Variant report

Variant	nsv464099
Chromosome Location	chr6:162691418-163015279
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:162857639-162857816	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:162910482-162910786	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:162794306-162794665	HepG2	liver:	n/a	n/a
4	ATF1	chr6:162812647-162812847	K562	blood:	n/a	n/a
5	ATF1	chr6:162784797-162785113	K562	blood:	n/a	n/a
6	ATF1	chr6:162812215-162812339	K562	blood:	n/a	n/a
7	ATF1	chr6:162782228-162782581	K562	blood:	n/a	n/a
8	ATF3	chr6:162784742-162785052	K562	blood:	n/a	n/a
9	BACH1	chr6:162975725-162976098	K562	blood:	n/a	n/a
10	BHLHE40	chr6:162899266-162899534	GM12878	blood:	n/a	n/a
11	BRCA1	chr6:162871740-162871751	H1-hESC	embryonic stem cell:	n/a	n/a
12	CBX3	chr6:162784775-162785143	K562	blood:	n/a	n/a
13	CBX3	chr6:162785538-162785848	K562	blood:	n/a	n/a
14	CCNT2	chr6:163001825-163002025	K562	blood:	n/a	n/a
15	CEBPB	chr6:162861366-162861450	H1-hESC	embryonic stem cell:	n/a	chr6:162861390-162861403
16	CEBPB	chr6:162871443-162871750	MCF-7	breast:	n/a	chr6:162871605-162871616
17	CEBPB	chr6:162784733-162785018	K562	blood:	n/a	n/a
18	CEBPB	chr6:162839236-162839248	A549	lung:	n/a	n/a
19	CEBPB	chr6:162784761-162785142	K562	blood:	n/a	chr6:162785029-162785040
20	CEBPB	chr6:162857234-162857635	HepG2	liver:	n/a	chr6:162857420-162857431
21	CEBPB	chr6:162910493-162910789	HepG2	liver:	n/a	n/a
22	CEBPB	chr6:162857291-162857590	HepG2	liver:	n/a	chr6:162857420-162857431
23	CEBPB	chr6:162868765-162868950	HepG2	liver:	n/a	chr6:162868884-162868895
24	CEBPB	chr6:162784873-162785124	H1-hESC	embryonic stem cell:	n/a	chr6:162785029-162785040
25	CEBPB	chr6:162871429-162871791	HepG2	liver:	n/a	chr6:162871605-162871616
26	CEBPB	chr6:162766335-162766614	A549	lung:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
27	CEBPB	chr6:162857280-162857594	HepG2	liver:	n/a	chr6:162857420-162857431
28	CEBPB	chr6:162876192-162876578	MCF-7	breast:	n/a	n/a
29	CEBPB	chr6:162939387-162939585	HepG2	liver:	n/a	chr6:162939453-162939464
30	CEBPB	chr6:162766332-162766577	H1-hESC	embryonic stem cell:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
31	CEBPB	chr6:162943679-162943865	HepG2	liver:	n/a	n/a
32	CEBPB	chr6:162910422-162910805	HepG2	liver:	n/a	n/a
33	CEBPB	chr6:162825981-162826255	HepG2	liver:	n/a	chr6:162826093-162826104
34	CEBPB	chr6:162961979-162962215	HepG2	liver:	n/a	chr6:162962080-162962091
35	CEBPB	chr6:162794250-162794499	HepG2	liver:	n/a	chr6:162794312-162794323
36	CEBPB	chr6:162896813-162896974	HepG2	liver:	n/a	chr6:162896839-162896850
37	CEBPB	chr6:162857299-162857541	HepG2	liver:	n/a	chr6:162857420-162857431
38	CEBPB	chr6:162784839-162785153	HepG2	liver:	n/a	chr6:162785029-162785040
39	CEBPB	chr6:162766327-162766640	HepG2	liver:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
40	CEBPB	chr6:162726891-162727117	HepG2	liver:	n/a	chr6:162726998-162727009 chr6:162726998-162727011 chr6:162727074-162727083 chr6:162727018-162727029 chr6:162727072-162727085
41	CEBPB	chr6:162766353-162766628	IMR90	lung:	n/a	chr6:162766482-162766491 chr6:162766482-162766491 chr6:162766481-162766492 chr6:162766482-162766491 chr6:162766480-162766491 chr6:162766482-162766491 chr6:162766480-162766493
42	CEBPB	chr6:162745722-162745922	HepG2	liver:	n/a	chr6:162745751-162745762
43	CEBPB	chr6:162871405-162871712	H1-hESC	embryonic stem cell:	n/a	chr6:162871605-162871616
44	CEBPB	chr6:162910460-162910714	HepG2	liver:	n/a	n/a
45	CEBPB	chr6:162876249-162876534	IMR90	lung:	n/a	n/a
46	CEBPB	chr6:162944101-162944302	HepG2	liver:	n/a	n/a
47	CEBPB	chr6:162779025-162779284	HepG2	liver:	n/a	chr6:162779118-162779129
48	CEBPB	chr6:162775249-162775526	HepG2	liver:	n/a	chr6:162775385-162775396
49	CEBPB	chr6:162871496-162871684	HepG2	liver:	n/a	chr6:162871605-162871616
50	CEBPB	chr6:162779076-162779247	A549	lung:	n/a	chr6:162779118-162779129

