Variant report

Variant nsv455888
Chromosome Location chr13:52491193-52570728
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:1366 , 50 per page) page: 1 2 3 4 5 6 7 ... 28
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:52464600-52494400 Weak transcription Aorta Aorta
2 chr13:52475600-52493800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr13:52476200-52493800 Weak transcription K562 blood
4 chr13:52476400-52496600 Weak transcription Duodenum Mucosa Duodenum
5 chr13:52480200-52497200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr13:52481200-52496400 Weak transcription Stomach Smooth Muscle stomach
7 chr13:52481200-52496600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr13:52481600-52502000 Weak transcription Right Atrium heart
9 chr13:52481800-52506000 Weak transcription Ovary ovary
10 chr13:52486400-52500200 Weak transcription Fetal Kidney kidney
11 chr13:52486400-52523400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr13:52486800-52502000 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr13:52487000-52507800 Weak transcription Pancreas Pancrea
14 chr13:52487400-52496800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr13:52488000-52507800 Weak transcription Brain Anterior Caudate brain
16 chr13:52488000-52508200 Weak transcription Brain Angular Gyrus brain
17 chr13:52488000-52508200 Weak transcription Brain Hippocampus Middle brain
18 chr13:52488200-52505800 Weak transcription Brain Germinal Matrix brain
19 chr13:52488200-52508000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr13:52488200-52542200 Weak transcription Brain Cingulate Gyrus brain
21 chr13:52488400-52496600 Weak transcription Fetal Brain Female brain
22 chr13:52488400-52496800 Weak transcription Thymus Thymus
23 chr13:52488600-52496400 Weak transcription Fetal Stomach stomach
24 chr13:52489000-52494600 Weak transcription Esophagus oesophagus
25 chr13:52489000-52496800 Weak transcription Fetal Muscle Leg muscle
26 chr13:52489600-52491200 Enhancers Fetal Heart heart
27 chr13:52489600-52508400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr13:52490000-52509400 Weak transcription Rectal Mucosa Donor 29 rectum
29 chr13:52490600-52491200 Strong transcription HepG2 liver
30 chr13:52491000-52491200 ZNF genes & repeats Lung lung
31 chr13:52491000-52491800 Strong transcription Fetal Intestine Large intestine
32 chr13:52491000-52491800 Strong transcription Fetal Intestine Small intestine
33 chr13:52491000-52492400 Strong transcription Liver Liver
34 chr13:52491200-52492000 Weak transcription HepG2 liver
35 chr13:52491200-52499800 Weak transcription Fetal Heart heart
36 chr13:52491200-52500200 Weak transcription Lung lung
37 chr13:52491600-52497000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr13:52491800-52493800 Weak transcription Fetal Intestine Large intestine
39 chr13:52491800-52495000 Weak transcription Fetal Intestine Small intestine
40 chr13:52492000-52492400 Strong transcription HepG2 liver
41 chr13:52492000-52508400 Weak transcription Placenta Amnion Placenta Amnion
42 chr13:52492400-52496600 Weak transcription Liver Liver
43 chr13:52492400-52497000 Weak transcription HepG2 liver
44 chr13:52492600-52539600 Weak transcription Fetal Brain Male brain
45 chr13:52493600-52494200 Active TSS Pancreatic Islets Pancreatic Islet
46 chr13:52493800-52494200 Enhancers Fetal Intestine Large intestine
47 chr13:52493800-52495200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr13:52493800-52496000 Enhancers K562 blood
49 chr13:52493800-52496600 Enhancers Placenta Placenta
50 chr13:52494000-52494800 Enhancers Fetal Lung lung

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