Variant report

Variant nsv461979
Chromosome Location chr5:12599348-12670184
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:242 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:12598400-12610600 Weak transcription K562 blood
2 chr5:12602000-12612400 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr5:12602400-12602800 Enhancers Fetal Brain Male brain
4 chr5:12610600-12610800 Enhancers K562 blood
5 chr5:12610800-12612000 Active TSS K562 blood
6 chr5:12612000-12612200 Flanking Active TSS K562 blood
7 chr5:12612200-12614200 Enhancers K562 blood
8 chr5:12612400-12612600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
9 chr5:12613400-12613600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr5:12613600-12617600 Enhancers Dnd41 blood
11 chr5:12614200-12615000 Flanking Active TSS K562 blood
12 chr5:12614600-12615200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr5:12614800-12616000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr5:12615000-12615200 Active TSS K562 blood
15 chr5:12615200-12615400 Flanking Active TSS K562 blood
16 chr5:12615200-12615600 Enhancers HUES64 Cell Line embryonic stem cell
17 chr5:12615400-12615600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr5:12615400-12615600 Active TSS K562 blood
19 chr5:12615600-12616200 Flanking Active TSS K562 blood
20 chr5:12615600-12627200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr5:12616200-12616600 Enhancers K562 blood
22 chr5:12616200-12622800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr5:12616600-12616800 Flanking Active TSS K562 blood
24 chr5:12616800-12617400 Enhancers K562 blood
25 chr5:12617400-12618200 Weak transcription K562 blood
26 chr5:12618200-12618600 ZNF genes & repeats K562 blood
27 chr5:12618400-12621800 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr5:12618600-12618800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
29 chr5:12618800-12621000 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr5:12621000-12624000 Enhancers HUES48 Cell Line embryonic stem cell
31 chr5:12621400-12623800 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr5:12621600-12624600 Enhancers HUES64 Cell Line embryonic stem cell
33 chr5:12621600-12625400 Weak transcription Pancreatic Islets Pancreatic Islet
34 chr5:12621800-12623600 Enhancers iPS-20b Cell Line embryonic stem cell
35 chr5:12622400-12624600 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr5:12622600-12623200 Enhancers HUES6 Cell Line embryonic stem cell
37 chr5:12622600-12623600 Enhancers H1 Cell Line embryonic stem cell
38 chr5:12622600-12624000 Enhancers iPS-18 Cell Line embryonic stem cell
39 chr5:12622600-12624200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
40 chr5:12622600-12625000 Enhancers H9 Cell Line embryonic stem cell
41 chr5:12622800-12623200 Enhancers ES-WA7 Cell Line embryonic stem cell
42 chr5:12622800-12623200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:12622800-12625200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr5:12622800-12625200 Enhancers Cortex derived primary cultured neurospheres brain
45 chr5:12623000-12624000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
46 chr5:12623200-12624200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
47 chr5:12623200-12624800 Weak transcription ES-WA7 Cell Line embryonic stem cell
48 chr5:12623200-12625000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr5:12623200-12626400 Enhancers K562 blood
50 chr5:12623600-12624000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived

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