Variant report
Variant | nsv458587 |
---|---|
Chromosome Location | chr19:43284120-43593421 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4043)
- CpG islands (count:2077)
- Chromatin interactive region (count:4)
- LncRNA region (count:47)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF3 | chr19:43335349-43336094 | A549 | lung: | n/a | n/a |
2 | ATF3 | chr19:43335307-43336092 | A549 | lung: | n/a | n/a |
3 | ATF3 | chr19:43336336-43336928 | A549 | lung: | n/a | n/a |
4 | ATF3 | chr19:43355048-43355947 | A549 | lung: | n/a | n/a |
5 | ATF3 | chr19:43336349-43336838 | A549 | lung: | n/a | n/a |
6 | ATF3 | chr19:43355412-43355889 | A549 | lung: | n/a | n/a |
7 | BATF | chr19:43552186-43552537 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
8 | BATF | chr19:43361555-43361754 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr19:43552261-43552460 | GM12878 | blood: | n/a | chr19:43552319-43552330 |
10 | BATF | chr19:43442962-43443231 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr19:43588401-43588710 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr19:43591924-43592150 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr19:43302238-43302533 | GM12878 | blood: | n/a | chr19:43302344-43302355 |
14 | BCL3 | chr19:43335242-43336126 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
15 | BCL3 | chr19:43335292-43335990 | A549 | lung: | n/a | chr19:43335602-43335611 chr19:43335603-43335612 |
16 | BCL3 | chr19:43323095-43323355 | GM12878 | blood: | n/a | n/a |
17 | BCL3 | chr19:43336972-43337663 | A549 | lung: | n/a | n/a |
18 | BCL3 | chr19:43402518-43403428 | A549 | lung: | n/a | n/a |
19 | BCL3 | chr19:43336292-43336877 | A549 | lung: | n/a | n/a |
20 | BCL3 | chr19:43354910-43356058 | A549 | lung: | n/a | n/a |
21 | BCL3 | chr19:43297507-43298116 | A549 | lung: | n/a | n/a |
22 | BCL3 | chr19:43354946-43356043 | A549 | lung: | n/a | n/a |
23 | BCL3 | chr19:43336159-43337656 | A549 | lung: | n/a | chr19:43336227-43336234 |
24 | BHLHE40 | chr19:43582147-43582203 | K562 | blood: | n/a | n/a |
25 | BHLHE40 | chr19:43427453-43427512 | GM12878 | blood: | n/a | n/a |
26 | BHLHE40 | chr19:43385480-43385517 | K562 | blood: | n/a | n/a |
27 | BHLHE40 | chr19:43355572-43355890 | A549 | lung: | n/a | n/a |
28 | BRCA1 | chr19:43525934-43526309 | Hela-S3 | cervix: | n/a | n/a |
29 | BRCA1 | chr19:43355288-43355847 | Hela-S3 | cervix: | n/a | n/a |
30 | BRCA1 | chr19:43297623-43297950 | Hela-S3 | cervix: | n/a | n/a |
31 | BRCA1 | chr19:43436723-43436914 | Hela-S3 | cervix: | n/a | n/a |
32 | CBX3 | chr19:43385431-43385838 | K562 | blood: | n/a | n/a |
33 | CBX3 | chr19:43385505-43385738 | K562 | blood: | n/a | n/a |
34 | CEBPB | chr19:43562867-43563067 | Hela-S3 | cervix: | n/a | n/a |
35 | CEBPB | chr19:43482706-43482918 | Hela-S3 | cervix: | n/a | n/a |
36 | CEBPB | chr19:43297691-43297991 | Hela-S3 | cervix: | n/a | n/a |
37 | CEBPB | chr19:43335434-43335820 | Hela-S3 | cervix: | n/a | n/a |
38 | CEBPB | chr19:43510075-43510341 | Hela-S3 | cervix: | n/a | chr19:43510191-43510202 |
39 | CEBPB | chr19:43328228-43328417 | HepG2 | liver: | n/a | chr19:43328257-43328268 |
40 | CEBPB | chr19:43500870-43501012 | IMR90 | lung: | n/a | n/a |
41 | CEBPB | chr19:43326599-43326799 | A549 | lung: | n/a | n/a |
42 | CEBPB | chr19:43402907-43403129 | Hela-S3 | cervix: | n/a | n/a |
43 | CEBPB | chr19:43496316-43496617 | A549 | lung: | n/a | n/a |
44 | CEBPB | chr19:43517268-43517468 | HepG2 | liver: | n/a | chr19:43517348-43517359 |
45 | CEBPB | chr19:43337171-43337381 | A549 | lung: | n/a | n/a |
46 | CEBPB | chr19:43345870-43346046 | IMR90 | lung: | n/a | n/a |
47 | CEBPB | chr19:43324277-43324368 | A549 | lung: | n/a | n/a |
48 | CEBPB | chr19:43564424-43564703 | Hela-S3 | cervix: | n/a | n/a |
49 | CEBPB | chr19:43582058-43582378 | Hela-S3 | cervix: | n/a | n/a |
50 | CEBPB | chr19:43525813-43526656 | Hela-S3 | cervix: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43580600-43580650 | ECC-1 | luminal epithelium: | n/a |
2 | chr19:43360229-43360279 | T-47D | breast: | n/a |
3 | chr19:43423119-43423169 | T-47D | breast: | n/a |
4 | chr19:43580600-43580650 | ECC-1 | luminal epithelium: | n/a |
5 | chr19:43360229-43360279 | T-47D | breast: | n/a |
6 | chr19:43423119-43423169 | T-47D | breast: | n/a |
