Variant report

Variant	nsv458890
Chromosome Location	chr20:14758111-15017240
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2376)
CpG islands
(count:61)
Chromatin interactive
region (count:52)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2376 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:14859363-14860384	HepG2	liver:	n/a	n/a
2	ARID3A	chr20:14965101-14967567	HepG2	liver:	n/a	n/a
3	ARID3A	chr20:14986003-14986310	HepG2	liver:	n/a	n/a
4	ARID3A	chr20:14971646-14973208	HepG2	liver:	n/a	n/a
5	ARID3A	chr20:14936639-14937073	HepG2	liver:	n/a	n/a
6	ARID3A	chr20:14959886-14961038	HepG2	liver:	n/a	n/a
7	ATF2	chr20:14810438-14811025	GM12878	blood:	n/a	n/a
8	ATF2	chr20:14883084-14883368	GM12878	blood:	n/a	n/a
9	ATF2	chr20:14810438-14810958	GM12878	blood:	n/a	n/a
10	ATF2	chr20:14813148-14813759	GM12878	blood:	n/a	n/a
11	ATF2	chr20:14811032-14811585	GM12878	blood:	n/a	n/a
12	ATF2	chr20:14841040-14841554	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr20:14819159-14819726	GM12878	blood:	n/a	n/a
14	ATF2	chr20:14841032-14841474	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr20:14819109-14819739	GM12878	blood:	n/a	n/a
16	ATF2	chr20:14813151-14813770	GM12878	blood:	n/a	n/a
17	ATF2	chr20:14811110-14811561	GM12878	blood:	n/a	n/a
18	ATF3	chr20:14826094-14826569	A549	lung:	n/a	n/a
19	ATF3	chr20:14966529-14967363	A549	lung:	n/a	n/a
20	ATF3	chr20:14965454-14966225	A549	lung:	n/a	n/a
21	ATF3	chr20:14966508-14967301	A549	lung:	n/a	n/a
22	ATF3	chr20:14859536-14860398	A549	lung:	n/a	n/a
23	ATF3	chr20:14859595-14860443	A549	lung:	n/a	n/a
24	BACH1	chr20:14841074-14841466	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr20:14952997-14953174	H1-hESC	embryonic stem cell:	n/a	n/a
26	BATF	chr20:14811171-14811517	GM12878	blood:	n/a	n/a
27	BATF	chr20:14811158-14811471	GM12878	blood:	n/a	n/a
28	BATF	chr20:14813314-14813717	GM12878	blood:	n/a	n/a
29	BATF	chr20:14813339-14813704	GM12878	blood:	n/a	n/a
30	BATF	chr20:14860106-14860399	GM12878	blood:	n/a	chr20:14860263-14860273 chr20:14860262-14860273 chr20:14860267-14860277
31	BATF	chr20:14931782-14932075	GM12878	blood:	n/a	n/a
32	BATF	chr20:14810566-14810958	GM12878	blood:	n/a	n/a
33	BATF	chr20:14860056-14860418	GM12878	blood:	n/a	chr20:14860263-14860273 chr20:14860262-14860273 chr20:14860267-14860277
34	BATF	chr20:14883072-14883470	GM12878	blood:	n/a	n/a
35	BATF	chr20:14819170-14819805	GM12878	blood:	n/a	chr20:14819441-14819452
36	BATF	chr20:14826296-14826501	GM12878	blood:	n/a	chr20:14826450-14826460
37	BATF	chr20:14833838-14834046	GM12878	blood:	n/a	n/a
38	BATF	chr20:14810508-14810959	GM12878	blood:	n/a	n/a
39	BATF	chr20:14782350-14782619	GM12878	blood:	n/a	chr20:14782584-14782592
40	BATF	chr20:14883118-14883412	GM12878	blood:	n/a	n/a
41	BATF	chr20:14819247-14819774	GM12878	blood:	n/a	chr20:14819441-14819452
42	BCL11A	chr20:14859536-14859807	GM12878	blood:	n/a	n/a
43	BCL11A	chr20:14883096-14883392	GM12878	blood:	n/a	chr20:14883229-14883238
44	BCL11A	chr20:14810584-14810953	GM12878	blood:	n/a	chr20:14810705-14810714
45	BCL11A	chr20:14833756-14834084	GM12878	blood:	n/a	n/a
46	BCL11A	chr20:14819269-14819704	GM12878	blood:	n/a	chr20:14819415-14819424
47	BCL11A	chr20:14883093-14883400	GM12878	blood:	n/a	chr20:14883229-14883238
48	BCL11A	chr20:14810529-14810966	GM12878	blood:	n/a	chr20:14810705-14810714
49	BCL11A	chr20:14811187-14811493	GM12878	blood:	n/a	n/a
50	BCL11A	chr20:14813340-14813684	GM12878	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:14904432-14904482	ovcar-3	ovarian:	n/a
2	chr20:14904432-14904482	AoSMC	blood vessel:	n/a
3	chr20:14904432-14904482	AG09319	gingival:	n/a
4	chr20:14904432-14904482	SK-N-MC	brain:	n/a
5	chr20:14904432-14904482	PFSK-1	brain:	n/a
6	chr20:14904432-14904482	HepG2	liver:	n/a
7	chr20:14904432-14904482	SK-N-SH_RA	brain:	n/a
8	chr20:14904432-14904482	H1-hESC	embryonic stem cell:	embryo
9	chr20:14904432-14904482	LNCaP	prostate:	n/a
10	chr20:14904432-14904482	AG10803	skin:	n/a
11	chr20:14904432-14904482	HEK293	kidney:	embryo
12	chr20:14904432-14904482	HCPEpiC	choroid plexus:	n/a
13	chr20:14904432-14904482	Hela-S3	cervix:	n/a
14	chr20:14904432-14904482	HCF	heart:	n/a
