Variant report

Variant	nsv459260
Chromosome Location	chr21:41000353-41028197
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CEBPB	chr21:41015181-41015396	H1-hESC	embryonic stem cell:	n/a	n/a
2	CEBPB	chr21:41005506-41005963	A549	lung:	n/a	chr21:41005642-41005655 chr21:41005642-41005653
3	CEBPB	chr21:41019500-41020194	IMR90	lung:	n/a	chr21:41019841-41019852 chr21:41019998-41020007 chr21:41019997-41020008 chr21:41019996-41020007
4	CEBPB	chr21:41005405-41006060	A549	lung:	n/a	chr21:41005642-41005655 chr21:41005642-41005653
5	CEBPB	chr21:41005021-41006065	IMR90	lung:	n/a	chr21:41005642-41005655 chr21:41005642-41005653
6	CEBPB	chr21:41019853-41020071	K562	blood:	n/a	chr21:41019998-41020007 chr21:41019997-41020008 chr21:41019996-41020007
7	CEBPB	chr21:41004834-41005532	HCT-116	colon:	n/a	n/a
8	CEBPB	chr21:41019841-41020145	HepG2	liver:	n/a	chr21:41019841-41019852 chr21:41019998-41020007 chr21:41019997-41020008 chr21:41019996-41020007
9	CEBPB	chr21:41004806-41006208	HCT-116	colon:	n/a	chr21:41005642-41005655 chr21:41005642-41005653
10	CEBPB	chr21:41005589-41005851	A549	lung:	n/a	chr21:41005642-41005655 chr21:41005642-41005653
11	CTBP2	chr21:41009052-41010028	H1-hESC	embryonic stem cell:	n/a	n/a
12	CTCF	chr21:41010760-41010910	HepG2	liver:	n/a	n/a
13	CTCF	chr21:41002847-41003073	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
14	CTCF	chr21:41002650-41003243	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960 chr21:41002708-41002716
15	CTCF	chr21:41002920-41003070	RPTEC	kidney:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
16	CTCF	chr21:41025560-41025710	MCF-7	breast:	n/a	n/a
17	CTCF	chr21:41002840-41002990	WERI-Rb-1	eye:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
18	CTCF	chr21:41002878-41003057	LNCaP	prostate:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
19	CTCF	chr21:41002862-41003055	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
20	CTCF	chr21:41002806-41003005	A549	lung:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
21	CTCF	chr21:41002880-41003030	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
22	CTCF	chr21:41002926-41002998	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
23	CTCF	chr21:41002840-41002990	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
24	CTCF	chr21:41002907-41002997	Gliobla	brain:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
25	CTCF	chr21:41010760-41010910	MCF-7	breast:	n/a	n/a
26	CTCF	chr21:41002840-41002990	HRE	kidney:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
27	CTCF	chr21:41002880-41003030	RPTEC	kidney:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
28	CTCF	chr21:41002924-41002975	Hela-S3	cervix:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
29	CTCF	chr21:41011940-41012090	K562	blood:	n/a	n/a
30	CTCF	chr21:41002780-41002930	HRPEpiC	eye:	n/a	n/a
31	CTCF	chr21:41002900-41003050	HEK293	kidney:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
32	CTCF	chr21:41002820-41002970	HRPEpiC	eye:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
33	CTCF	chr21:41002881-41003062	LNCaP	prostate:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
34	CTCF	chr21:41002880-41003008	Medullo	brain:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
35	CTCF	chr21:41002660-41003222	MCF-7	breast:	n/a	chr21:41002938-41002959 chr21:41002944-41002960 chr21:41002708-41002716
36	CTCF	chr21:41002840-41002990	NHDF-neo	bronchial:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
37	CTCF	chr21:41002881-41003095	K562	blood:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
38	CTCF	chr21:41002896-41002999	Pancreas_OC	pancreas:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
39	CTCF	chr21:41009420-41009570	HepG2	liver:	n/a	n/a
40	CTCF	chr21:41006260-41006410	Caco-2	colon:	n/a	n/a
41	CTCF	chr21:41002820-41002970	HA-sp	spinal cord:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
42	CTCF	chr21:41002908-41003051	GM12878	blood:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
43	CTCF	chr21:41002900-41003050	AG04449	skin:	n/a	chr21:41002938-41002959 chr21:41002944-41002960
44	CTCF	chr21:41002940-41003090	HFF-Myc	foreskin:	n/a	chr21:41002944-41002960