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:162863505-162863555	ProgFib	skin:	n/a
2	chr6:162863505-162863555	ProgFib	skin:	n/a
3	chr6:162864586-162864636	NH-A	brain:	n/a
4	chr6:162865258-162865308	Caco-2	colon:	n/a
5	chr6:162864586-162864636	K562	blood:	n/a
6	chr6:162964378-162964428	GM12891	blood:	n/a
7	chr6:162864586-162864636	ovcar-3	ovarian:	n/a
8	chr6:162863505-162863555	HEK293	kidney:	embryo
9	chr6:162864586-162864636	HCPEpiC	choroid plexus:	n/a
10	chr6:162831837-162831887	AG04449	skin:	fetal
11	chr6:162865258-162865308	HRCEpiC	kidney:	n/a
12	chr6:162864586-162864636	SAEC	small airway:	n/a
13	chr6:162865171-162865221	HCT-116	colon:	n/a
14	chr6:162864586-162864636	Hepatocyte	liver:	n/a
15	chr6:162865171-162865221	HUVEC	blood vessel:	n/a
16	chr6:162863505-162863555	ECC-1	luminal epithelium:	n/a
17	chr6:162865171-162865221	T-47D	breast:	n/a
18	chr6:162964378-162964428	Hela-S3	cervix:	n/a
19	chr6:162964378-162964428	NT2-D1	testis:	n/a
20	chr6:162864586-162864636	PANC-1	pancreas:	n/a
21	chr6:162831837-162831887	PFSK-1	brain:	n/a
22	chr6:162864586-162864636	HMEC	breast:	n/a
23	chr6:162865258-162865308	AoSMC	blood vessel:	n/a
24	chr6:162863505-162863555	MCF-7	breast:	n/a
25	chr6:162865258-162865308	PrEC	prostate:	n/a
26	chr6:162863505-162863555	HCF	heart:	n/a
27	chr6:162865258-162865308	ECC-1	luminal epithelium:	n/a
28	chr6:162864586-162864636	HEK293	kidney:	embryo
29	chr6:162964378-162964428	HRCEpiC	kidney:	n/a
30	chr6:162864586-162864636	HRCEpiC	kidney:	n/a
31	chr6:162831837-162831887	HEEpiC	esophagus:	n/a
32	chr6:162964378-162964428	Hepatocyte	liver:	n/a
33	chr6:162964378-162964428	ovcar-3	ovarian:	n/a
34	chr6:162831837-162831887	PrEC	prostate:	n/a
35	chr6:162831837-162831887	SKMC	muscle:	n/a
36	chr6:162964378-162964428	SK-N-SH	brain:	n/a
37	chr6:162863505-162863555	GM12878	blood:	n/a
38	chr6:162865171-162865221	Jurkat	blood:	n/a
39	chr6:162863505-162863555	AG04450	lung:	fetal
40	chr6:162865258-162865308	HUVEC	blood vessel:	n/a
41	chr6:162964378-162964428	RPTEC	kidney:	n/a
42	chr6:162865258-162865308	SK-N-MC	brain:	n/a
43	chr6:162964378-162964428	AoSMC	blood vessel:	n/a
44	chr6:162964378-162964428	HCM	heart:	n/a
45	chr6:162865258-162865308	LNCaP	prostate:	n/a
46	chr6:162865258-162865308	ovcar-3	ovarian:	n/a
47	chr6:162864586-162864636	AG10803	skin:	n/a
48	chr6:162831837-162831887	SAEC	small airway:	n/a
49	chr6:162865258-162865308	SAEC	small airway:	n/a
50	chr6:162865258-162865308	GM19239	blood:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:162768506..162770213-chr6:162786241..162788330,2	K562	blood:
2	chr6:162799485..162803733-chr6:162804296..162807777,5	K562	blood:
3	chr6:162820265..162823089-chr6:162827852..162829559,2	K562	blood:
4	chr6:162721411..162723925-chr6:162726328..162729326,2	K562	blood:
5	chr6:162671180..162673472-chr6:162808694..162811227,2	K562	blood:
6	chr6:162799485..162803733-chr6:162804296..162807777,5	K562	blood:
7	chr6:162863367..162864320-chr6:163157771..163158572,4	MCF-7	breast:
8	chr6:162960178..162962006-chr6:162962880..162965078,2	K562	blood:
9	chr6:162820265..162823089-chr6:162827852..162829559,2	K562	blood:
10	chr6:162902802..162905070-chr6:162905406..162907332,2	K562	blood:
11	chr6:162768506..162770213-chr6:162786241..162788330,2	K562	blood:
12	chr6:162721411..162723925-chr6:162726328..162729326,2	K562	blood:
13	chr6:162902802..162905070-chr6:162905406..162907332,2	K562	blood:
14	chr6:162960178..162962006-chr6:162962880..162965078,2	K562	blood:
15	chr6:162763017..162765353-chr6:162767098..162769301,2	K562	blood:
16	chr6:162863816..162864618-chr6:163271757..163272511,2	MCF-7	breast:
17	chr6:162763017..162765353-chr6:162767098..162769301,2	K562	blood:
18	chr6:163002877..163005708-chr6:163021910..163024946,3	K562	blood:

Variant related genes	Relation type
KRT8P44	TF binding region
KRT8P44	CpG island

Extended variants
information (count: 13617 )
Associated
traits (count: 102 )

Variant overlapped rSNPs/rCNVs (count:13617 , 50 per page) page: 1 2 3 4 5 6 7 ... 273

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11966606	chr6:162691418-162691419	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs556445936	chr6:162691442-162691443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs148683528	chr6:162691454-162691455	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs143184838	chr6:162691496-162691497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs548324818	chr6:162691504-162691505	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs568267048	chr6:162691505-162691506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs564307652	chr6:162691538-162691539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs527552731	chr6:162691551-162691552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs375844328	chr6:162691557-162691558	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs547275000	chr6:162691558-162691559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs386708040	chr6:162691571-162691572	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs370634607	chr6:162691572-162691573	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs552430951	chr6:162691583-162691584	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs569296432	chr6:162691642-162691643	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs188091722	chr6:162691644-162691645	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs540820425	chr6:162691648-162691649	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs575049072	chr6:162691649-162691650	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs180729818	chr6:162691668-162691669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs554481531	chr6:162691758-162691759	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201481678	chr6:162691791-162691792	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs112970611	chr6:162691864-162691865	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs576958592	chr6:162691891-162691892	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs77218354	chr6:162691970-162691971	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs548203512	chr6:162692006-162692007	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs562452854	chr6:162692017-162692018	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs184861617	chr6:162692023-162692024	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs189693076	chr6:162692033-162692034	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs376274610	chr6:162692049-162692050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs541679382	chr6:162692055-162692056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs61368267	chr6:162692069-162692070	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs28454830	chr6:162692084-162692085	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs28481618	chr6:162692086-162692087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs6939604	chr6:162692108-162692109	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs527462044	chr6:162692138-162692139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs547334339	chr6:162692188-162692189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs564030900	chr6:162692199-162692200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs369181966	chr6:162692234-162692235	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs181885491	chr6:162692267-162692268	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs552499914	chr6:162692284-162692285	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs113216267	chr6:162692313-162692314	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs538305157	chr6:162692397-162692398	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs371143134	chr6:162692456-162692457	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs568697310	chr6:162692459-162692460	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs146675979	chr6:162692461-162692462	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs534386527	chr6:162692493-162692494	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs554542908	chr6:162692530-162692531	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs186956720	chr6:162692561-162692562	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs548309891	chr6:162692564-162692565	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs533831414	chr6:162692568-162692569	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs6912294	chr6:162692570-162692571	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:102)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
Renal cell carcinoma	18592004	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Developmental delay	21147756	CNVD
Chordoma	18071362	CNVD
Myelofibrosis	22110671	CNVD
Autism	22241247	CNVD
Breast cancer	16397240	CNVD
Atherosclerosis	21956041	CNVD
Maculopathy	20981449	CNVD
Retinoblastoma	22278416	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Ovarian cancer	20844748	CNVD
Uveal melanoma	20484589	CNVD
Glioblastoma multiforme	19435819	CNVD
Astrocytoma	16205629	CNVD
Parkinson disease	17160897	CNVD
Cancer	20164920	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	20838587	CNVD
Early-onset parkinson disease	21993715	CNVD
Glioblastoma	18772890	CNVD
Pancreatic cancer	20981101	CNVD
Autism	21360662	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Parkinson disease	0	CNVD
Cancer	20164919	CNVD
Ovarian cancer	21720365	CNVD
Schizophrenia	20967226	CNVD
Attention deficit hyperactivity disorder	19546859	CNVD
Autism	22495309	CNVD
Glioblastoma multiforme	21138945	CNVD
Ovarian cancer	22355333	CNVD
Schizophrenia	19805367	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Schizophrenia	21346763	CNVD

