Variant report

Variant	nsv462735
Chromosome Location	chr6:29918099-29937833
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1056)
CpG islands
(count:1710)
Chromatin interactive
region (count:32)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1056 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:29933748-29934309	K562	blood:	n/a	n/a
2	ARID3A	chr6:29934522-29934914	K562	blood:	n/a	n/a
3	ARID3A	chr6:29935249-29935871	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:29922852-29922901	K562	blood:	n/a	n/a
5	ARID3A	chr6:29932290-29932954	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:29931139-29931164	K562	blood:	n/a	n/a
7	ARID3A	chr6:29937042-29937091	K562	blood:	n/a	n/a
8	ARID3A	chr6:29935252-29935904	K562	blood:	n/a	n/a
9	ARID3A	chr6:29933775-29934240	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:29932477-29933236	K562	blood:	n/a	n/a
11	ATF1	chr6:29932584-29933076	K562	blood:	n/a	n/a
12	ATF1	chr6:29935286-29935585	K562	blood:	n/a	n/a
13	ATF2	chr6:29932433-29933091	GM12878	blood:	n/a	n/a
14	ATF2	chr6:29932488-29932978	GM12878	blood:	n/a	n/a
15	ATF3	chr6:29932615-29932943	K562	blood:	n/a	n/a
16	ATF3	chr6:29932539-29933023	K562	blood:	n/a	n/a
17	BACH1	chr6:29932608-29933062	K562	blood:	n/a	n/a
18	BACH1	chr6:29932453-29933278	H1-hESC	embryonic stem cell:	n/a	n/a
19	BATF	chr6:29932589-29933017	GM12878	blood:	n/a	chr6:29932797-29932808 chr6:29932798-29932808
20	BATF	chr6:29932612-29932987	GM12878	blood:	n/a	chr6:29932797-29932808 chr6:29932798-29932808
21	BCL11A	chr6:29932639-29932881	GM12878	blood:	n/a	chr6:29932797-29932806
22	BCL11A	chr6:29932602-29932969	GM12878	blood:	n/a	chr6:29932797-29932806
23	BCL3	chr6:29932533-29932943	GM12878	blood:	n/a	chr6:29932797-29932806
24	BCLAF1	chr6:29932428-29933119	GM12878	blood:	n/a	chr6:29932797-29932806
25	BCLAF1	chr6:29932494-29933203	GM12878	blood:	n/a	chr6:29932797-29932806
26	BHLHE40	chr6:29920783-29921023	A549	lung:	n/a	n/a
27	BHLHE40	chr6:29932569-29933159	K562	blood:	n/a	n/a
28	BHLHE40	chr6:29933714-29934091	HepG2	liver:	n/a	n/a
29	BHLHE40	chr6:29934607-29934610	GM12878	blood:	n/a	n/a
30	BHLHE40	chr6:29935166-29935758	K562	blood:	n/a	n/a
31	BHLHE40	chr6:29920974-29921274	K562	blood:	n/a	n/a
32	BHLHE40	chr6:29933686-29934301	K562	blood:	n/a	n/a
33	BHLHE40	chr6:29932548-29933279	GM12878	blood:	n/a	n/a
34	BHLHE40	chr6:29933866-29934118	GM12878	blood:	n/a	n/a
35	CBX3	chr6:29935109-29935665	K562	blood:	n/a	n/a
36	CBX3	chr6:29933685-29934511	HCT-116	colon:	n/a	n/a
37	CBX3	chr6:29935860-29936460	HCT-116	colon:	n/a	n/a
38	CBX3	chr6:29935905-29936437	HCT-116	colon:	n/a	n/a
39	CBX3	chr6:29932504-29933475	K562	blood:	n/a	n/a
40	CBX3	chr6:29920575-29921454	HCT-116	colon:	n/a	n/a
41	CBX3	chr6:29932403-29933273	HCT-116	colon:	n/a	n/a
42	CBX3	chr6:29932608-29932997	K562	blood:	n/a	n/a
43	CCNT2	chr6:29932623-29932970	K562	blood:	n/a	n/a
44	CCNT2	chr6:29935317-29935569	K562	blood:	n/a	n/a
45	CEBPB	chr6:29932409-29933285	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr6:29935064-29935418	HepG2	liver:	n/a	chr6:29935249-29935260 chr6:29935210-29935221
47	CEBPB	chr6:29935138-29935549	K562	blood:	n/a	chr6:29935249-29935260 chr6:29935210-29935221
48	CEBPB	chr6:29932426-29933189	K562	blood:	n/a	n/a
49	CEBPB	chr6:29935073-29935816	K562	blood:	n/a	chr6:29935249-29935260 chr6:29935210-29935221
50	CEBPB	chr6:29929562-29929884	HepG2	liver:	n/a	n/a