45	CTCF	chr21:41012240-41012390	AG09309	skin:	n/a	n/a
46	EP300	chr21:41004951-41006474	SK-N-SH	brain:	n/a	chr21:41005188-41005197
47	EP300	chr21:41001946-41002509	SK-N-SH	brain:	n/a	n/a
48	EP300	chr21:41023430-41023580	GM12878	blood:	n/a	n/a
49	EP300	chr21:41005421-41006107	A549	lung:	n/a	n/a
50	EP300	chr21:41005360-41006136	A549	lung:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr21:41028116-41028166	GM06990	blood:	n/a
2	chr21:41027960-41028010	Caco-2	colon:	n/a
3	chr21:41028116-41028166	H1-hESC	embryonic stem cell:	embryo
4	chr21:41028116-41028166	BJ	skin:	n/a
5	chr21:41028116-41028166	HCT-116	colon:	n/a
6	chr21:41028116-41028166	ovcar-3	ovarian:	n/a
7	chr21:41027785-41027835	U87	brain:	n/a
8	chr21:41028116-41028166	GM12892	blood:	n/a
9	chr21:41027785-41027835	HCPEpiC	choroid plexus:	n/a
10	chr21:41027960-41028010	GM12878	blood:	n/a
11	chr21:41027785-41027835	SAEC	small airway:	n/a
12	chr21:41027960-41028010	HRE	kidney:	n/a
13	chr21:41028116-41028166	MCF10A-Er-Src	breast:	n/a
14	chr21:41027960-41028010	GM12892	blood:	n/a
15	chr21:41028116-41028166	SK-N-SH_RA	brain:	n/a
16	chr21:41027960-41028010	GM12891	blood:	n/a
17	chr21:41028116-41028166	A549	lung:	n/a
18	chr21:41027785-41027835	HL-60	blood:	n/a
19	chr21:41028116-41028166	AG09319	gingival:	n/a
20	chr21:41027785-41027835	HUVEC	blood vessel:	n/a
21	chr21:41028116-41028166	Caco-2	colon:	n/a
22	chr21:41027785-41027835	AG04449	skin:	fetal
23	chr21:41027785-41027835	HCM	heart:	n/a
24	chr21:41028116-41028166	AG10803	skin:	n/a
25	chr21:41028116-41028166	HRE	kidney:	n/a
26	chr21:41027785-41027835	SK-N-MC	brain:	n/a
27	chr21:41028116-41028166	HAEpiC	amniotic membrane:	n/a
28	chr21:41027960-41028010	HCM	heart:	n/a
29	chr21:41027785-41027835	LNCaP	prostate:	n/a
30	chr21:41027960-41028010	HPAEpiC	pulmonary alveolar:	n/a
31	chr21:41028116-41028166	MCF-7	breast:	n/a
32	chr21:41027785-41027835	HNPCEpiC	eye:	n/a
33	chr21:41027960-41028010	PFSK-1	brain:	n/a
34	chr21:41027960-41028010	NHDF-neo	bronchial:	n/a
35	chr21:41028116-41028166	NT2-D1	testis:	n/a
36	chr21:41027785-41027835	IMR90	lung:	fetal
37	chr21:41027960-41028010	SAEC	small airway:	n/a
38	chr21:41027785-41027835	NH-A	brain:	n/a
39	chr21:41028116-41028166	HCM	heart:	n/a
40	chr21:41028116-41028166	HRCEpiC	kidney:	n/a
41	chr21:41027785-41027835	AG09309	skin:	n/a
42	chr21:41027960-41028010	SK-N-SH	brain:	n/a
43	chr21:41027960-41028010	HEK293	kidney:	embryo
44	chr21:41027785-41027835	T-47D	breast:	n/a
45	chr21:41027960-41028010	A549	lung:	n/a
46	chr21:41028116-41028166	ECC-1	luminal epithelium:	n/a
47	chr21:41028116-41028166	GM12891	blood:	n/a
48	chr21:41027960-41028010	AG09309	skin:	n/a
49	chr21:41027960-41028010	HIPEpiC	eye:	n/a
50	chr21:41027960-41028010	RPTEC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr21:41002066..41004417-chr21:41008308..41010539,2	MCF-7	breast:
2	chr21:41010805..41012475-chr21:41019016..41021476,3	MCF-7	breast:
3	chr21:41017789..41020626-chr21:41020907..41023254,2	K562	blood:
4	chr21:41006829..41008566-chr21:41050503..41052458,2	K562	blood:
5	chr21:41006012..41008630-chr21:41106556..41108420,2	MCF-7	breast:
6	chr21:41004133..41006069-chr21:41006515..41009780,3	K562	blood:
7	chr21:40996081..40997665-chr21:41007719..41010379,2	MCF-7	breast:
8	chr21:41014679..41017448-chr21:41019798..41023057,5	MCF-7	breast:
9	chr21:40973024..40975835-chr21:41005421..41007852,2	MCF-7	breast:
10	chr21:41004099..41006698-chr21:41012872..41015470,2	MCF-7	breast:
11	chr21:41008366..41010301-chr21:41014021..41016032,2	MCF-7	breast:
12	chr21:41017789..41020626-chr21:41020907..41023254,2	K562	blood:
13	chr21:41010821..41012390-chr21:41020428..41022212,2	MCF-7	breast:
14	chr21:41004099..41006698-chr21:41012872..41015470,2	MCF-7	breast:
15	chr21:41018391..41020649-chr21:41022450..41024228,2	MCF-7	breast:
16	chr21:41019850..41022389-chr21:41024531..41027335,2	MCF-7	breast:
17	chr21:40684766..40687078-chr21:41006043..41008701,2	MCF-7	breast:
18	chr21:41000433..41001034-chr21:41095112..41095627,2	MCF-7	breast:
19	chr21:40894588..40897351-chr21:41015543..41018234,2	MCF-7	breast:
20	chr21:41004133..41006069-chr21:41006515..41009780,3	K562	blood:
