651797 | Enhancers Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs557794448 | chr17:15651829-15651830 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs141264529 | chr17:15651860-15651861 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs150759611 | chr17:15651863-15651864 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs553265946 | chr17:15651876-15651877 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs573045161 | chr17:15651883-15651884 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs557822350 | chr17:15651887-15651888 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs191400197 | chr17:15651904-15651905 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs555072343 | chr17:15651905-15651906 | Weak transcription | Chromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs144165489 | chr17:15651919-15651920 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs59623326 | chr17:15651933-15651934 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs374782159 | chr17:15651934-15651935 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs58699635 | chr17:15651939-15651940 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs201170427 | chr17:15651943-15651944 | Weak transcription | TF binding regionChromatin interactive region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Burkitt''s lymphoma | 18698080 | CNVD |
Breast cancer | 17603634 | CNVD |
Melanoma | 18172304 | CNVD |
Glioblastoma multiforme | 19435819 | CNVD |
Non-small cell lung cancer | 19010865 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Hepatocellular carcinoma | 18803288 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Burkitt''s lymphoma | 19759907 | CNVD |
Wilms tumour | 21544195 | CNVD |
Esophageal adenocarcinoma | 18519675 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Breast cancer | 16608533 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Chordoma | 21602918 | CNVD |
Miller-Dieker syndrome | 22283845 | CNVD |
Non-syndromic sensorineural hearing loss | 17457615 | CNVD |
Cancer | 22429812 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Follicular lymphoma | 19010834 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Paraganglioma | 21461997 | CNVD |
Pheochromocytoma | 21461997 | CNVD |
Breast cancer | 22028636 | CNVD |
Breast cancer | 20837533 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Medulloblastoma | 21292688 | CNVD |
colon cancer | 17210682 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Cancer | 16751803 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Chronic lymphocytic leukemia | 17971485 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Breast cancer | 16461572 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Breast cancer | 17133270 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Moyamoya disease | 22323933 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Cancer | 20164919 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20724749 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Acute myeloid leukemia | 17237825 | CNVD |
Colorectal cancer | 21645411 | CNVD |
HIV/AIDS | 22844521 | CNVD |
Psoriasis | 22844521 | CNVD |
Rheumatoid arthritis | 22844521 | CNVD |
Sclerosis systemic | 22844521 | CNVD |
Systemic lupus erythematosus | 22844521 | CNVD |
HIV/AIDS | 17953491 | CNVD |
HIV/AIDS | 20877625 | CNVD |
Immune disease | 21076436 | CNVD |
Rheumatoid arthritis | 17953491 | CNVD |
Type 1 diabetes | 17953491 | CNVD |
HIV/AIDS | 15637236 | CNVD |
Prostate cancer | 18632612 | CNVD |
Lung cancer | 18438408 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Autism | 22495311 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Neurofibromatosis | 18196300 | CNVD |
Adenoid cystic carcinoma | 18332873 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 21509527 | CNVD |
Pancreatic cancer | 21811587 | CNVD |
Autism | 17322880 | CNVD |
Hereditary neuropathy with liability to pressure palsy | 19521722 | CNVD |
Schizophrenia | 19571808 | CNVD |
Schizophrenia | 19955444 | CNVD |
Charcot-marie-tooth disease | 18787571 | CNVD |
Breast cancer | 20409316 | CNVD |
Autism | 18414403 | CNVD |
Breast cancer | 17001317 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Peripheral neuropathy | 21193943 | CNVD |
Schizophrenia | 20587603 | CNVD |
Schizophrenia | 22958593 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Charcot-marie-tooth disease | 16463004 | CNVD |
Osteosarcoma | 22292074 | CNVD |
Charcot | 16760730 | CNVD |
Mental retardation | 17901693 | CNVD |
ovarian endometriomas | 16273235 | CNVD |
Breast cancer | 21858162 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Breast cancer | 17142309 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Autism | 22102821 | CNVD |
Gastric cancer | 18160780 | CNVD |
Non-syndromic sensorineural hearing loss | 19212409 | CNVD |
Breast cancer | 22522925 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:15648800-15652800 | Weak transcription | Ovary | ovary |
2 | chr17:15651400-15651800 | Enhancers | Primary monocytes fromperipheralblood | blood |
3 | chr17:15651400-15651800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
4 | chr17:15652600-15653000 | Bivalent Enhancer | Monocytes-CD14+_RO01746 | blood |
5 | chr17:15652800-15653000 | Bivalent Enhancer | Foreskin Keratinocyte Primary Cells skin03 | Skin |
6 | chr17:15652800-15653000 | Flanking Active TSS | Ovary | ovary |
7 | chr17:15652800-15653000 | Flanking Active TSS | Psoas Muscle | Psoas |
8 | chr17:15652800-15653200 | Enhancers | Placenta Amnion | Placenta Amnion |
9 | chr17:15652800-15653400 | Active TSS | Right Ventricle | heart |
10 | chr17:15653000-15654000 | Active TSS | Ovary | ovary |
11 | chr17:15671800-15672000 | Enhancers | Fetal Muscle Leg | muscle |
12 | chr17:15672000-15672800 | Weak transcription | Fetal Muscle Leg | muscle |
13 | chr17:15672000-15673200 | Enhancers | Fetal Muscle Trunk | muscle |
14 | chr17:15672600-15674200 | Enhancers | Stomach Smooth Muscle | stomach |
15 | chr17:15672800-15673000 | Bivalent Enhancer | Fetal Stomach | stomach |
16 | chr17:15672800-15674000 | Enhancers | Fetal Muscle Leg | muscle |
17 | chr17:15672800-15674400 | Enhancers | Left Ventricle | heart |
18 | chr17:15672800-15674800 | Enhancers | Fetal Heart | heart |
19 | chr17:15673200-15673600 | Weak transcription | Fetal Muscle Trunk | muscle |
20 | chr17:15673600-15674000 | Enhancers | Fetal Muscle Trunk | muscle |
21 | chr17:15674000-15674200 | Enhancers | Fetal Stomach | stomach |