(count:1710 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:29932864-29932914	NHBE	bronchial:	n/a
2	chr6:29922522-29922572	PrEC	prostate:	n/a
3	chr6:29932864-29932914	NHBE	bronchial:	n/a
4	chr6:29922522-29922572	PrEC	prostate:	n/a
5	chr6:29932743-29932793	NHBE	bronchial:	n/a
6	chr6:29923913-29923963	HEEpiC	esophagus:	n/a
7	chr6:29924299-29924349	PANC-1	pancreas:	n/a
8	chr6:29932864-29932914	GM12892	blood:	n/a
9	chr6:29924067-29924117	T-47D	breast:	n/a
10	chr6:29924299-29924349	MCF10A-Er-Src	breast:	n/a
11	chr6:29928362-29928412	NHDF-neo	bronchial:	n/a
12	chr6:29924407-29924457	AG09319	gingival:	n/a
13	chr6:29923954-29924004	MCF10A-Er-Src	breast:	n/a
14	chr6:29924299-29924349	A549	lung:	n/a
15	chr6:29928362-29928412	Hepatocyte	liver:	n/a
16	chr6:29924202-29924252	RPTEC	kidney:	n/a
17	chr6:29922522-29922572	HCT-116	colon:	n/a
18	chr6:29932743-29932793	RPTEC	kidney:	n/a
19	chr6:29933411-29933461	AG04449	skin:	fetal
20	chr6:29924207-29924257	HIPEpiC	eye:	n/a
21	chr6:29924067-29924117	AG04450	lung:	fetal
22	chr6:29923954-29924004	NHBE	bronchial:	n/a
23	chr6:29924207-29924257	NH-A	brain:	n/a
24	chr6:29924475-29924525	A549	lung:	n/a
25	chr6:29920309-29920359	RPTEC	kidney:	n/a
26	chr6:29933697-29933747	LNCaP	prostate:	n/a
27	chr6:29924407-29924457	BE2_C	brain:	n/a
28	chr6:29920309-29920359	MCF-7	breast:	n/a
29	chr6:29928362-29928412	HCF	heart:	n/a
30	chr6:29921779-29921829	SK-N-MC	brain:	n/a
31	chr6:29924310-29924360	AG09319	gingival:	n/a
32	chr6:29924256-29924306	HL-60	blood:	n/a
33	chr6:29924310-29924360	NB4	blood:	n/a
34	chr6:29924067-29924117	GM19239	blood:	n/a
35	chr6:29924247-29924297	HNPCEpiC	eye:	n/a
36	chr6:29924207-29924257	SK-N-MC	brain:	n/a
37	chr6:29922522-29922572	SKMC	muscle:	n/a
38	chr6:29924247-29924297	AG04449	skin:	fetal
39	chr6:29924471-29924521	HUVEC	blood vessel:	n/a
40	chr6:29922522-29922572	HCF	heart:	n/a
41	chr6:29933971-29934021	HEK293	kidney:	embryo
42	chr6:29924207-29924257	PFSK-1	brain:	n/a
43	chr6:29924299-29924349	HAEpiC	amniotic membrane:	n/a
44	chr6:29924256-29924306	GM12892	blood:	n/a
45	chr6:29924299-29924349	Jurkat	blood:	n/a
46	chr6:29924310-29924360	SK-N-SH_RA	brain:	n/a
47	chr6:29924404-29924454	PrEC	prostate:	n/a
48	chr6:29921779-29921829	CMK	blood:	n/a
49	chr6:29923913-29923963	Hepatocyte	liver:	n/a
50	chr6:29924207-29924257	IMR90	lung:	fetal

