Variant report

Variant	nsv464076
Chromosome Location	chr6:149755695-149798835
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:923)
CpG islands
(count:1100)
Chromatin interactive
region (count:30)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:923 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:149761833-149761881	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:149762478-149762931	HepG2	liver:	n/a	n/a
3	ATF2	chr6:149794137-149794625	GM12878	blood:	n/a	n/a
4	ATF2	chr6:149789927-149790416	GM12878	blood:	n/a	n/a
5	ATF2	chr6:149792855-149793395	GM12878	blood:	n/a	n/a
6	ATF2	chr6:149792810-149793813	GM12878	blood:	n/a	n/a
7	ATF2	chr6:149789899-149790409	GM12878	blood:	n/a	n/a
8	ATF2	chr6:149794115-149794595	GM12878	blood:	n/a	n/a
9	ATF3	chr6:149766740-149766941	K562	blood:	n/a	n/a
10	ATF3	chr6:149777942-149778134	K562	blood:	n/a	n/a
11	BACH1	chr6:149771870-149772280	H1-hESC	embryonic stem cell:	n/a	n/a
12	BATF	chr6:149759878-149760455	GM12878	blood:	n/a	n/a
13	BATF	chr6:149792984-149793324	GM12878	blood:	n/a	n/a
14	BATF	chr6:149760096-149760455	GM12878	blood:	n/a	n/a
15	BATF	chr6:149792884-149793330	GM12878	blood:	n/a	n/a
16	BATF	chr6:149789990-149790354	GM12878	blood:	n/a	n/a
17	BCL11A	chr6:149792950-149793283	GM12878	blood:	n/a	n/a
18	BCL11A	chr6:149789963-149790382	GM12878	blood:	n/a	n/a
19	BCL11A	chr6:149765256-149765749	GM12878	blood:	n/a	n/a
20	BCL11A	chr6:149792911-149793305	GM12878	blood:	n/a	n/a
21	BCL11A	chr6:149760019-149760454	GM12878	blood:	n/a	n/a
22	BCL3	chr6:149789909-149790414	GM12878	blood:	n/a	n/a
23	BCL3	chr6:149794083-149794603	GM12878	blood:	n/a	n/a
24	BCL3	chr6:149765582-149766061	GM12878	blood:	n/a	n/a
25	BCL3	chr6:149761942-149762469	GM12878	blood:	n/a	n/a
26	BCL3	chr6:149762178-149762410	GM12878	blood:	n/a	n/a
27	BCL3	chr6:149778683-149778929	GM12878	blood:	n/a	n/a
28	BCL3	chr6:149765589-149766196	GM12878	blood:	n/a	n/a
29	BCL3	chr6:149792891-149793836	GM12878	blood:	n/a	n/a
30	BCL3	chr6:149765027-149765359	GM12878	blood:	n/a	n/a
31	BCL3	chr6:149764924-149765402	GM12878	blood:	n/a	n/a
32	BCLAF1	chr6:149789706-149790418	GM12878	blood:	n/a	n/a
33	BCLAF1	chr6:149792820-149793613	GM12878	blood:	n/a	n/a
34	BCLAF1	chr6:149759965-149760388	GM12878	blood:	n/a	n/a
35	BCLAF1	chr6:149789876-149790420	GM12878	blood:	n/a	n/a
36	BHLHE40	chr6:149789510-149790348	GM12878	blood:	n/a	n/a
37	BHLHE40	chr6:149766729-149766965	K562	blood:	n/a	n/a
38	BHLHE40	chr6:149792963-149793836	GM12878	blood:	n/a	n/a
39	BHLHE40	chr6:149795810-149796105	GM12878	blood:	n/a	n/a
40	BHLHE40	chr6:149777820-149778360	K562	blood:	n/a	n/a
41	BHLHE40	chr6:149781060-149781226	K562	blood:	n/a	n/a
42	BHLHE40	chr6:149794142-149794667	GM12878	blood:	n/a	n/a
43	BHLHE40	chr6:149798743-149799014	GM12878	blood:	n/a	n/a
44	BHLHE40	chr6:149787532-149787791	GM12878	blood:	n/a	n/a
45	BHLHE40	chr6:149760223-149760371	GM12878	blood:	n/a	n/a
46	BHLHE40	chr6:149794270-149794969	HepG2	liver:	n/a	n/a
47	BRCA1	chr6:149771895-149772095	H1-hESC	embryonic stem cell:	n/a	n/a
48	BRCA1	chr6:149775357-149776029	Hela-S3	cervix:	n/a	n/a
49	BRCA1	chr6:149794353-149794855	Hela-S3	cervix:	n/a	n/a
50	BRCA1	chr6:149789960-149790105	GM12878	blood:	n/a	n/a