15	chr20:14904432-14904482	MCF-7	breast:	n/a
16	chr20:14904432-14904482	U87	brain:	n/a
17	chr20:14904432-14904482	RPTEC	kidney:	n/a
18	chr20:14904432-14904482	BJ	skin:	n/a
19	chr20:14904432-14904482	HRPEpiC	eye:	n/a
20	chr20:14904432-14904482	AG04450	lung:	fetal
21	chr20:14904432-14904482	HCT-116	colon:	n/a
22	chr20:14904432-14904482	NB4	blood:	n/a
23	chr20:14904432-14904482	GM12891	blood:	n/a
24	chr20:14904432-14904482	HMEC	breast:	n/a
25	chr20:14904432-14904482	GM06990	blood:	n/a
26	chr20:14904432-14904482	CMK	blood:	n/a
27	chr20:14904432-14904482	AG04449	skin:	fetal
28	chr20:14904432-14904482	PANC-1	pancreas:	n/a
29	chr20:14904432-14904482	SKMC	muscle:	n/a
30	chr20:14904432-14904482	ECC-1	luminal epithelium:	n/a
31	chr20:14904432-14904482	HNPCEpiC	eye:	n/a
32	chr20:14904432-14904482	IMR90	lung:	fetal
33	chr20:14904432-14904482	HL-60	blood:	n/a
34	chr20:14904432-14904482	SK-N-SH	brain:	n/a
35	chr20:14904432-14904482	HPAEpiC	pulmonary alveolar:	n/a
36	chr20:14904432-14904482	Jurkat	blood:	n/a
37	chr20:14904432-14904482	BE2_C	brain:	n/a
38	chr20:14904432-14904482	HRCEpiC	kidney:	n/a
39	chr20:14904432-14904482	A549	lung:	n/a
40	chr20:14904432-14904482	NHBE	bronchial:	n/a
41	chr20:14904432-14904482	GM12878	blood:	n/a
42	chr20:14904432-14904482	AG09309	skin:	n/a
43	chr20:14904432-14904482	HRE	kidney:	n/a
44	chr20:14904432-14904482	NHDF-neo	bronchial:	n/a
45	chr20:14904432-14904482	SAEC	small airway:	n/a
46	chr20:14904432-14904482	HIPEpiC	eye:	n/a
47	chr20:14904432-14904482	GM19239	blood:	n/a
48	chr20:14904432-14904482	GM12892	blood:	n/a
49	chr20:14904432-14904482	MCF10A-Er-Src	breast:	n/a
50	chr20:14904432-14904482	K562	blood:	n/a

(count:52 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr20:14825814..14826804-chr20:14859521..14860363,2	MCF-7	breast:
2	chr20:14767717..14771762-chr20:14774616..14777473,4	MCF-7	breast:
3	chr20:14819967..14822472-chr20:14824610..14827210,3	MCF-7	breast:
4	chr20:14755716..14758614-chr20:14760211..14762111,2	MCF-7	breast:
5	chr20:14845184..14847390-chr20:14926741..14929314,2	MCF-7	breast:
6	chr20:14983136..14983867-chr7:139874694..139875444,2	MCF-7	breast:
7	chr20:14822570..14824766-chr20:14826157..14827975,2	MCF-7	breast:
8	chr20:14819830..14820468-chr4:11534089..11534643,2	MCF-7	breast:
9	chr20:14803482..14806391-chr20:14809700..14811931,2	MCF-7	breast:
10	chr20:14859239..14863091-chr20:15040405..15044044,4	MCF-7	breast:
11	chr20:14925222..14927929-chr20:14930721..14932848,2	MCF-7	breast:
12	chr20:14803482..14806391-chr20:14809700..14811931,2	MCF-7	breast:
13	chr20:14892181..14894488-chr20:14900218..14901785,2	MCF-7	breast:
14	chr20:14755716..14758614-chr20:14760211..14762111,2	MCF-7	breast:
15	chr20:14767717..14771762-chr20:14774616..14777473,4	MCF-7	breast:
16	chr20:14925222..14927929-chr20:14930721..14932848,2	MCF-7	breast:
17	chr20:14898344..14901833-chr20:14901900..14905742,3	MCF-7	breast:
18	chr20:14314384..14315320-chr20:14929469..14930347,2	MCF-7	breast:
19	chr20:14824570..14828041-chr20:14829297..14833669,5	MCF-7	breast:
20	chr20:14769951..14772584-chr20:14781634..14783463,2	MCF-7	breast:
21	chr20:14862084..14865220-chr20:14867174..14871364,3	MCF-7	breast:
22	chr20:14835355..14837300-chr20:14840386..14842306,2	MCF-7	breast:
23	chr20:14861831..14864729-chr20:14900336..14902240,2	MCF-7	breast:
24	chr20:14824570..14828041-chr20:14829297..14833669,5	MCF-7	breast:
25	chr20:14867933..14870632-chr20:14873919..14875816,2	MCF-7	breast:
26	chr20:14895407..14897578-chr20:14900614..14902594,2	MCF-7	breast:
27	chr20:14905161..14907169-chr20:14915982..14918854,2	MCF-7	breast:
28	chr20:14822570..14824766-chr20:14826157..14827975,2	MCF-7	breast:
29	chr20:14901786..14904742-chr20:14908050..14909865,2	MCF-7	breast:
30	chr20:14837652..14840600-chr20:14844675..14847639,2	MCF-7	breast:
31	chr20:14838738..14840500-chr20:14846618..14848612,2	MCF-7	breast:
32	chr20:14837652..14840600-chr20:14844675..14847639,2	MCF-7	breast:
33	chr20:14825814..14826804-chr20:14859521..14860363,2	MCF-7	breast:
34	chr20:14757945..14761170-chr20:14762279..14765371,3	MCF-7	breast:
35	chr20:14901786..14904742-chr20:14908050..14909865,2	MCF-7	breast:
36	chr20:14867933..14870632-chr20:14873919..14875816,2	MCF-7	breast:
37	chr20:14857662..14859546-chr20:15214980..15217486,2	MCF-7	breast:
38	chr20:14769951..14772584-chr20:14781634..14783463,2	MCF-7	breast:
39	chr20:14856302..14859235-chr20:14930877..14933226,2	MCF-7	breast:
40	chr20:14892181..14894488-chr20:14900218..14901785,2	MCF-7	breast:
41	chr20:14913183..14915031-chr20:14915260..14917096,2	MCF-7	breast:
42	chr20:14819967..14822472-chr20:14824610..14827210,3	MCF-7	breast:
43	chr20:14862084..14865220-chr20:14867174..14871364,3	MCF-7	breast:
44	chr20:14898344..14901833-chr20:14901900..14905742,3	MCF-7	breast:
45	chr20:14845184..14847390-chr20:14926741..14929314,2	MCF-7	breast:
46	chr20:14757945..14761170-chr20:14762279..14765371,3	MCF-7	breast:
47	chr20:14895407..14897578-chr20:14900614..14902594,2	MCF-7	breast:
48	chr20:14861831..14864729-chr20:14900336..14902240,2	MCF-7	breast:
49	chr20:14838738..14840500-chr20:14846618..14848612,2	MCF-7	breast:
50	chr20:14050662..14052329-chr20:14946506..14948938,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-FLRT3-1	chr20:14864899-14865240	NR_037841
2	lnc-C20orf7-3	chr20:14830550-14831152	NONHSAT078716
3	lnc-FLRT3-2	chr20:14915884-14916009	ENSG00000237832.1
4	lnc-FLRT3-1	chr20:14868742-14868950	ENSG00000235914.1
5	lnc-FLRT3-4	chr20:14816742-14816950	ucscGeneNc_uc002woy_1
6	lnc-FLRT3-2	chr20:14914489-14914588	ENSG00000237832.1
7	lnc-C20orf7-3	chr20:14830550-14830649	NONHSAT078714
8	lnc-FLRT3-1	chr20:14864896-14865240	NONHSAT078721
9	lnc-FLRT3-1	chr20:14864898-14865240	NONHSAT078722
10	lnc-FLRT3-2	chr20:14915576-14915720	ENSG00000237832.1
11	lnc-FLRT3-1	chr20:14885587-14886675	ENSG00000235914.1
12	lnc-FLRT3-1	chr20:14910021-14910164	NR_110318
13	lnc-FLRT3-1	chr20:14910021-14910164	NR_072988
14	lnc-FLRT3-1	chr20:14910021-14910161	ENSG00000235914.1
15	lnc-FLRT3-4	chr20:14858021-14858161	ucscGeneNc_uc002woy_1
16	lnc-FLRT3-1	chr20:14910021-14910154	NONHSAT078722
17	lnc-FLRT3-1	chr20:14864899-14865240	NR_110318
18	lnc-FLRT3-4	chr20:14812896-14813240	ucscGeneNc_uc002woy_1
19	lnc-FLRT3-1	chr20:14868742-14868950	NONHSAT078721
20	lnc-FLRT3-1	chr20:14910021-14910164	NR_037841
21	lnc-FLRT3-1	chr20:14868742-14868950	NR_037841
22	lnc-FLRT3-1	chr20:14864899-14865240	ENSG00000235914.1
23	lnc-C20orf7-3	chr20:14868789-14869314	NONHSAT078714
24	lnc-FLRT3-1	chr20:14910021-14910132	ENSG00000235914.1
25	lnc-FLRT3-1	chr20:14910021-14910142	NONHSAT078721
26	lnc-FLRT3-1	chr20:14885587-14886675	NR_072988

No data

Variant related genes	Relation type
ENSG00000237832	TF binding region
RNU6-1159P	TF binding region
RNU6-115P	TF binding region
MACROD2-AS1	TF binding region
ENSG00000237832	CpG island
RNU6-1159P	CpG island
RNU6-115P	CpG island
MACROD2-AS1	CpG island
ENSG00000237832	chromatin interactions

Extended variants
information (count: 8313 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:8313 , 50 per page) page: 1 2 3 4 5 6 7 ... 167

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1040740	chr20:14758111-14758112	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs376511918	chr20:14758118-14758119	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs147077545	chr20:14758138-14758139	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs573223787	chr20:14758162-14758163	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs386812726	chr20:14758188-14758189	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs540483351	chr20:14758219-14758220	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs560535816	chr20:14758262-14758263	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs6105322	chr20:14758284-14758285	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs186420311	chr20:14758303-14758304	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs544356752	chr20:14758309-14758310	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs370116996	chr20:14758346-14758347	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs190787001	chr20:14758350-14758351	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs575012435	chr20:14758355-14758356	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs116877157	