Variant report

Variant nsv456062
Chromosome Location chr13:90383458-90487155
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:90375600-90389600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr13:90380400-90385200 Weak transcription Hela-S3 cervix
3 chr13:90385200-90387200 Enhancers Hela-S3 cervix
4 chr13:90387200-90402400 Weak transcription Hela-S3 cervix
5 chr13:90389800-90390600 Enhancers HUES48 Cell Line embryonic stem cell
6 chr13:90390000-90390600 Enhancers ES-I3 Cell Line embryonic stem cell
7 chr13:90390200-90390800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr13:90392200-90394600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr13:90393200-90394800 Enhancers Fetal Heart heart
10 chr13:90393400-90393800 Enhancers Fetal Muscle Leg muscle
11 chr13:90393400-90393800 Enhancers Left Ventricle heart
12 chr13:90394800-90398600 Weak transcription Fetal Heart heart
13 chr13:90398200-90401200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr13:90398400-90399200 Enhancers ES-I3 Cell Line embryonic stem cell
15 chr13:90398400-90399400 Enhancers HUES64 Cell Line embryonic stem cell
16 chr13:90398600-90399200 Enhancers HUES6 Cell Line embryonic stem cell
17 chr13:90398600-90399400 Enhancers Fetal Heart heart
18 chr13:90398800-90399200 Enhancers H9 Cell Line embryonic stem cell
19 chr13:90398800-90399200 Enhancers Cortex derived primary cultured neurospheres brain
20 chr13:90399200-90399600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr13:90399200-90400400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr13:90399400-90400600 Weak transcription Fetal Heart heart
23 chr13:90399600-90399800 Enhancers Cortex derived primary cultured neurospheres brain
24 chr13:90399800-90400800 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr13:90400600-90400800 Enhancers HUES6 Cell Line embryonic stem cell
26 chr13:90400600-90401400 Enhancers Fetal Heart heart
27 chr13:90400800-90401400 Enhancers Cortex derived primary cultured neurospheres brain
28 chr13:90401200-90401400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr13:90401200-90406200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr13:90401400-90408000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr13:90401600-90402600 Enhancers HUVEC blood vessel
32 chr13:90402000-90402800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr13:90402200-90402600 Enhancers Muscle Satellite Cultured Cells --
34 chr13:90402400-90402600 Enhancers Hela-S3 cervix
35 chr13:90402400-90402800 Active TSS Primary T helper cells PMA-I stimulated --
36 chr13:90403600-90404200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr13:90406200-90406400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr13:90406400-90406600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr13:90406600-90406800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr13:90406800-90408800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr13:90408000-90408600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr13:90408600-90415600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:90414200-90415800 Enhancers HUVEC blood vessel
44 chr13:90414800-90415800 Enhancers NH-A brain
45 chr13:90415200-90416000 Enhancers Hela-S3 cervix
46 chr13:90415600-90415800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr13:90418400-90419400 Enhancers HUES48 Cell Line embryonic stem cell
48 chr13:90419000-90419400 Enhancers iPS-18 Cell Line embryonic stem cell
49 chr13:90425200-90425600 Enhancers HUVEC blood vessel
50 chr13:90431600-90438600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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