(count:1100 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:149778058-149778108	GM19239	blood:	n/a
2	chr6:149775853-149775903	GM12891	blood:	n/a
3	chr6:149778058-149778108	GM19239	blood:	n/a
4	chr6:149775853-149775903	GM12891	blood:	n/a
5	chr6:149769803-149769853	AG09319	gingival:	n/a
6	chr6:149772854-149772904	HCF	heart:	n/a
7	chr6:149775621-149775671	HCM	heart:	n/a
8	chr6:149781248-149781298	HCT-116	colon:	n/a
9	chr6:149777984-149778034	T-47D	breast:	n/a
10	chr6:149769803-149769853	NHBE	bronchial:	n/a
11	chr6:149771845-149771895	HIPEpiC	eye:	n/a
12	chr6:149775621-149775671	HAEpiC	amniotic membrane:	n/a
13	chr6:149785754-149785804	NT2-D1	testis:	n/a
14	chr6:149772892-149772942	NHDF-neo	bronchial:	n/a
15	chr6:149775853-149775903	PFSK-1	brain:	n/a
16	chr6:149769803-149769853	HRPEpiC	eye:	n/a
17	chr6:149775621-149775671	HRE	kidney:	n/a
18	chr6:149770103-149770153	Caco-2	colon:	n/a
19	chr6:149778058-149778108	HMEC	breast:	n/a
20	chr6:149772150-149772200	HIPEpiC	eye:	n/a
21	chr6:149772150-149772200	HRCEpiC	kidney:	n/a
22	chr6:149771807-149771857	BJ	skin:	n/a
23	chr6:149775853-149775903	Hela-S3	cervix:	n/a
24	chr6:149777806-149777856	AG10803	skin:	n/a
25	chr6:149772854-149772904	HepG2	liver:	n/a
26	chr6:149772892-149772942	ProgFib	skin:	n/a
27	chr6:149775853-149775903	HCT-116	colon:	n/a
28	chr6:149778775-149778825	BJ	skin:	n/a
29	chr6:149772707-149772757	GM12878	blood:	n/a
30	chr6:149769803-149769853	PFSK-1	brain:	n/a
31	chr6:149777806-149777856	A549	lung:	n/a
32	chr6:149778058-149778108	Hepatocyte	liver:	n/a
33	chr6:149772346-149772396	HMEC	breast:	n/a
34	chr6:149772150-149772200	RPTEC	kidney:	n/a
35	chr6:149769803-149769853	ovcar-3	ovarian:	n/a
36	chr6:149777806-149777856	CMK	blood:	n/a
37	chr6:149771845-149771895	RPTEC	kidney:	n/a
38	chr6:149770103-149770153	SK-N-SH	brain:	n/a
39	chr6:149778775-149778825	Caco-2	colon:	n/a
40	chr6:149771807-149771857	HEEpiC	esophagus:	n/a
41	chr6:149778775-149778825	PANC-1	pancreas:	n/a
42	chr6:149772346-149772396	ECC-1	luminal epithelium:	n/a
43	chr6:149772892-149772942	GM19239	blood:	n/a
44	chr6:149781248-149781298	H1-hESC	embryonic stem cell:	embryo
45	chr6:149775853-149775903	HUVEC	blood vessel:	n/a
46	chr6:149770103-149770153	NH-A	brain:	n/a
47	chr6:149785754-149785804	ECC-1	luminal epithelium:	n/a
48	chr6:149772150-149772200	HRPEpiC	eye:	n/a
49	chr6:149772892-149772942	T-47D	breast:	n/a
50	chr6:149785754-149785804	GM06990	blood:	n/a

