Variant report

Variant	nsv461840
Chromosome Location	chr1:71364105-71468493
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:497)
CpG islands
(count:61)
Chromatin interactive
region (count:28)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:497 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr1:71436198-71436440	K562	blood:	n/a	n/a
2	ARID3A	chr1:71460522-71460848	K562	blood:	n/a	n/a
3	ATF1	chr1:71445230-71445327	K562	blood:	n/a	n/a
4	ATF1	chr1:71375175-71375423	K562	blood:	n/a	n/a
5	ATF1	chr1:71427045-71427515	K562	blood:	n/a	n/a
6	ATF1	chr1:71451500-71451902	K562	blood:	n/a	n/a
7	BACH1	chr1:71468156-71468161	K562	blood:	n/a	n/a
8	BACH1	chr1:71377587-71377854	K562	blood:	n/a	n/a
9	BHLHE40	chr1:71465554-71465707	K562	blood:	n/a	n/a
10	BHLHE40	chr1:71436134-71436325	K562	blood:	n/a	n/a
11	BHLHE40	chr1:71427278-71427427	K562	blood:	n/a	n/a
12	CCNT2	chr1:71375173-71375436	K562	blood:	n/a	n/a
13	CEBPB	chr1:71421987-71422201	HepG2	liver:	n/a	chr1:71422081-71422092
14	CEBPB	chr1:71444470-71444536	H1-hESC	embryonic stem cell:	n/a	n/a
15	CEBPB	chr1:71366879-71367147	HepG2	liver:	n/a	chr1:71367020-71367031 chr1:71367021-71367032 chr1:71367020-71367033
16	CEBPB	chr1:71410721-71410977	HepG2	liver:	n/a	chr1:71410833-71410844
17	CEBPB	chr1:71375115-71375469	K562	blood:	n/a	chr1:71375115-71375126 chr1:71375116-71375125
18	CEBPB	chr1:71423310-71423611	IMR90	lung:	n/a	n/a
19	CEBPB	chr1:71467389-71467679	H1-hESC	embryonic stem cell:	n/a	chr1:71467516-71467527 chr1:71467518-71467529 chr1:71467516-71467529
20	CEBPB	chr1:71374999-71375276	IMR90	lung:	n/a	chr1:71375115-71375126 chr1:71375116-71375125 chr1:71375114-71375125
21	CEBPB	chr1:71413576-71413806	HepG2	liver:	n/a	chr1:71413682-71413693 chr1:71413711-71413724
22	CEBPB	chr1:71423305-71423526	K562	blood:	n/a	n/a
23	CEBPB	chr1:71467360-71467695	K562	blood:	n/a	chr1:71467516-71467527 chr1:71467518-71467529 chr1:71467516-71467529
24	CEBPB	chr1:71366936-71367136	IMR90	lung:	n/a	chr1:71367020-71367031 chr1:71367021-71367032 chr1:71367020-71367033
25	CEBPB	chr1:71467353-71467636	A549	lung:	n/a	chr1:71467516-71467527 chr1:71467518-71467529 chr1:71467516-71467529
26	CEBPB	chr1:71422052-71422132	K562	blood:	n/a	chr1:71422081-71422092
27	CEBPB	chr1:71375018-71375229	A549	lung:	n/a	chr1:71375115-71375126 chr1:71375116-71375125 chr1:71375114-71375125
28	CEBPB	chr1:71374950-71375457	K562	blood:	n/a	chr1:71375115-71375126 chr1:71375116-71375125 chr1:71375114-71375125
29	CEBPB	chr1:71413585-71413825	A549	lung:	n/a	chr1:71413682-71413693 chr1:71413711-71413724
30	CEBPB	chr1:71458240-71458524	HepG2	liver:	n/a	chr1:71458394-71458405 chr1:71458394-71458407
31	CEBPB	chr1:71458228-71458549	K562	blood:	n/a	chr1:71458394-71458405 chr1:71458394-71458407
32	CEBPB	chr1:71467358-71467677	IMR90	lung:	n/a	chr1:71467516-71467527 chr1:71467518-71467529 chr1:71467516-71467529
33	CEBPB	chr1:71467330-71467690	HepG2	liver:	n/a	chr1:71467516-71467527 chr1:71467518-71467529 chr1:71467516-71467529
34	CEBPB	chr1:71374995-71375217	HepG2	liver:	n/a	chr1:71375115-71375126 chr1:71375116-71375125 chr1:71375114-71375125
35	CEBPD	chr1:71438637-71439063	K562	blood:	n/a	n/a
36	CREB1	chr1:71375681-71375975	GM12878	blood:	n/a	n/a
37	CTCF	chr1:71431840-71431990	HUVEC	blood vessel:	n/a	n/a
38	CTCF	chr1:71429151-71429442	GM12878	blood:	n/a	n/a
39	CTCF	chr1:71431815-71431986	LNCaP	prostate:	n/a	n/a
40	CTCF	chr1:71460680-71460830	K562	blood:	n/a	n/a
41	CTCF	chr1:71431840-71431990	RPTEC	kidney:	n/a	n/a
42	CTCF	chr1:71429180-71429330	MCF-7	breast:	n/a	n/a
43	CTCF	chr1:71431820-71431970	HCM	heart:	n/a	n/a
44	CTCF	chr1:71367780-71367930	AG10803	skin:	n/a	n/a
45	CTCF	chr1:71460527-71460872	K562	blood:	n/a	n/a
46	CTCF	chr1:71431800-71431950	AG09309	skin:	n/a	n/a
47	CTCF	chr1:71429200-71429350	GM12868	blood:	n/a	n/a
48	CTCF	chr1:71431800-71431950	GM12868	blood:	n/a	n/a