chr20:14758363-14758364	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs141081810	chr20:14758441-14758442	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs6131607	chr20:14758473-14758474	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs546623572	chr20:14758478-14758479	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs564934093	chr20:14758492-14758493	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs181541576	chr20:14758536-14758537	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs550498174	chr20:14758602-14758603	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs577022856	chr20:14758639-14758640	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs150196636	chr20:14758653-14758654	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs548428455	chr20:14758657-14758658	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs566673220	chr20:14758667-14758668	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs562586301	chr20:14758728-14758729	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs60463547	chr20:14758758-14758759	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs73264642	chr20:14758796-14758797	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs367705630	chr20:14758803-14758804	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs576923998	chr20:14758820-14758821	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs371577091	chr20:14758838-14758839	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs79233953	chr20:14758909-14758910	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs186473404	chr20:14758917-14758918	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs374814569	chr20:14758921-14758922	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs141295430	chr20:14758928-14758929	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs574944158	chr20:14758943-14758944	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs548213357	chr20:14758949-14758950	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs560791800	chr20:14759026-14759027	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs6110427	chr20:14759027-14759028	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs6105323	chr20:14759046-14759047	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs564919533	chr20:14759051-14759052	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs191501713	chr20:14759054-14759055	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs550684359	chr20:14759099-14759100	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs149343885	chr20:14759166-14759167	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs2180477	chr20:14759169-14759170	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs545085066	chr20:14759170-14759171	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs73264643	chr20:14759193-14759194	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs370110779	chr20:14759209-14759210	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs372759542	chr20:14759228-14759229	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs527618885	chr20:14759249-14759250	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs552132939	chr20:14759251-14759252	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Breast cancer	16397240	CNVD
abortions and stillbirths	19751515	CNVD
Wilms tumour	21544195	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	16272173	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Glaucoma	21310917	CNVD
Alagille syndrome	22470819	CNVD
Lung cancer	16773561	CNVD
Renal cell carcinoma	18765545	CNVD
Alagille syndrome	17576883	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
Prostate cancer	18632612	CNVD
Ewing''s sarcoma	18628472	CNVD
Glioblastoma multiforme	18628472	CNVD
Leukemia	18628472	CNVD
Myelofibrosis	22110671	CNVD
Kabuki syndrome	21720541	CNVD
Glioblastoma multiforme	22286061	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Neurocytoma	17123091	CNVD
Glioblastoma multiforme	21138945	CNVD
Cancer	20164919	CNVD
Multiple sclerosis	20663923	CNVD
Schizophrenia	20663923	CNVD
brain infarct	20663923	CNVD
Breast cancer	22522925	CNVD