(count:32 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:29937339..29939716-chr6:29942275..29944965,3	MCF-7	breast:
2	chr6:29920547..29922811-chr6:29925895..29928597,2	MCF-7	breast:
3	chr6:29937696..29939359-chr6:30032545..30034517,2	K562	blood:
4	chr6:29917426..29919477-chr6:29924161..29925991,2	K562	blood:
5	chr6:29932263..29935141-chr6:29936079..29939709,3	K562	blood:
6	chr6:29931972..29934794-chr6:30027595..30029471,2	K562	blood:
7	chr6:29820931..29821695-chr6:29935492..29936150,2	MCF-7	breast:
8	chr6:29920527..29922060-chr6:29926055..29928693,2	K562	blood:
9	chr6:29931492..29933251-chr6:30034694..30036479,2	K562	blood:
10	chr6:29815528..29816550-chr6:29935117..29936165,4	MCF-7	breast:
11	chr6:29892582..29894711-chr6:29932418..29935205,2	K562	blood:
12	chr6:29929604..29934270-chr6:29942846..29948120,6	K562	blood:
13	chr6:29933916..29936718-chr6:29943405..29945040,3	MCF-7	breast:
14	chr6:29920527..29922060-chr6:29926055..29928693,2	K562	blood:
15	chr6:29917413..29919975-chr6:29932108..29934788,2	K562	blood:
16	chr6:29927397..29931336-chr6:29932208..29936273,8	K562	blood:
17	chr6:29932263..29935141-chr6:29936079..29939709,3	K562	blood:
18	chr6:29927397..29931336-chr6:29932208..29936273,8	K562	blood:
19	chr6:29921960..29924230-chr6:29934596..29936833,2	K562	blood:
20	chr6:29820786..29821478-chr6:29935191..29935715,2	MCF-7	breast:
21	chr6:29937399..29939324-chr6:29949163..29951713,2	K562	blood:
22	chr6:29917413..29919975-chr6:29932108..29934788,2	K562	blood:
23	chr6:29820057..29821697-chr6:29920603..29922626,2	K562	blood:
24	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:
25	chr6:29931653..29934276-chr6:29943760..29946372,5	K562	blood:
26	chr14:77247003..77248532-chr6:29931290..29933642,2	K562	blood:
27	chr6:29921960..29924230-chr6:29934596..29936833,2	K562	blood:
28	chr6:29917977..29920432-chr6:29924161..29926474,2	K562	blood:
29	chr6:29920547..29922811-chr6:29925895..29928597,2	MCF-7	breast:
30	chr6:29764926..29767618-chr6:29920990..29923179,3	MCF-7	breast:
31	chr6:29926306..29930004-chr6:29943804..29947247,3	K562	blood:
32	chr6:29917150..29919030-chr6:29920403..29922798,2	MCF-7	breast:

No data

Variant related genes	Relation type
HLA-W	TF binding region
HLA-W	CpG island
ENSG00000259081	chromatin interactions
ENSG00000233265	chromatin interactions
ENSG00000235290	chromatin interactions
ENSG00000230795	chromatin interactions
ENSG00000204619	chromatin interactions
ENSG00000204623	chromatin interactions
ENSG00000066379	chromatin interactions
ENSG00000204625	chromatin interactions

Extended variants
information (count: 1415 )
Associated
traits (count: 113 )

Variant overlapped rSNPs/rCNVs (count:1415 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2517713	chr6:29918099-29918100	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
2	rs9260378	chr6:29918102-29918103	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs9260379	chr6:29918124-29918125	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs527964532	chr6:29918139-29918140	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs386698590	chr6:29918140-29918141	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs9260380	chr6:29918141-29918142	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs200406360	chr6:29918158-29918159	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs2517712	chr6:29918173-29918174	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
9	rs9260381	chr6:29918186-29918187	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
10	rs9260382	chr6:29918198-29918199	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs115151171	chr6:29918218-29918219	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs9260383	chr6:29918219-29918220	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs9260384	chr6:29918236-29918237	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs386698591	chr6:29918254-29918255	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs9260385	chr6:29918256-29918257	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs558003737	chr6:29918267-29918268	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs180865514	chr6:29918270-29918271	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs187379176	chr6:29918276-29918277	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs9260386	chr6:29918284-29918285	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs2517711	chr6:29918288-29918289	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	mRNA abundance
21	rs573394391	chr6:29918289-29918290	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs9260388	chr6:29918290-29918291	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs561924425	chr6:29918292-29918293	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs386698593	chr6:29918296-29918297	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs547792890	chr6:29918297-29918298	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs572943237	chr6:29918310-29918311	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs374106502	chr6:29918311-29918312	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs28994659	chr6:29918312-29918313	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs9260391	chr6:29918315-29918316	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
30	rs9260392	chr6:29918357-29918358	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs369668169	chr6:29918362-29918363	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs115315864	chr6:29918385-29918386	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs9260393	chr6:29918401-29918402	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs3115638	chr6:29918402-29918403	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs192123165	chr6:29918435-29918436	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs2508037	chr6:29918436-29918437	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
37	rs534781204	chr6:29918437-29918438	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs3115637	chr6:29918453-29918454	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
39	rs112973287	chr6:29918454-29918455	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs536690759	chr6:29918468-29918469	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs556523941	chr6:29918484-29918485	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs3094674	chr6:29918538-29918539	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs115072926	chr6:29918547-29918548	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs558992253	chr6:29918554-29918555	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs149433401	chr6:29918557-29918558	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs552553843	chr6:29918573-29918574	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs3094673	chr6:29918579-29918580	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs1655907	chr6:29918587-29918588	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
49	rs1655908	chr6:29918616-29918617	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs1632876	chr6:29918619-29918620	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:113)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
Hepatocellular carcinoma	16750200	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	17133270	CNVD
Autism	22495311	CNVD
Cancer	16790693	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21785460	CNVD
Retinoblastoma	16790693	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Systemic lupus erythematosus	17503323	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18765545	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Gastric cancer	17908304	CNVD
Metanephric adenoma	20802469	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Schizophrenia	19571809	CNVD
Schizophrenia	19571808	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
abnormal development	18461090	CNVD
Breast cancer	21509527	CNVD
Melanoma	17363583	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16397240	CNVD
Retinoblastoma	22278416	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Systemic lupus erythematosus	20877625	CNVD
Cleidocranial dysplasia	18696259	CNVD
Holoprosencephaly	21359414	CNVD
Liposarcoma	21253554	CNVD
Uveal melanoma	20484589	CNVD
Fibroblasts	20926602	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Pancreatic cancer	17952125	CNVD
Glioma	20126413	CNVD