49	CTCF	chr1:71431840-71431990	GM06990	blood:	n/a	n/a
50	CTCF	chr1:71431820-71431970	AG10803	skin:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:71418388-71418438	ovcar-3	ovarian:	n/a
2	chr1:71418388-71418438	H1-hESC	embryonic stem cell:	embryo
3	chr1:71418388-71418438	BE2_C	brain:	n/a
4	chr1:71418388-71418438	AoSMC	blood vessel:	n/a
5	chr1:71418388-71418438	PFSK-1	brain:	n/a
6	chr1:71418388-71418438	HAEpiC	amniotic membrane:	n/a
7	chr1:71418388-71418438	HEEpiC	esophagus:	n/a
8	chr1:71418388-71418438	HCF	heart:	n/a
9	chr1:71418388-71418438	AG04450	lung:	fetal
10	chr1:71418388-71418438	GM06990	blood:	n/a
11	chr1:71418388-71418438	GM12878	blood:	n/a
12	chr1:71418388-71418438	HPAEpiC	pulmonary alveolar:	n/a
13	chr1:71418388-71418438	A549	lung:	n/a
14	chr1:71418388-71418438	SK-N-MC	brain:	n/a
15	chr1:71418388-71418438	AG09319	gingival:	n/a
16	chr1:71418388-71418438	HRCEpiC	kidney:	n/a
17	chr1:71418388-71418438	NB4	blood:	n/a
18	chr1:71418388-71418438	ECC-1	luminal epithelium:	n/a
19	chr1:71418388-71418438	GM12892	blood:	n/a
20	chr1:71418388-71418438	SKMC	muscle:	n/a
21	chr1:71418388-71418438	HIPEpiC	eye:	n/a
22	chr1:71418388-71418438	NH-A	brain:	n/a
23	chr1:71418388-71418438	K562	blood:	n/a
24	chr1:71418388-71418438	HL-60	blood:	n/a
25	chr1:71418388-71418438	Hela-S3	cervix:	n/a
26	chr1:71418388-71418438	AG04449	skin:	fetal
27	chr1:71418388-71418438	HCM	heart:	n/a
28	chr1:71418388-71418438	HMEC	breast:	n/a
29	chr1:71418388-71418438	U87	brain:	n/a
30	chr1:71418388-71418438	Jurkat	blood:	n/a
31	chr1:71418388-71418438	NHBE	bronchial:	n/a
32	chr1:71418388-71418438	SK-N-SH_RA	brain:	n/a
33	chr1:71418388-71418438	GM12891	blood:	n/a
34	chr1:71418388-71418438	IMR90	lung:	fetal
35	chr1:71418388-71418438	PANC-1	pancreas:	n/a
36	chr1:71418388-71418438	HNPCEpiC	eye:	n/a
37	chr1:71418388-71418438	Caco-2	colon:	n/a
38	chr1:71418388-71418438	HCT-116	colon:	n/a
39	chr1:71418388-71418438	PrEC	prostate:	n/a
40	chr1:71418388-71418438	AG09309	skin:	n/a
41	chr1:71418388-71418438	HEK293	kidney:	embryo
42	chr1:71418388-71418438	NHDF-neo	bronchial:	n/a
43	chr1:71418388-71418438	AG10803	skin:	n/a
44	chr1:71418388-71418438	HRE	kidney:	n/a
45	chr1:71418388-71418438	HUVEC	blood vessel:	n/a
46	chr1:71418388-71418438	LNCaP	prostate:	n/a
47	chr1:71418388-71418438	GM19239	blood:	n/a
48	chr1:71418388-71418438	Hepatocyte	liver:	n/a
49	chr1:71418388-71418438	MCF-7	breast:	n/a
50	chr1:71418388-71418438	HCPEpiC	choroid plexus:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:71373472..71375942-chr1:71510520..71512137,2	K562	blood:
2	chr1:71389776..71391612-chr1:71519550..71521085,2	K562	blood:
3	chr1:71371588..71372088-chr13:111314049..111314743,2	Hela-S3	cervix:
4	chr1:71467023..71468927-chr1:71512007..71514052,2	K562	blood:
5	chr1:71381219..71383532-chr1:71401301..71402871,2	K562	blood:
6	chr1:71411854..71414751-chr1:71416719..71419463,2	K562	blood:
7	chr1:71372779..71374433-chr1:71377421..71380381,2	K562	blood:
8	chr1:71398892..71400673-chr1:71400772..71403313,2	K562	blood:
9	chr1:71381219..71383532-chr1:71401301..71402871,2	K562	blood:
10	chr1:71423003..71424991-chr1:71446277..71448535,2	K562	blood:
11	chr1:71423003..71424991-chr1:71446277..71448535,2	K562	blood:
12	chr1:71443738..71447073-chr1:71448870..71451609,5	K562	blood:
13	chr1:71443738..71447073-chr1:71448870..71451609,5	K562	blood:
14	chr1:71440403..71443013-chr1:71443324..71446288,2	K562	blood:
15	chr1:71442791..71448002-chr1:71448870..71452211,5	K562	blood:
16	chr1:71150765..71151639-chr1:71429287..71429792,2	MCF-7	breast:
17	chr1:71427617..71429337-chr1:71437684..71440303,2	K562	blood:
18	chr1:71402954..71404643-chr1:71411844..71413632,2	K562	blood:
19	chr1:71372779..71374433-chr1:71377421..71380381,2	K562	blood:
20	chr1:71374929..71377417-chr1:71518030..71520956,2	K562	blood:
21	chr1:71378991..71380997-chr1:71383679..71385899,2	K562	blood:
22	chr1:71442791..71448002-chr1:71448870..71452211,5	K562	blood:
23	chr1:71378991..71380997-chr1:71383679..71385899,2	K562	blood:
24	chr1:71398892..71400673-chr1:71400772..71403313,2	K562	blood:
25	chr1:71427617..71429337-chr1:71437684..71440303,2	K562	blood:
26	chr1:71348952..71350575-chr1:71372335..71374257,2	K562	blood:
27	chr1:70975940..70976451-chr1:71428828..71429462,2	MCF-7	breast:
28	chr1:71440403..71443013-chr1:71443324..71446288,2	K562	blood:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CTH-3	chr1:71416584-71417176	ENSG00000235782.1
2	lnc-CTH-14	chr1:71461328-71461385	l_71_chr1:71319635-71475982_testes
3	lnc-CTH-12	chr1:71430529-71431707	NONHSAT003873
4	lnc-CTH-3	chr1:71413062-71413158	ENSG00000235782.1
5	lnc-CTH-12	chr1:71426588-71426941	NONHSAT003873
6	lnc-CTH-3	chr1:71416418-71416476	ENSG00000235782.1

No data

Variant related genes	Relation type
ENSG00000235782	TF binding region
ENSG00000235782	CpG island
ENSG00000050628	chromatin interactions
ENSG00000235782	chromatin interactions

Extended variants
information (count: 3469 )
Associated
traits (count: 104 )

Variant overlapped rSNPs/rCNVs (count:3469 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1409165	chr1:71364105-71364106	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs550119621	chr1:71364150-71364151	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs34077947	chr1:71364159-71364160	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs181382159	chr1:71364165-71364166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs558588208	chr1:71364221-71364222	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs75446561	chr1:71364226-71364227	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs74089104	chr1:71364269-71364270	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs566270790	chr1:71364317-71364318	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs535271903	chr1:71364348-71364349	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs113885609	chr1:71364374-71364375	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs117787471	chr1:71364387-71364388	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs574448466	chr1:71364388-71364389	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs536764515	chr1:71364455-71364456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs377392948	chr1:71364503-71364504	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534482510	chr1:71364644-71364645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs11809374	chr1:71364661-71364662	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs552877852	chr1:71364674-71364675	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs576767108	chr1:71364684-71364685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs201007495	chr1:71364688-71364689	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs373796870	chr1:71364689-71364690	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs397960398	chr1:71364692-71364693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs546433433	chr1:71364699-71364700	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs552890140	chr1:71364737-71364738	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs17131487	chr1:71364790-71364791	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs186450961	chr1:71364802-71364803	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs561754705	chr1:71364878-71364879	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs143733076	chr1:71364920-71364921	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs11209710	chr1:71365018-71365019	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs575085773	chr1:71365022-71365023	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs563651312	chr1:71365087-71365088	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs368422874	