7 | chr19:43361218-43361268 | HRPEpiC | eye: | n/a |
8 | chr19:43442693-43442743 | HCM | heart: | n/a |
9 | chr19:43423176-43423226 | A549 | lung: | n/a |
10 | chr19:43423119-43423169 | HCF | heart: | n/a |
11 | chr19:43569592-43569642 | HIPEpiC | eye: | n/a |
12 | chr19:43442693-43442743 | MCF10A-Er-Src | breast: | n/a |
13 | chr19:43587500-43587550 | HRCEpiC | kidney: | n/a |
14 | chr19:43530623-43530673 | HCT-116 | colon: | n/a |
15 | chr19:43528994-43529044 | Hela-S3 | cervix: | n/a |
16 | chr19:43528994-43529044 | HNPCEpiC | eye: | n/a |
17 | chr19:43423115-43423165 | IMR90 | lung: | fetal |
18 | chr19:43528994-43529044 | HRCEpiC | kidney: | n/a |
19 | chr19:43569592-43569642 | PANC-1 | pancreas: | n/a |
20 | chr19:43383986-43384036 | GM12891 | blood: | n/a |
21 | chr19:43528994-43529044 | HCM | heart: | n/a |
22 | chr19:43441294-43441344 | NT2-D1 | testis: | n/a |
23 | chr19:43531770-43531820 | HRPEpiC | eye: | n/a |
24 | chr19:43355659-43355709 | HCM | heart: | n/a |
25 | chr19:43384780-43384830 | PANC-1 | pancreas: | n/a |
26 | chr19:43423265-43423315 | H1-hESC | embryonic stem cell: | embryo |
27 | chr19:43530536-43530586 | HRCEpiC | kidney: | n/a |
28 | chr19:43423115-43423165 | AG09319 | gingival: | n/a |
29 | chr19:43383799-43383849 | NB4 | blood: | n/a |
30 | chr19:43423176-43423226 | AG09309 | skin: | n/a |
31 | chr19:43385100-43385150 | SK-N-SH_RA | brain: | n/a |
32 | chr19:43442484-43442534 | PFSK-1 | brain: | n/a |
33 | chr19:43442693-43442743 | HAEpiC | amniotic membrane: | n/a |
34 | chr19:43441294-43441344 | NHBE | bronchial: | n/a |
35 | chr19:43514144-43514194 | Caco-2 | colon: | n/a |
36 | chr19:43383405-43383455 | HRPEpiC | eye: | n/a |
37 | chr19:43514144-43514194 | ProgFib | skin: | n/a |
38 | chr19:43423265-43423315 | SK-N-SH | brain: | n/a |
39 | chr19:43423176-43423226 | HEK293 | kidney: | embryo |
40 | chr19:43383799-43383849 | MCF10A-Er-Src | breast: | n/a |
41 | chr19:43588025-43588075 | SK-N-SH | brain: | n/a |
42 | chr19:43588069-43588119 | HEEpiC | esophagus: | n/a |
43 | chr19:43383405-43383455 | BJ | skin: | n/a |
44 | chr19:43528994-43529044 | GM12878 | blood: | n/a |
45 | chr19:43531770-43531820 | HPAEpiC | pulmonary alveolar: | n/a |
46 | chr19:43383986-43384036 | SK-N-MC | brain: | n/a |
47 | chr19:43442804-43442854 | NB4 | blood: | n/a |
48 | chr19:43361218-43361268 | K562 | blood: | n/a |
49 | chr19:43530623-43530673 | HPAEpiC | pulmonary alveolar: | n/a |
50 | chr19:43384780-43384830 | NH-A | brain: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
2 | chr19:43523469..43524084-chr19:43531918..43532440,2 | MCF-7 | breast: | |
3 | chr19:43531581..43532101-chr2:1136088..1136613,2 | MCF-7 | breast: | |
4 | chr19:43297087..43297875-chr19:43423005..43423976,2 | MCF-7 | breast: |
(count:47 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-PSG8-1 | chr19:43290505-43290747 | NONHSAT066567 |
2 | lnc-PSG2-5 | chr19:43514422-43514579 | NONHSAT066577 |
3 | lnc-PSG6-3 | chr19:43372253-43372507 | NONHSAT066572 |
4 | lnc-PSG1-1 | chr19:43343520-43343530 | NONHSAT146988 |
5 | lnc-PSG6-1 | chr19:43428284-43428976 | NR_073194 |
6 | lnc-PSG6-1 | chr19:43430590-43430868 | NR_073194 |
7 | lnc-PSG11-1 | chr19:43545168-43545400 | NONHSAT066579 |
8 | lnc-PSG1-1 | chr19:43341149-43341534 | NONHSAT066571 |
9 | lnc-PSG1-1 | chr19:43359708-43359870 | NONHSAT066571 |
10 | lnc-PSG2-2 | chr19:43576503-43576781 | NONHSAT066580 |
11 | lnc-PSG1-1 | chr19:43349168-43349446 | NONHSAT066571 |
12 | lnc-PSG6-1 | chr19:43429925-43430179 | NR_073194 |
13 | lnc-PSG1-1 | chr19:43359708-43359870 | NONHSAT146988 |
14 | lnc-PSG11-1 | chr19:43540021-43540112 | NONHSAT066579 |
15 | lnc-PSG6-2 | chr19:43454299-43454539 | NONHSAT066575 |
16 | lnc-PSG2-4 | chr19:43522922-43523199 | NONHSAT066578 |
17 | lnc-PSG6-1 | chr19:43441165-43441330 | NR_073194 |
18 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT066571 |
19 | lnc-PSG6-1 | chr19:43439556-43439921 | NR_073194 |
20 | lnc-PSG2-2 | chr19:43575923-43576106 | NONHSAT066580 |
21 | lnc-PSG1-1 | chr19:43348511-43348765 | NONHSAT146988 |
22 | lnc-PSG6-1 | chr19:43428286-43428976 | NONHSAT066573 |
23 | lnc-PSG6-3 | chr19:43370618-43371302 | NONHSAT066572 |
24 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT066571 |
25 | lnc-PSG6-1 | chr19:43429925-43431729 | NONHSAT066573 |