21	chr21:41008492..41011019-chr21:41023044..41025077,2	K562	blood:
22	chr21:41018391..41020649-chr21:41022450..41024228,2	MCF-7	breast:
23	chr21:41014663..41016980-chr21:41018711..41021161,2	MCF-7	breast:
24	chr21:40999161..41001792-chr21:41002770..41005621,2	MCF-7	breast:
25	chr21:40890006..40890875-chr21:41002512..41003274,3	MCF-7	breast:
26	chr21:40999161..41001792-chr21:41002770..41005621,2	MCF-7	breast:
27	chr21:41002969..41005777-chr21:41016507..41018108,2	MCF-7	breast:
28	chr21:41015604..41017368-chr21:41021214..41022810,2	K562	blood:
29	chr21:40890053..40890878-chr21:41002462..41003436,4	MCF-7	breast:
30	chr21:41008366..41010301-chr21:41014021..41016032,2	MCF-7	breast:
31	chr21:41005974..41008004-chr21:41008331..41010017,2	MCF-7	breast:
32	chr21:41019850..41022389-chr21:41024531..41027335,2	MCF-7	breast:
33	chr21:40903415..40903990-chr21:41002536..41003380,2	MCF-7	breast:
34	chr21:41002969..41005777-chr21:41016507..41018108,2	MCF-7	breast:
35	chr21:41004609..41006147-chr8:144816816..144819623,2	MCF-7	breast:
36	chr21:41005974..41008004-chr21:41008331..41010017,2	MCF-7	breast:
37	chr21:41011031..41013362-chr21:41020026..41022640,2	K562	blood:
38	chr21:41011031..41013362-chr21:41020026..41022640,2	K562	blood:
39	chr21:41008520..41011159-chr21:41045241..41047961,2	MCF-7	breast:
40	chr21:41010805..41012475-chr21:41019016..41021476,3	MCF-7	breast:
41	chr21:41014679..41017448-chr21:41019798..41023057,5	MCF-7	breast:
42	chr21:41008492..41011019-chr21:41023044..41025077,2	K562	blood:
43	chr21:41014291..41017132-chr21:41084919..41087866,2	MCF-7	breast:
44	chr21:41010821..41012390-chr21:41020428..41022212,2	MCF-7	breast:
45	chr21:41000981..41003548-chr21:41005728..41009282,3	MCF-7	breast:
46	chr21:41015604..41017368-chr21:41021214..41022810,2	K562	blood:
47	chr21:41014110..41017368-chr21:41020532..41022810,3	K562	blood:
48	chr21:41014663..41016980-chr21:41018711..41021161,2	MCF-7	breast:
49	chr21:41014110..41017368-chr21:41020532..41022810,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-IGSF5-2	chr21:41014313-41014403	NONHSAT082205
2	lnc-B3GALT5-1	chr21:41002198-41002417	ENSG00000225330.1

Variant related genes	Relation type
B3GALT5	TF binding region
ENSG00000225330	TF binding region
B3GALT5	CpG island
ENSG00000225330	CpG island
ENSG00000185658	chromatin interactions
ENSG00000255568	chromatin interactions
ENSG00000225330	chromatin interactions

Extended variants
information (count: 1102 )
Associated
traits (count: 72 )

Variant overlapped rSNPs/rCNVs (count:1102 , 50 per page) page: 1 2 3 4 5 6 7 ... 23

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs651029	chr21:41000353-41000354	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs35404587	chr21:41000375-41000376	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs147442191	chr21:41000378-41000379	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs138032486	chr21:41000387-41000388	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs549576659	chr21:41000388-41000389	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs569136789	chr21:41000396-41000397	Weak transcription Strong transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs538132192	chr21:41000404-41000405	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs551696191	chr21:41000445-41000446	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs372610268	chr21:41000500-41000501	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
10	rs149510652	chr21:41000507-41000508	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs183824922	chr21:41000529-41000530	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs143919714	chr21:41000548-41000549	Weak transcription Enhancers Strong transcription ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs79140251	chr21:41000633-41000634	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs189173444	chr21:41000635-41000636	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