(count:30 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:149785728..149788361-chr6:149790642..149793612,2	K562	blood:
2	chr6:149764839..149766396-chr6:149774052..149775951,2	MCF-7	breast:
3	chr6:149398184..149404330-chr6:149748783..149757211,17	MCF-7	breast:
4	chr6:149779659..149781916-chr6:149782862..149785427,2	K562	blood:
5	chr6:149352642..149354997-chr6:149758061..149760104,2	MCF-7	breast:
6	chr6:149767445..149770252-chr6:149772541..149774258,2	MCF-7	breast:
7	chr6:149769726..149773853-chr6:149775332..149778151,3	K562	blood:
8	chr6:149757368..149759713-chr6:149765073..149766703,2	K562	blood:
9	chr6:149353960..149356786-chr6:149766378..149768113,2	MCF-7	breast:
10	chr6:149757368..149759713-chr6:149765073..149766703,2	K562	blood:
11	chr6:149798641..149801260-chr6:149810434..149812141,2	K562	blood:
12	chr6:149795137..149796969-chr6:149800706..149802832,2	K562	blood:
13	chr6:149764839..149766396-chr6:149774052..149775951,2	MCF-7	breast:
14	chr6:149637666..149639444-chr6:149793847..149796038,2	K562	blood:
15	chr6:149749032..149751401-chr6:149754918..149757804,2	K562	blood:
16	chr6:149767445..149770252-chr6:149772541..149774258,2	MCF-7	breast:
17	chr6:149792520..149794344-chr6:149794518..149797030,2	K562	blood:
18	chr6:149795286..149796796-chr6:149799603..149801991,2	MCF-7	breast:
19	chr6:149769726..149773853-chr6:149775332..149778151,3	K562	blood:
20	chr6:149785728..149788361-chr6:149790642..149793612,2	K562	blood:
21	chr6:149750637..149752761-chr6:149774465..149776310,2	MCF-7	breast:
22	chr6:149399709..149402380-chr6:149772394..149774498,2	K562	blood:
23	chr6:149763441..149766003-chr6:149768583..149771236,2	K562	blood:
24	chr6:149762143..149764363-chr6:149765543..149768268,2	K562	blood:
25	chr6:149763379..149766103-chr6:149776553..149779366,2	MCF-7	breast:
26	chr6:149762143..149764363-chr6:149765543..149768268,2	K562	blood:
27	chr6:149763319..149765484-chr6:149839894..149842239,2	MCF-7	breast:
28	chr6:149792520..149794344-chr6:149794518..149797030,2	K562	blood:
29	chr6:149351119..149355583-chr6:149748923..149756337,13	MCF-7	breast:
30	chr6:149779659..149781916-chr6:149782862..149785427,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZC3H12D-9	chr6:149768794-149769181	NONHSAT115500
2	lnc-ZC3H12D-9	chr6:149769570-149770516	NONHSAT115500

No data

Variant related genes	Relation type
ZC3H12D	TF binding region
ZC3H12D	CpG island
ENSG00000055208	chromatin interactions
ENSG00000178199	chromatin interactions
ENSG00000236591	chromatin interactions

Extended variants
information (count: 1839 )
Associated
traits (count: 85 )