chr1:71365101-71365102	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs34561844	chr1:71365109-71365110	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs375640770	chr1:71365114-71365115	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs58659672	chr1:71365119-71365120	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs115423857	chr1:71365151-71365152	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs34604343	chr1:71365162-71365163	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs146576479	chr1:71365181-71365182	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs141364861	chr1:71365236-71365237	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs568572709	chr1:71365244-71365245	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs145101566	chr1:71365250-71365251	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs537104694	chr1:71365255-71365256	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs577532670	chr1:71365260-71365261	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs565810419	chr1:71365262-71365263	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs1359834	chr1:71365365-71365366	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs115571486	chr1:71365370-71365371	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs138932435	chr1:71365386-71365387	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs560123714	chr1:71365403-71365404	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs552826286	chr1:71365413-71365414	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs34924264	chr1:71365492-71365493	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs1359835	chr1:71365494-71365495	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:104)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Coronary Disease	20032323	CNVD
Prostate cancer	21965145	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Stargardt''s disease	17277736	CNVD
Neuroblastoma	17897457	CNVD
Uveal melanoma	21693616	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Neuroblastoma	21484798	CNVD
Non-syndromic sensorineural hearing loss	22290220	CNVD
Liposarcoma	21253554	CNVD
Breast cancer	21264507	CNVD
Acute myeloid leukemia	16864856	CNVD
Astrocytoma	17387387	CNVD
Cancer	21499728	CNVD
Glioblastoma multiforme	17387387	CNVD
Oligodendroglial tumors	17285580	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Neuroblastoma	17535989	CNVD
Pheochromocytoma	17535989	CNVD
Prostate cancer	16705090	CNVD
Astrocytoma	17934521	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Neuroblastoma	17533364	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Autism	22495311	CNVD
Non-small cell lung cancer	21385341	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Chordoma	21602918	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Multiple myeloma	16461302	CNVD
Melanoma	17363583	CNVD
Cancer	21129771	CNVD
Autosomal dominant nocturnal frontal lobe epilepsy	18472482	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-small cell lung cancer	20864512	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Thrombocytopenia-absent radius syndrome	21933853	CNVD
Psychiatric disorder	22848183	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Hepatocellular carcinoma	16750200	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	20409316	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17393978	CNVD
Cervical cancer	21062161	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21364760	CNVD
Rett syndrome	21593744	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16608533	CNVD
Ovarian cancer	21720365	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17133270	CNVD
Type 2 diabetes	21956041	CNVD
Uveal melanoma	20484589	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
abnormal development	18461090	CNVD
Ewing''s sarcoma	17952124	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Poland''s syndrome	22110015	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21922591	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Cancer	22429812	CNVD
Effusion lymphoma	18079361	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cancer	20164920	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:210 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71361400-71364400	Enhancers	K562	blood
2	chr1:71361600-71364800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr1:71361800-71365000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr1:71362000-71365400	Weak transcription	NHDF-Ad	bronchial
5	chr1:71363000-71364800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr1:71363400-71365000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr1:71363400-71365000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr1:71364800-71365400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr1:71364800-71365400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr1:71364800-71366400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr1:71365000-71365800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr1:71365000-71366400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr1:71365000-71366800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr1:71365400-71365800	Enhancers	NHDF-Ad	bronchial
15	chr1:71365400-71366600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr1:71365800-71366800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr1:71366600-71366800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr1:71366800-71367000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr1:71372200-71373400	Enhancers	Monocytes-CD14+_RO01746	blood
20	chr1:71372200-71376400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr1:71372400-71376000	Enhancers	Primary hematopoietic stem cells short term culture	blood
22	chr1:71372400-71376200	Enhancers	Primary hematopoietic stem cells	blood
23	chr1:71372400-71376200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr1:71372600-71373800	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr1:71372800-71373200	Enhancers	Primary T cells from cord blood	blood
26	chr1:71372800-71377200	Enhancers	Dnd41	blood
27	chr1:71373200-71373600	Weak transcription	Primary T cells from cord blood	blood
28	chr1:71373200-71374800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
29	chr1:71373600-71376600	Enhancers	Primary T cells from cord blood	blood
30	chr1:71374000-71375200	Enhancers	Fetal Thymus	thymus
31	chr1:71374600-71376200	Enhancers	K562	blood
32	chr1:71374800-71376000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
33	chr1:71375200-71375600	Weak transcription	Fetal Thymus	thymus
34	chr1:71375600-71376600	Enhancers	Fetal Thymus	thymus
35	chr1:71376000-71376600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
36	chr1:71376200-71376600	Weak transcription	K562	blood
37	chr1:71376600-71377400	Enhancers	K562	blood
38	chr1:71377200-71380400	Weak transcription	Dnd41	blood
39	chr1:71377400-71381200	Weak transcription	K562	blood
40	chr1:71380400-71380800	Enhancers	Fetal Heart	heart
41	chr1:71380400-71382200	Enhancers	Adipose Nuclei	Adipose
42	chr1:71380400-71383400	Enhancers	Dnd41	blood
43	chr1:71380600-71380800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
44	chr1:71380600-71381200	Enhancers	Brain Germinal Matrix	brain
45	chr1:71380600-71381600	Enhancers	Rectal Smooth Muscle	rectum
46	chr1:71380800-71381400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr1:71380800-71381400	Enhancers	Colon Smooth Muscle	Colon
48	chr1:71381200-71381400	Enhancers	K562	blood
49	chr1:71381400-71382200	Weak transcription	K562	blood
50	chr1:71381400-71382600	Weak transcription	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links