No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs7527 |
chr21:45175958-45175959 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
2 |
rs562154224 |
chr21:45175959-45175960 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs377597960 |
chr21:45175975-45175976 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs114002037 |
chr21:45175976-45175977 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs529119792 |
chr21:45175977-45175978 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs148529944 |
chr21:45175989-45175990 |
Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs565516422 |
chr21:45176021-45176022 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive regionlncRNA
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs533310449 |
chr21:45176059-45176060 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs551840250 |
chr21:45176069-45176070 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs570009707 |
chr21:45176070-45176071 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs537455251 |
chr21:45176088-45176089 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs141906527 |
chr21:45176105-45176106 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs567995922 |
chr21:45176116-45176117 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs575838956 |
chr21:45176158-45176159 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs374385244 |
chr21:45176160-45176161 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs184901997 |
chr21:45176177-45176178 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs573599993 |
chr21:45176190-45176191 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs150665495 |
chr21:45176198-45176199 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs190786061 |
chr21:45176199-45176200 |
Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs543353139 |
chr21:45176220-45176221 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs576028855 |
chr21:45176255-45176256 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs543422859 |
chr21:45176267-45176268 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs8126928 |
chr21:45176268-45176269 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs529177313 |
chr21:45176303-45176304 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs2070535 |
chr21:45176304-45176305 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs547234266 |
chr21:45176319-45176320 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs369675626 |
chr21:45176321-45176322 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs13051474 |
chr21:45176333-45176334 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
29 |
rs551238965 |
chr21:45176354-45176355 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs373823573 |
chr21:45176370-45176371 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs563824940 |
chr21:45176371-45176372 |
Weak transcription Strong transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs530872487 |
chr21:45176419-45176420 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs549428598 |
chr21:45176422-45176423 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs567664079 |
chr21:45176453-45176454 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs180797597 |
chr21:45176457-45176458 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs547329499 |
chr21:45176480-45176481 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs571922515 |
chr21:45176484-45176485 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs539244272 |
chr21:45176500-45176501 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs557239439 |
chr21:45176505-45176506 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs550980683 |
chr21:45176523-45176524 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs576123181 |
chr21:45176590-45176591 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs184582611 |
chr21:45176605-45176606 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs536723776 |
chr21:45176606-45176607 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs17004606 |
chr21:45176621-45176622 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs139922110 |
chr21:45176629-45176630 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs368833375 |
chr21:45176641-45176642 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs144883761 |
chr21:45176651-45176652 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs577829686 |
chr21:45176670-45176671 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs375819105 |
chr21:45176753-45176754 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs147957333 |
chr21:45176760-45176761 |
Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|