Variant overlapped rSNPs/rCNVs (count:1839 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2153219	chr6:149755695-149755696	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs79213304	chr6:149755705-149755706	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs148763487	chr6:149755710-149755711	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs11967660	chr6:149755721-149755722	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs760897	chr6:149755726-149755727	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs529099113	chr6:149755731-149755732	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs553189727	chr6:149755764-149755765	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs141470894	chr6:149755784-149755785	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs377217245	chr6:149755809-149755810	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs150840822	chr6:149755882-149755883	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs237001	chr6:149755883-149755884	Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs570950920	chr6:149755886-149755887	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs369987187	chr6:149755910-149755911	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs539893282	chr6:149755933-149755934	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs553524307	chr6:149755967-149755968	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs184823871	chr6:149755971-149755972	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs189434724	chr6:149755972-149755973	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs558373005	chr6:149755973-149755974	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs556003383	chr6:149756036-149756037	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs145348074	chr6:149756107-149756108	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs113582222	chr6:149756112-149756113	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs544185277	chr6:149756126-149756127	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs563699322	chr6:149756139-149756140	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs532769993	chr6:149756156-149756157	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs374956625	chr6:149756182-149756183	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs539912910	chr6:149756194-149756195	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs76336446	chr6:149756216-149756217	Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs9498349	chr6:149756355-149756356	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs548937042	chr6:149756362-149756363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs543882844	chr6:149756370-149756371	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs569131794	chr6:149756374-149756375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs545811032	chr6:149756382-149756383	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs147648694	chr6:149756417-149756418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs140592220	chr6:149756475-149756476	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs11759876	chr6:149756536-149756537	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs570828993	chr6:149756590-149756591	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs539854541	chr6:149756596-149756597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs372850847	chr6:149756640-149756641	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs553485667	chr6:149756684-149756685	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs368822360	chr6:149756687-149756688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs566999255	chr6:149756717-149756718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs559611362	chr6:149756727-149756728	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs237000	chr6:149756739-149756740	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs181350190	chr6:149756745-149756746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs575804225	chr6:149756778-149756779	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs548377412	chr6:149756780-149756781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs538110842	chr6:149756821-149756822	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs2789493	chr6:149756862-149756863	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs577183741	chr6:149756885-149756886	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs145575393	chr6:149756886-149756887	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:85)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Autism	22495311	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Malignant melanoma	17260012	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Soft tissue tumor	16732325	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
Cancer	17160897	CNVD
Breast cancer	17417639	CNVD
Breast cancer	17850661	CNVD
Renal cell carcinoma	18765545	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Ovarian neoplasms	16753589	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20556506	CNVD
Hirschsprung''s Disease	21712996	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1218 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:149746800-149762000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:149749800-149764400	Weak transcription	Right Atrium	heart
3	chr6:149753400-149756800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:149753400-149762200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr6:149753400-149762800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr6:149753400-149770000	Weak transcription	Primary T helper cells fromperipheralblood	blood
7	chr6:149753600-149758200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr6:149753600-149762200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr6:149753600-149768400	Weak transcription	Primary T helper cells PMA-I stimulated	--
10	chr6:149753600-149769600	Weak transcription	Primary B cells from peripheral blood	blood
11	chr6:149753800-149755800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr6:149753800-149755800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr6:149753800-149755800	Enhancers	Osteobl	bone
14	chr6:149754400-149761800	Weak transcription	Fetal Thymus	thymus
15	chr6:149755400-149755800	Enhancers	Ovary	ovary
16	chr6:149755600-149757000	Weak transcription	Fetal Lung	lung
17	chr6:149756800-149757000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
18	chr6:149757000-149761800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr6:149758200-149758600	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
20	chr6:149758600-149758800	Enhancers	GM12878-XiMat	blood
21	chr6:149758800-149759800	Weak transcription	GM12878-XiMat	blood
22	chr6:149759800-149760800	Enhancers	GM12878-XiMat	blood
23	chr6:149760200-149760600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr6:149760600-149762200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
25	chr6:149760600-149766600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
26	chr6:149760800-149761200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr6:149760800-149765800	Weak transcription	GM12878-XiMat	blood
28	chr6:149761000-149761200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
29	chr6:149761000-149761200	Enhancers	HSMM	muscle
30	chr6:149761200-149762400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
31	chr6:149761600-149762000	Enhancers	HepG2	liver
32	chr6:149761600-149769600	Weak transcription	Primary B cells from cord blood	blood
33	chr6:149761800-149762800	Enhancers	Fetal Thymus	thymus
34	chr6:149761800-149763200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr6:149761800-149763200	Enhancers	Fetal Intestine Small	intestine
36	chr6:149762000-149762200	Flanking Active TSS	HepG2	liver
37	chr6:149762000-149762600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
38	chr6:149762000-149762600	Enhancers	Primary hematopoietic stem cells short term culture	blood
39	chr6:149762000-149762800	Enhancers	Hela-S3	cervix
40	chr6:149762000-149763000	Bivalent Enhancer	Fetal Muscle Leg	muscle
41	chr6:149762000-149763200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr6:149762000-149763200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
43	chr6:149762000-149763200	Enhancers	Fetal Intestine Large	intestine
44	chr6:149762000-149763200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
45	chr6:149762000-149763600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr6:149762200-149762400	Enhancers	ES-I3 Cell Line	embryonic stem cell
47	chr6:149762200-149762400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr6:149762200-149762600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr6:149762200-149762600	Flanking Bivalent TSS/Enh	HepG2	liver
50	chr6:149762200-149762600	Enhancers	NH-A	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links