Chromatin state (count:1097 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:162674000-162694600	Weak transcription	Aorta	Aorta
2	chr6:162677800-162705400	Weak transcription	Pancreas	Pancrea
3	chr6:162688400-162693000	Weak transcription	Ovary	ovary
4	chr6:162692200-162693200	Enhancers	Fetal Muscle Leg	muscle
5	chr6:162697400-162699800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr6:162698600-162699800	Enhancers	Fetal Heart	heart
7	chr6:162702600-162703000	Weak transcription	Left Ventricle	heart
8	chr6:162702800-162703200	Enhancers	Brain Substantia Nigra	brain
9	chr6:162703000-162703200	Enhancers	Left Ventricle	heart
10	chr6:162705400-162706200	Enhancers	Pancreas	Pancrea
11	chr6:162705600-162706000	Enhancers	HepG2	liver
12	chr6:162705800-162706000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr6:162708800-162709000	Enhancers	Fetal Muscle Trunk	muscle
14	chr6:162708800-162711400	Enhancers	Fetal Muscle Leg	muscle
15	chr6:162709000-162714400	Weak transcription	Fetal Muscle Trunk	muscle
16	chr6:162709800-162710400	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr6:162710000-162711600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr6:162710000-162712400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
19	chr6:162710200-162710800	Enhancers	Brain Substantia Nigra	brain
20	chr6:162710400-162719200	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr6:162710600-162710800	Enhancers	Brain Cingulate Gyrus	brain
22	chr6:162710600-162711800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
23	chr6:162710600-162712400	Enhancers	Cortex derived primary cultured neurospheres	brain
24	chr6:162710800-162711000	Flanking Active TSS	Brain Hippocampus Middle	brain
25	chr6:162710800-162711000	Enhancers	Psoas Muscle	Psoas
26	chr6:162710800-162711000	Enhancers	Right Atrium	heart
27	chr6:162710800-162711000	Enhancers	Right Ventricle	heart
28	chr6:162710800-162711200	Active TSS	Brain Anterior Caudate	brain
29	chr6:162710800-162711200	Flanking Active TSS	Brain Cingulate Gyrus	brain
30	chr6:162710800-162711200	Enhancers	Brain Inferior Temporal Lobe	brain
31	chr6:162710800-162711400	Enhancers	Brain Angular Gyrus	brain
32	chr6:162710800-162711400	Flanking Active TSS	Brain Substantia Nigra	brain
33	chr6:162710800-162712400	Enhancers	Rectal Smooth Muscle	rectum
34	chr6:162711000-162711200	Active TSS	Brain Hippocampus Middle	brain
35	chr6:162711000-162711200	Enhancers	Duodenum Smooth Muscle	Duodenum
36	chr6:162711000-162711400	Enhancers	Fetal Kidney	kidney
37	chr6:162711000-162712200	Weak transcription	Right Atrium	heart
38	chr6:162711000-162712600	Enhancers	Fetal Lung	lung
39	chr6:162711000-162714600	Weak transcription	Right Ventricle	heart
40	chr6:162711200-162711400	Flanking Active TSS	Brain Hippocampus Middle	brain
41	chr6:162711200-162711400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
42	chr6:162711200-162712200	Weak transcription	Psoas Muscle	Psoas
43	chr6:162711200-162712400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
44	chr6:162711200-162712400	Enhancers	Brain Anterior Caudate	brain
45	chr6:162711200-162712400	Enhancers	Brain Cingulate Gyrus	brain
46	chr6:162711200-162713200	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr6:162711400-162711800	Weak transcription	Brain Angular Gyrus	brain
48	chr6:162711400-162712200	Enhancers	Brain Hippocampus Middle	brain
49	chr6:162711400-162712200	Enhancers	Brain Inferior Temporal Lobe	brain
50	chr6:162711400-162712400	Enhancers	Brain Substantia Nigra	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links