Variant report

Variant nsv462184
Chromosome Location chr1:80297950-80731568
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:392 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:80297400-80298000 Enhancers HUES6 Cell Line embryonic stem cell
2 chr1:80297400-80298200 Enhancers iPS-18 Cell Line embryonic stem cell
3 chr1:80297800-80300200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:80306600-80307000 Enhancers HUES6 Cell Line embryonic stem cell
5 chr1:80306800-80307200 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr1:80306800-80307200 Enhancers HUES48 Cell Line embryonic stem cell
7 chr1:80306800-80307200 Enhancers HUES64 Cell Line embryonic stem cell
8 chr1:80306800-80307200 Enhancers iPS-20b Cell Line embryonic stem cell
9 chr1:80307200-80313600 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:80308800-80309400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:80311600-80314400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:80312200-80314400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:80312800-80313600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr1:80312800-80314000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr1:80312800-80314200 Enhancers Ovary ovary
16 chr1:80313400-80313800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:80313400-80314200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr1:80313400-80314600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:80313600-80314000 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr1:80313600-80314200 Enhancers HUES48 Cell Line embryonic stem cell
21 chr1:80313600-80318800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:80313800-80314400 Enhancers HMEC breast
23 chr1:80313800-80314600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:80313800-80318600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:80314400-80318400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:80314600-80318200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:80318200-80318600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr1:80318400-80320200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr1:80318400-80320400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:80318600-80318800 Enhancers HUES6 Cell Line embryonic stem cell
31 chr1:80318600-80319000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
32 chr1:80318600-80319000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:80318600-80319000 Active TSS Brain Angular Gyrus brain
34 chr1:80318800-80320200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr1:80319000-80319200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr1:80319000-80320000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr1:80319200-80319600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:80319400-80319600 Enhancers HUES6 Cell Line embryonic stem cell
39 chr1:80319600-80319800 Enhancers HUES64 Cell Line embryonic stem cell
40 chr1:80323400-80324600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr1:80323800-80324200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
42 chr1:80324000-80327000 Enhancers HUVEC blood vessel
43 chr1:80324200-80324600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr1:80324600-80324800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:80324600-80324800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:80324600-80324800 Bivalent Enhancer Stomach Mucosa stomach
47 chr1:80324600-80325000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr1:80324600-80325000 Enhancers Rectal Mucosa Donor 31 rectum
49 chr1:80324600-80325200 Enhancers Gastric stomach
50 chr1:80324600-80325200 Enhancers Ovary ovary

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