26 | lnc-PSG2-4 | chr19:43521383-43521753 | NONHSAT066578 |
27 | lnc-PSG8-1 | chr19:43285358-43285449 | NONHSAT066567 |
28 | lnc-PSG11-1 | chr19:43544526-43544780 | NONHSAT066579 |
29 | lnc-PSG2-2 | chr19:43587104-43587197 | NONHSAT066580 |
30 | lnc-PSG6-2 | chr19:43453655-43453909 | NONHSAT066575 |
31 | lnc-PSG2-5 | chr19:43511982-43512194 | NONHSAT066576 |
32 | lnc-PSG2-5 | chr19:43514110-43514858 | NONHSAT066576 |
33 | lnc-PSG1-1 | chr19:43341149-43341602 | NONHSAT066570 |
34 | lnc-PSG1-1 | chr19:43349168-43349446 | NONHSAT146988 |
35 | lnc-PSG1-1 | chr19:43343447-43343530 | NONHSAT066571 |
36 | lnc-PSG2-1 | chr19:43585939-43586423 | NONHSAT066581 |
37 | lnc-PSG6-1 | chr19:43433594-43433872 | NR_073194 |
38 | lnc-PSG1-1 | chr19:43570669-43570753 | NONHSAT066570 |
39 | lnc-PSG8-1 | chr19:43289879-43290117 | NONHSAT066567 |
40 | lnc-PSG6-3 | chr19:43372908-43374797 | NONHSAT066572 |
41 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT066571 |
42 | lnc-PSG1-1 | chr19:43358101-43358466 | NONHSAT146988 |
43 | lnc-PSG6-1 | chr19:43440309-43440647 | NONHSAT066574 |
44 | lnc-PSG2-5 | chr19:43519268-43519426 | NONHSAT066577 |
45 | lnc-PSG1-1 | chr19:43343708-43343916 | NONHSAT146988 |
46 | lnc-PSG6-1 | chr19:43441165-43441330 | NONHSAT066574 |
47 | lnc-PSG2-1 | chr19:43586658-43586820 | NONHSAT066581 |
No data |
No data |
Variant related genes | Relation type |
---|---|
CEACAMP7 | TF binding region |
PSG8 | TF binding region |
PSG11 | TF binding region |
ENSG00000225877 | TF binding region |
PSG6 | TF binding region |
CEACAMP6 | TF binding region |
CEACAMP8 | TF binding region |
PSG1 | TF binding region |
PSG2 | TF binding region |
PSG7 | TF binding region |
PSG10P | TF binding region |
CEACAMP7 | CpG island |
PSG8 | CpG island |
PSG11 | CpG island |
ENSG00000225877 | CpG island |
PSG6 | CpG island |
CEACAMP6 | CpG island |
CEACAMP8 | CpG island |
PSG1 | CpG island |
PSG2 | CpG island |
PSG7 | CpG island |
PSG10P | CpG island |
ENSG00000170848 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs375674854 | chr19:43285367-43285368 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
2 | rs2189613 | chr19:43285368-43285369 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
3 | rs570656758 | chr19:43285395-43285396 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
4 | rs150957176 | chr19:43285397-43285398 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
5 | rs61282873 | chr19:43285412-43285413 | Inactive region | lncRNA | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
6 | rs191769789 | chr19:43285420-43285421 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
7 | rs189588161 | chr19:43285614-43285615 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs59649780 | chr19:43285634-43285635 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs145151500 | chr19:43285641-43285642 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs552289101 | chr19:43285663-43285664 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs8107421 | chr19:43285683-43285684 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
12 | rs58184548 | chr19:43285701-43285702 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs528178870 | chr19:43285702-43285703 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs59566649 | chr19:43285705-43285706 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs561861104 | chr19:43285706-43285707 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs530682251 | chr19:43285725-43285726 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs372297644 | chr19:43285741-43285742 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs59228198 | chr19:43285743-43285744 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs58789935 | chr19:43285746-43285747 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs60853763 | chr19:43285765-43285766 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs550510308 | chr19:43285776-43285777 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs149401756 | chr19:43285800-43285801 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs539371965 | chr19:43285825-43285826 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs57906339 | chr19:43285828-43285829 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs148102560 | chr19:43285836-43285837 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs367636821 | chr19:43285845-43285846 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs180781167 | chr19:43285849-43285850 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs59822567 | chr19:43285866-43285867 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