Breast cancer	17142309	CNVD
Cancer	20164920	CNVD
Schizophrenia	23813976	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Autism	20531469	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	20967226	CNVD
Williams Syndrome	20824207	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
early-passage human iPS cells	21368824	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Congenital anomalies of the kidney and urinary tract	18316590	CNVD
Cancer	21272361	CNVD
Schizophrenia	19805367	CNVD

Chromatin state (count:1274 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:14756000-14759200	Enhancers	Muscle Satellite Cultured Cells	--
2	chr20:14757000-14758200	Weak transcription	HMEC	breast
3	chr20:14757600-14759000	Enhancers	NHEK	skin
4	chr20:14757600-14759600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr20:14758000-14758600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr20:14758000-14758800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr20:14758000-14759200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr20:14758200-14758800	Enhancers	HMEC	breast
9	chr20:14758600-14758800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr20:14758600-14759400	Enhancers	NHDF-Ad	bronchial
11	chr20:14758600-14761200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr20:14759200-14760800	Weak transcription	Muscle Satellite Cultured Cells	--
13	chr20:14759200-14760800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr20:14760600-14761600	Enhancers	HUVEC	blood vessel
15	chr20:14760800-14761800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr20:14760800-14762200	Enhancers	Muscle Satellite Cultured Cells	--
17	chr20:14761200-14761800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr20:14763200-14763800	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr20:14763200-14764000	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr20:14763400-14763800	Enhancers	HUES6 Cell Line	embryonic stem cell
21	chr20:14763400-14764200	Enhancers	HUES64 Cell Line	embryonic stem cell
22	chr20:14764200-14764800	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr20:14764800-14765000	Enhancers	HUES64 Cell Line	embryonic stem cell
24	chr20:14764800-14765200	Enhancers	Fetal Lung	lung
25	chr20:14765200-14765600	Weak transcription	Fetal Lung	lung
26	chr20:14765600-14766000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
27	chr20:14765600-14766200	Enhancers	Fetal Lung	lung
28	chr20:14765600-14766400	Enhancers	Stomach Mucosa	stomach
29	chr20:14765800-14766000	Enhancers	Fetal Intestine Small	intestine
30	chr20:14765800-14766400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr20:14766000-14767400	Weak transcription	Fetal Intestine Small	intestine
32	chr20:14767400-14768200	Enhancers	Fetal Intestine Small	intestine
33	chr20:14767400-14768600	Enhancers	Fetal Intestine Large	intestine
34	chr20:14768200-14768800	Weak transcription	Fetal Intestine Small	intestine
35	chr20:14768600-14770400	Weak transcription	Fetal Intestine Large	intestine
36	chr20:14768800-14769000	Enhancers	Fetal Intestine Small	intestine
37	chr20:14769000-14771000	Weak transcription	Fetal Intestine Small	intestine
38	chr20:14770400-14772400	Enhancers	Fetal Intestine Large	intestine
39	chr20:14770600-14773000	Weak transcription	Pancreatic Islets	Pancreatic Islet
40	chr20:14771000-14771800	Enhancers	Small Intestine	intestine
41	chr20:14771000-14772400	Enhancers	Fetal Intestine Small	intestine
42	chr20:14771400-14772200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
43	chr20:14771400-14772200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
44	chr20:14771800-14773000	Weak transcription	Small Intestine	intestine
45	chr20:14772400-14772800	Weak transcription	Fetal Intestine Large	intestine
46	chr20:14772400-14772800	Weak transcription	Fetal Intestine Small	intestine
47	chr20:14772800-14774200	Enhancers	Fetal Intestine Small	intestine
48	chr20:14772800-14774400	Enhancers	Fetal Intestine Large	intestine
49	chr20:14773000-14773400	Enhancers	Pancreatic Islets	Pancreatic Islet
50	chr20:14773200-14773400	Enhancers	Small Intestine	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links