Variant report

Variant nsv461795
Chromosome Location chr1:70475794-70551339
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:273 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:70450800-70481200 Weak transcription Fetal Brain Female brain
2 chr1:70464800-70509000 Weak transcription Brain Angular Gyrus brain
3 chr1:70475000-70475800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr1:70477800-70478200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr1:70478000-70503800 Weak transcription Brain Cingulate Gyrus brain
6 chr1:70479400-70515600 Weak transcription Fetal Brain Male brain
7 chr1:70479800-70503800 Weak transcription Fetal Muscle Trunk muscle
8 chr1:70481200-70481800 Strong transcription Fetal Brain Female brain
9 chr1:70481800-70488400 Weak transcription Fetal Brain Female brain
10 chr1:70483200-70483800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr1:70483400-70485200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:70485200-70488400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:70485200-70503800 Weak transcription Brain Germinal Matrix brain
14 chr1:70485600-70503800 Weak transcription Brain Anterior Caudate brain
15 chr1:70486800-70487200 Enhancers H9 Cell Line embryonic stem cell
16 chr1:70486800-70487200 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr1:70488000-70503200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr1:70488000-70503800 Weak transcription Fetal Muscle Leg muscle
19 chr1:70488400-70488600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:70488400-70489400 Strong transcription Fetal Brain Female brain
21 chr1:70488800-70489200 ZNF genes & repeats Pancreas Pancrea
22 chr1:70489200-70492800 Weak transcription Pancreas Pancrea
23 chr1:70489400-70501400 Weak transcription Fetal Brain Female brain
24 chr1:70492600-70492800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr1:70492800-70495800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:70495000-70495800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr1:70495000-70496800 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr1:70495800-70496000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr1:70495800-70496800 Enhancers HUES48 Cell Line embryonic stem cell
30 chr1:70496800-70499800 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr1:70499000-70499400 Enhancers GM12878-XiMat blood
32 chr1:70499200-70500600 Enhancers ES-I3 Cell Line embryonic stem cell
33 chr1:70499800-70500400 Enhancers HUES48 Cell Line embryonic stem cell
34 chr1:70499800-70500400 Enhancers iPS-18 Cell Line embryonic stem cell
35 chr1:70499800-70500600 Enhancers HUES64 Cell Line embryonic stem cell
36 chr1:70499800-70500800 Enhancers iPS-20b Cell Line embryonic stem cell
37 chr1:70500000-70500600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:70500000-70501200 Enhancers iPS-15b Cell Line embryonic stem cell
39 chr1:70500200-70500800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr1:70500200-70506200 Weak transcription Brain Hippocampus Middle brain
41 chr1:70500400-70500600 Flanking Active TSS HUES48 Cell Line embryonic stem cell
42 chr1:70500600-70501000 Enhancers HUES48 Cell Line embryonic stem cell
43 chr1:70500600-70503800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr1:70500600-70503800 Weak transcription Brain Inferior Temporal Lobe brain
45 chr1:70500600-70503800 Weak transcription Pancreas Pancrea
46 chr1:70501000-70509400 Weak transcription HUES48 Cell Line embryonic stem cell
47 chr1:70501400-70505400 Strong transcription Fetal Brain Female brain
48 chr1:70503200-70503800 Weak transcription Fetal Stomach stomach
49 chr1:70503200-70504600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:70503200-70505000 Strong transcription Brain Dorsolateral Prefrontal Cortex brain

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