29 | rs57812832 | chr19:43285878-43285879 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
30 | rs556547534 | chr19:43285892-43285893 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs61156401 | chr19:43285893-43285894 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs112268247 | chr19:43285895-43285896 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs185852801 | chr19:43285896-43285897 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs9304611 | chr19:43285922-43285923 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
35 | rs57918366 | chr19:43285928-43285929 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs58719280 | chr19:43285943-43285944 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs558091633 | chr19:43285945-43285946 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs190430079 | chr19:43285947-43285948 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs57352490 | chr19:43285951-43285952 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs575064210 | chr19:43285959-43285960 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs58303247 | chr19:43285961-43285962 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs540604356 | chr19:43285980-43285981 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs60922243 | chr19:43285981-43285982 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs559381081 | chr19:43286000-43286001 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs59749403 | chr19:43286005-43286006 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs139010509 | chr19:43286016-43286017 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs59903312 | chr19:43286020-43286021 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs142927131 | chr19:43286022-43286023 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs147428162 | chr19:43286030-43286031 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs530533091 | chr19:43286037-43286038 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Myelodysplastic syndrome | 17634407 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Chordoma | 21602918 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Retinoblastoma | 21504564 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Cancer | 20164919 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Prostate cancer | 18632612 | CNVD |
Autism | 22495311 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Congenital nephrotic syndrome | 18421352 | CNVD |
Astrocytoma | 17934521 | CNVD |
Leukemia | 17361228 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Breast cancer | 21858162 | CNVD |
Breast cancer | 17603634 | CNVD |
Glioma | 21971842 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Oligodendroglial tumors | 17285580 | CNVD |
renal disease | 20603712 | CNVD |
Salivary gland adenoid cystic carcinoma | 17545515 | CNVD |
Breast cancer | 16608533 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Breast cancer | 21364760 | CNVD |
Invasive pancreatic ductal carcinoma | 18765526 | CNVD |
Rhabdomyosarcoma | 16790082 | CNVD |
Chordoma | 18071362 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Bladder cancer | 21909424 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Basal cell lymphoma | 19029149 | CNVD |
Breast cancer | 20409316 | CNVD |
Diffuse large b-cell lymphoma | 19029149 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Renal cell carcinoma | 18765545 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Lung cancer | 18438408 | CNVD |
Ovarian clear cell carcinoma | 19293255 | CNVD |
Astrocytoma | 22246337 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Multiple myeloma | 17550852 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21509527 | CNVD |
Cancer | 20164920 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Ependymoma | 20639864 | CNVD |
Autism | 19492091 | CNVD |
Ovarian cancer | 20800559 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 16272173 | CNVD |
Spondylocostal dysostosis | 21085971 | CNVD |