15	rs148642103	chr21:41000680-41000681	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs576348436	chr21:41000682-41000683	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs117843320	chr21:41000700-41000701	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs386818573	chr21:41000795-41000796	Weak transcription Enhancers Strong transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs565183263	chr21:41000821-41000822	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs577919480	chr21:41000847-41000848	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs540638070	chr21:41000873-41000874	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs560356254	chr21:41000874-41000875	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs368390005	chr21:41000877-41000878	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs116548538	chr21:41000906-41000907	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs369124628	chr21:41000922-41000923	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs561109532	chr21:41000926-41000927	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs76775221	chr21:41000944-41000945	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs74971027	chr21:41000946-41000947	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs181074514	chr21:41000963-41000964	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs562731790	chr21:41000969-41000970	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs143131746	chr21:41000970-41000971	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs146175705	chr21:41000971-41000972	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs185914388	chr21:41000985-41000986	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs190769527	chr21:41001127-41001128	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs11088488	chr21:41001130-41001131	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs143888274	chr21:41001150-41001151	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs536339030	chr21:41001161-41001162	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs574739207	chr21:41001164-41001165	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs111848461	chr21:41001172-41001173	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs186159705	chr21:41001210-41001211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs558858956	chr21:41001231-41001232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs190481885	chr21:41001239-41001240	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs113495819	chr21:41001265-41001266	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs11088489	chr21:41001279-41001280	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
45	rs573990464	chr21:41001370-41001371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs182691800	chr21:41001386-41001387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs542707217	chr21:41001415-41001416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs139481373	chr21:41001439-41001440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs59617948	chr21:41001441-41001442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs572348999	chr21:41001450-41001451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:72)

Disease	PMID	Source
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Down syndrome	17412756	CNVD
Down syndrome	17576883	CNVD
Acute promyelocytic leukemia	19109227	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Autism	22495311	CNVD
Lung cancer	18438408	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	17387387	CNVD
Renal cell carcinoma	19461508	CNVD
Seminomas	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Prostate cancer	19156837	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
lymphocytic leukemia	21291569	CNVD
Melanoma	18172304	CNVD
Autism	22958593	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Wilms tumour	21544195	CNVD
Ewing''s sarcoma	17952124	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute myeloid leukemia	16864856	CNVD
Mental retardation	21031080	CNVD
Polymicrogyria	21031080	CNVD
periventricular nodular heterotopia	21031080	CNVD
Myelodysplastic syndrome	21606161	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Autism	18414403	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	21858162	CNVD
Neuroblastoma	18923191	CNVD
Breast cancer	17899364	CNVD
Down syndrome	20877625	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Prostate cancer	21147910	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Prostate cancer	17245344	CNVD
Prostate cancer	20473283	CNVD
Chordoma	18071362	CNVD
Breast cancer	22522925	CNVD
T-cell lymphomas	22341440	CNVD
Pancreatic cancer	17952125	CNVD
Cancer	20164919	CNVD
Breast cancer	21509527	CNVD

Chromatin state (count:674 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40985600-41002400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr21:40985600-41008400	Weak transcription	Pancreas	Pancrea
3	chr21:40986000-41004200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr21:40989600-41004600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr21:40990200-41008200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr21:40991400-41002400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr21:40995800-41009000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr21:40997600-41002200	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr21:40997800-41000400	Weak transcription	Fetal Intestine Small	intestine
10	chr21:40997800-41003000	Weak transcription	Fetal Intestine Large	intestine
11	chr21:40997800-41003600	Weak transcription	Rectal Mucosa Donor 31	rectum
12	chr21:40998200-41014800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr21:40998400-41002200	Weak transcription	Stomach Mucosa	stomach
14	chr21:40998400-41002400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr21:40999200-41002400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
16	chr21:40999400-41000400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr21:40999400-41000800	Strong transcription	iPS-18 Cell Line	embryonic stem cell
18	chr21:40999400-41002200	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr21:40999400-41002200	Weak transcription	HUES6 Cell Line	embryonic stem cell
20	chr21:40999400-41002200	Weak transcription	HUES64 Cell Line	embryonic stem cell
21	chr21:40999400-41004200	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr21:40999400-41004800	Weak transcription	Rectal Mucosa Donor 29	rectum
23	chr21:40999400-41007800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
24	chr21:40999600-41001600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
25	chr21:41000000-41000400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr21:41000200-41000600	Enhancers	Right Atrium	heart
27	chr21:41000400-41000600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
28	chr21:41000400-41000600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr21:41000400-41000600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr21:41000400-41001200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr21:41000400-41001200	Enhancers	Fetal Intestine Small	intestine
32	chr21:41000600-41001000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
33	chr21:41000600-41006200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
34	chr21:41000800-41001200	Enhancers	Placenta	Placenta
35	chr21:41000800-41002000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr21:41001000-41001200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr21:41001000-41002200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr21:41001200-41002200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr21:41001200-41002400	Weak transcription	Fetal Intestine Small	intestine
40	chr21:41001200-41005000	Weak transcription	Placenta	Placenta
41	chr21:41001200-41006400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
42	chr21:41001600-41002000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr21:41001600-41005600	Enhancers	ES-I3 Cell Line	embryonic stem cell
44	chr21:41001800-41002000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr21:41001800-41002000	Enhancers	NH-A	brain
46	chr21:41002000-41002200	Enhancers	Fetal Brain Female	brain
47	chr21:41002000-41002200	Flanking Active TSS	A549	lung
48	chr21:41002000-41002200	Enhancers	HSMM	muscle
49	chr21:41002000-41002400	Enhancers	HUVEC	blood vessel
50	chr21:41002000-41002800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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