Chromatin state (count:804 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:29911200-29920200	Weak transcription	A549	lung
2	chr6:29911200-29921400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr6:29911600-29920400	Weak transcription	Fetal Brain Male	brain
4	chr6:29912600-29921000	Weak transcription	Psoas Muscle	Psoas
5	chr6:29912800-29924200	Weak transcription	Right Atrium	heart
6	chr6:29913000-29924000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
7	chr6:29913000-29924200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr6:29913400-29918800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr6:29913400-29919600	Weak transcription	Fetal Muscle Trunk	muscle
10	chr6:29913400-29920800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr6:29913400-29932200	Weak transcription	Brain Anterior Caudate	brain
12	chr6:29913400-29932600	Weak transcription	Brain Substantia Nigra	brain
13	chr6:29913600-29918800	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr6:29913600-29919200	Weak transcription	HUES64 Cell Line	embryonic stem cell
15	chr6:29913600-29920400	Weak transcription	HMEC	breast
16	chr6:29913600-29921600	Weak transcription	NHEK	skin
17	chr6:29913600-29924400	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr6:29913600-29925400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr6:29913800-29921000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr6:29913800-29932200	Weak transcription	Small Intestine	intestine
21	chr6:29914000-29918200	Strong transcription	Rectal Mucosa Donor 29	rectum
22	chr6:29914000-29918200	Strong transcription	Thymus	Thymus
23	chr6:29914000-29920600	Weak transcription	NHLF	lung
24	chr6:29914000-29921000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr6:29914000-29923800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr6:29914000-29924200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
27	chr6:29914000-29932200	Weak transcription	Colon Smooth Muscle	Colon
28	chr6:29914200-29918200	Strong transcription	Primary monocytes fromperipheralblood	blood
29	chr6:29914200-29919000	Strong transcription	Primary B cells from cord blood	blood
30	chr6:29914200-29919200	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr6:29914200-29920800	Weak transcription	Cortex derived primary cultured neurospheres	brain
32	chr6:29914600-29920200	Weak transcription	Osteobl	bone
33	chr6:29914600-29932200	Weak transcription	Colonic Mucosa	Colon
34	chr6:29914800-29932200	Weak transcription	Right Ventricle	heart
35	chr6:29915200-29918400	Strong transcription	Primary neutrophils fromperipheralblood	blood
36	chr6:29915200-29920600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr6:29915400-29920400	Weak transcription	HSMM	muscle
38	chr6:29915400-29931800	Weak transcription	Fetal Thymus	thymus
39	chr6:29915600-29921000	Weak transcription	HSMMtube	muscle
40	chr6:29915600-29932000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
41	chr6:29915800-29918200	Strong transcription	Primary T cells from cord blood	blood
42	chr6:29915800-29920800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr6:29916400-29918400	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
44	chr6:29916400-29920800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
45	chr6:29916400-29926400	Weak transcription	GM12878-XiMat	blood
46	chr6:29916800-29918600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
47	chr6:29916800-29920400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
48	chr6:29916800-29921400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
49	chr6:29916800-29922200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr6:29916800-29924400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

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