Nicotine metabolism | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Glioblastoma multiforme | 17002787 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Breast cancer | 17133270 | CNVD |
Colorectal cancer | 20459617 | CNVD |
Lung adenocarcinoma | 21935476 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Melanoma | 20877625 | CNVD |
Ovarian cancer | 21240255 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Primary Severe Spermatogenic Failure | 20378930 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr19:43285600-43286200 | Enhancers | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
2 | chr19:43286200-43286400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
3 | chr19:43297000-43299400 | ZNF genes & repeats | A549 | lung |
4 | chr19:43297200-43297400 | ZNF genes & repeats | NHDF-Ad | bronchial |
5 | chr19:43297200-43297400 | ZNF genes & repeats | NHLF | lung |
6 | chr19:43297400-43297800 | Weak transcription | NHDF-Ad | bronchial |
7 | chr19:43297400-43298000 | Enhancers | Rectal Smooth Muscle | rectum |
8 | chr19:43297400-43298400 | Weak transcription | NHLF | lung |
9 | chr19:43297600-43297800 | Enhancers | HSMMtube | muscle |
10 | chr19:43297800-43298000 | Active TSS | Brain Hippocampus Middle | brain |
11 | chr19:43297800-43298200 | Active TSS | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
12 | chr19:43297800-43298200 | Active TSS | HSMMtube | muscle |
13 | chr19:43297800-43298400 | Enhancers | HMEC | breast |
14 | chr19:43297800-43298800 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
15 | chr19:43297800-43299400 | Enhancers | Muscle Satellite Cultured Cells | -- |
16 | chr19:43297800-43299400 | Enhancers | HSMM | muscle |
17 | chr19:43297800-43299400 | Enhancers | NHDF-Ad | bronchial |
18 | chr19:43297800-43299400 | Enhancers | Osteobl | bone |
19 | chr19:43298000-43298200 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
20 | chr19:43298000-43298200 | Flanking Active TSS | Brain Hippocampus Middle | brain |
21 | chr19:43298000-43298800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
22 | chr19:43298200-43298600 | Enhancers | Brain Hippocampus Middle | brain |
23 | chr19:43298200-43298800 | Enhancers | HSMMtube | muscle |
24 | chr19:43298200-43299600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
25 | chr19:43298200-43303800 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
26 | chr19:43298400-43299400 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
27 | chr19:43298400-43299400 | Enhancers | NHLF | lung |
28 | chr19:43298400-43299600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
29 | chr19:43299400-43303800 | Weak transcription | NHDF-Ad | bronchial |
30 | chr19:43299400-43303800 | Weak transcription | NHLF | lung |
31 | chr19:43301600-43303800 | Weak transcription | A549 | lung |
32 | chr19:43303800-43304200 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
33 | chr19:43303800-43304200 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
34 | chr19:43303800-43304200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
35 | chr19:43303800-43304200 | Enhancers | NHDF-Ad | bronchial |
36 | chr19:43303800-43304200 | Enhancers | NHLF | lung |
37 | chr19:43303800-43304600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
38 | chr19:43303800-43304600 | Enhancers | A549 | lung |
39 | chr19:43303800-43304600 | Enhancers | NHEK | skin |
40 | chr19:43303800-43304800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
41 | chr19:43317000-43317600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
42 | chr19:43317400-43317600 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
43 | chr19:43317600-43321400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
44 | chr19:43320600-43321200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
45 | chr19:43321000-43321400 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
46 | chr19:43321000-43321400 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
47 | chr19:43321000-43321400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
48 | chr19:43321000-43321400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
49 | chr19:43321000-43321400 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
50 | chr19:43321000-43321400 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |