Variant report

Variant	nsv466071
Chromosome Location	chr9:2028757-2065892
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:446)
CpG islands
(count:366)
Chromatin interactive
region (count:26)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:446 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr9:2054946-2055805	GM12878	blood:	n/a	n/a
2	ATF2	chr9:2053700-2054321	GM12878	blood:	n/a	n/a
3	ATF2	chr9:2043068-2043725	GM12878	blood:	n/a	n/a
4	ATF2	chr9:2055011-2055808	GM12878	blood:	n/a	n/a
5	ATF2	chr9:2043092-2043667	GM12878	blood:	n/a	n/a
6	ATF2	chr9:2053653-2054478	GM12878	blood:	n/a	n/a
7	BATF	chr9:2055036-2055733	GM12878	blood:	n/a	chr9:2055534-2055544
8	BATF	chr9:2055078-2055684	GM12878	blood:	n/a	chr9:2055534-2055544
9	BATF	chr9:2043270-2043543	GM12878	blood:	n/a	n/a
10	BATF	chr9:2043195-2043566	GM12878	blood:	n/a	n/a
11	BATF	chr9:2053830-2054274	GM12878	blood:	n/a	n/a
12	BCL11A	chr9:2059398-2059873	GM12878	blood:	n/a	n/a
13	BCL11A	chr9:2053878-2054277	GM12878	blood:	n/a	n/a
14	BCL11A	chr9:2055123-2055702	GM12878	blood:	n/a	n/a
15	BCL11A	chr9:2055057-2055743	GM12878	blood:	n/a	n/a
16	BCL11A	chr9:2053866-2054307	GM12878	blood:	n/a	n/a
17	BCL3	chr9:2055084-2055684	GM12878	blood:	n/a	n/a
18	BCL3	chr9:2053747-2054301	GM12878	blood:	n/a	n/a
19	BCLAF1	chr9:2053364-2054381	GM12878	blood:	n/a	n/a
20	BCLAF1	chr9:2055206-2055756	GM12878	blood:	n/a	n/a
21	BCLAF1	chr9:2053773-2054316	GM12878	blood:	n/a	n/a
22	BCLAF1	chr9:2043238-2043879	GM12878	blood:	n/a	chr9:2043484-2043493
23	BCLAF1	chr9:2043986-2044753	GM12878	blood:	n/a	n/a
24	BHLHE40	chr9:2053738-2054542	GM12878	blood:	n/a	n/a
25	CEBPB	chr9:2054991-2055898	GM12878	blood:	n/a	n/a
26	CEBPB	chr9:2053906-2054237	GM12878	blood:	n/a	n/a
27	CEBPB	chr9:2055286-2055624	IMR90	lung:	n/a	n/a
28	CEBPB	chr9:2032241-2032421	IMR90	lung:	n/a	chr9:2032242-2032253 chr9:2032242-2032253
29	CEBPB	chr9:2032166-2032576	K562	blood:	n/a	chr9:2032242-2032253 chr9:2032242-2032253
30	CEBPB	chr9:2051511-2051590	H1-hESC	embryonic stem cell:	n/a	n/a
31	CHD2	chr9:2053800-2054488	GM12878	blood:	n/a	n/a
32	CREB1	chr9:2053718-2054421	GM12878	blood:	n/a	n/a
33	CREB1	chr9:2053767-2054383	GM12878	blood:	n/a	n/a
34	CTCF	chr9:2055440-2055590	HMF	breast:	n/a	n/a
35	CTCF	chr9:2044480-2044630	AG09309	skin:	n/a	n/a
36	CTCF	chr9:2053220-2053370	AG09309	skin:	n/a	n/a
37	CTCF	chr9:2032946-2033014	LNCaP	prostate:	n/a	n/a
38	CTCF	chr9:2059640-2059840	GM12878	blood:	n/a	n/a
39	CUX1	chr9:2053708-2054248	GM12878	blood:	n/a	n/a
40	CUX1	chr9:2055112-2055648	GM12878	blood:	n/a	chr9:2055237-2055253
41	CUX1	chr9:2043289-2043642	GM12878	blood:	n/a	n/a
42	CUX1	chr9:2059432-2059805	GM12878	blood:	n/a	n/a
43	E2F4	chr9:2062381-2062574	MCF10A-Er-Src	breast:	n/a	n/a
44	E2F4	chr9:2055400-2055752	MCF10A-Er-Src	breast:	n/a	n/a
45	E2F4	chr9:2050399-2050457	MCF10A-Er-Src	breast:	n/a	n/a
46	EBF1	chr9:2053807-2054387	GM12878	blood:	n/a	n/a
47	EBF1	chr9:2053849-2054258	GM12878	blood:	n/a	n/a
48	EBF1	chr9:2055260-2055660	GM12878	blood:	n/a	n/a
49	EBF1	chr9:2038293-2038642	GM12878	blood:	n/a	chr9:2038464-2038475
50	EBF1	chr9:2038330-2038633	GM12878	blood:	n/a	chr9:2038464-2038475

(count:366 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:2047800-2047850	AG04449	skin:	fetal
2	chr9:2047373-2047423	HepG2	liver:	n/a
3	chr9:2044055-2044105	NH-A	brain:	n/a
4	chr9:2047595-2047645	HUVEC	blood vessel:	n/a
5	chr9:2050899-2050949	Caco-2	colon:	n/a
6	chr9:2044055-2044105	GM06990	blood:	n/a
7	chr9:2050899-2050949	HL-60	blood:	n/a
8	chr9:2047160-2047210	ECC-1	luminal epithelium:	n/a
9	chr9:2050899-2050949	HCM	heart:	n/a
10	chr9:2047595-2047645	SAEC	small airway:	n/a
11	chr9:2044055-2044105	NHDF-neo	bronchial:	n/a
12	chr9:2047800-2047850	ECC-1	luminal epithelium:	n/a
13	chr9:2047800-2047850	SK-N-SH	brain:	n/a
14	chr9:2047800-2047850	Caco-2	colon:	n/a
15	chr9:2047595-2047645	HEK293	kidney:	embryo
16	chr9:2044055-2044105	HCT-116	colon:	n/a
17	chr9:2044055-2044105	AG04449	skin:	fetal
18	chr9:2047800-2047850	HMEC	breast:	n/a
19	chr9:2047800-2047850	AG04450	lung:	fetal
20	chr9:2050899-2050949	H1-hESC	embryonic stem cell:	embryo
21	chr9:2050899-2050949	GM12891	blood:	n/a
22	chr9:2047160-2047210	RPTEC	kidney:	n/a
23	chr9:2050899-2050949	HRPEpiC	eye:	n/a
24	chr9:2047160-2047210	GM12891	blood:	n/a
25	chr9:2050899-2050949	IMR90	lung:	fetal
26	chr9:2047800-2047850	HRCEpiC	kidney:	n/a
27	chr9:2050899-2050949	HIPEpiC	eye:	n/a
28	chr9:2044055-2044105	GM12892	blood:	n/a
29	chr9:2050899-2050949	MCF10A-Er-Src	breast:	n/a
30	chr9:2047160-2047210	HUVEC	blood vessel:	n/a
31	chr9:2047800-2047850	BE2_C	brain:	n/a
32	chr9:2047373-2047423	NHDF-neo	bronchial:	n/a
33	chr9:2047595-2047645	AoSMC	blood vessel:	n/a
34	chr9:2047160-2047210	GM12878	blood:	n/a
35	chr9:2047595-2047645	K562	blood:	n/a
36	chr9:2047595-2047645	AG04450	lung:	fetal
37	chr9:2047373-2047423	NHBE	bronchial:	n/a
38	chr9:2050899-2050949	AG10803	skin:	n/a
39	chr9:2050899-2050949	AG04450	lung:	fetal
40	chr9:2050899-2050949	HCPEpiC	choroid plexus:	n/a
41	chr9:2047800-2047850	H1-hESC	embryonic stem cell:	embryo
42	chr9:2047800-2047850	CMK	blood:	n/a
43	chr9:2047373-2047423	CMK	blood:	n/a
44	chr9:2047800-2047850	BJ	skin:	n/a
45	chr9:2044055-2044105	HMEC	breast:	n/a
46	chr9:2047595-2047645	PANC-1	pancreas:	n/a
47	chr9:2047160-2047210	HEEpiC	esophagus:	n/a
48	chr9:2047160-2047210	SKMC	muscle:	n/a
49	chr9:2047800-2047850	AoSMC	blood vessel:	n/a
50	chr9:2047160-2047210	GM19239	blood:	n/a

(count:26 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:2014683..2019202-chr9:2026620..2030174,6	MCF-7	breast:
2	chr9:2035867..2037863-chr9:2040595..2043579,2	MCF-7	breast:
3	chr9:2016568..2019114-chr9:2030660..2033552,2	MCF-7	breast:
4	chr9:2014062..2016473-chr9:2041837..2045472,3	MCF-7	breast:
5	chr9:2025406..2027101-chr9:2041465..2044182,2	K562	blood:
6	chr9:2015057..2017007-chr9:2029405..2032085,2	K562	blood:
7	chr9:2015330..2018297-chr9:2035684..2039047,3	MCF-7	breast:
8	chr9:2061237..2063006-chr9:2063719..2066539,2	K562	blood:
9	chr9:2035810..2037705-chr9:2044015..2046964,2	K562	blood:
10	chr9:2027773..2030143-chr9:2034628..2037514,2	K562	blood:
11	chr9:2030993..2033791-chr9:2034490..2037168,2	K562	blood:
12	chr9:2027542..2030484-chr9:2031269..2033941,3	K562	blood:
13	chr9:2038457..2040329-chr9:2040850..2042831,2	K562	blood:
14	chr9:2031596..2033809-chr9:2036447..2038109,2	MCF-7	breast:
15	chr9:2025445..2029095-chr9:2029321..2031633,5	K562	blood:
16	chr9:2016166..2018399-chr9:2051368..2053339,2	MCF-7	breast:
17	chr9:2012580..2014743-chr9:2038420..2041072,2	K562	blood:
18	chr9:2061237..2063006-chr9:2063719..2066539,2	K562	blood:
19	chr9:2015277..2016837-chr9:2046158..2048018,2	K562	blood:
20	chr9:2015290..2017230-chr9:2035454..2037354,2	MCF-7	breast:
21	chr9:2019923..2022306-chr9:2028801..2031582,2	K562	blood:
22	chr9:2014709..2017122-chr9:2062966..2067398,3	MCF-7	breast:
23	chr9:2027542..2030484-chr9:2031269..2033941,3	K562	blood:
24	chr9:2017363..2019516-chr9:2029024..2032521,3	K562	blood:
25	chr9:2035867..2037863-chr9:2040595..2043579,2	MCF-7	breast:
26	chr9:2038457..2040329-chr9:2040850..2042831,2	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIAA0020-2	chr9:2045835-2046023	ENSG00000236199.1
2	lnc-KIAA0020-2	chr9:2041900-2042130	ENSG00000236199.1
3	lnc-VLDLR-4	chr9:2042994-2046019	NONHSAT129986

No data

Variant related genes	Relation type
ENSG00000236199	TF binding region
SMARCA2	TF binding region
ENSG00000236199	CpG island
SMARCA2	CpG island
ENSG00000236199	chromatin interactions
ENSG00000080503	chromatin interactions

Extended variants
information (count: 1734 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:1734 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10964465	chr9:2028757-2028758	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs147397142	chr9:2028782-2028783	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs546875444	chr9:2028795-2028796	Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs566546008	chr9:2028829-2028830	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs535679831	chr9:2028835-2028836	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs555153686	chr9:2028860-2028861	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs114835998	chr9:2028908-2028909	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs181705230	chr9:2028941-2028942	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs10964466	chr9:2028942-2028943	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs577231492	chr9:2028945-2028946	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs187133109	chr9:2028946-2028947	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs368879989	chr9:2028993-2028994	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs370082404	chr9:2028996-2028997	Weak transcription Enhancers Genic enhancers Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs10964468	chr9:2029018-2029019	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs149689575	chr9:2029049-2029050	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs145516397	chr9:2029053-2029054	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs543241889	chr9:2029072-2029073	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs148865068	chr9:2029073-2029074	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs146990134	chr9:2029119-2029120	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs562820489	chr9:2029125-2029126	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs374826893	chr9:2029140-2029141	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs531812409	chr9:2029152-2029153	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs191818866	chr9:2029179-2029180	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs10964470	chr9:2029196-2029197	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs138129490	chr9:2029197-2029198	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs10964471	chr9:2029199-2029200	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs143478968	chr9:2029230-2029231	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs529054959	chr9:2029232-2029233	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs549131393	chr9:2029261-2029262	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs369940166	chr9:2029275-2029276	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs147167367	chr9:2029309-2029310	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs557437093	chr9:2029314-2029315	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs570910536	chr9:2029365-2029366	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs148650539	chr9:2029391-2029392	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs12378503	chr9:2029392-2029393	Weak transcription Enhancers Strong transcription Genic enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs554156802	chr9:2029407-2029408	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs377185905	chr9:2029429-2029430	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs7864163	chr9:2029454-2029455	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs542973963	chr9:2029472-2029473	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs556683063	chr9:2029474-2029475	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs576719374	chr9:2029483-2029484	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs538039056	chr9:2029600-2029601	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs565418533	chr9:2029617-2029618	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs369780562	chr9:2029668-2029669	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs527670066	chr9:2029671-2029672	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs372543577	chr9:2029688-2029689	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs574591051	chr9:2029711-2029712	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs200951060	chr9:2029797-2029798	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs561145046	chr9:2029837-2029838	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs12341593	chr9:2029855-2029856	Weak transcription Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Peripheral t-cell lymphoma	19118030	CNVD

Chromatin state (count:1552 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:2018200-2033400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:2019000-2032800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr9:2019000-2033200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr9:2019200-2032600	Weak transcription	A549	lung
5	chr9:2019200-2039400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr9:2019400-2030000	Enhancers	Adipose Nuclei	Adipose
7	chr9:2019400-2030400	Enhancers	Colon Smooth Muscle	Colon
8	chr9:2019400-2030800	Weak transcription	NHDF-Ad	bronchial
9	chr9:2019400-2032800	Weak transcription	Osteobl	bone
10	chr9:2019400-2033000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr9:2019400-2033200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
12	chr9:2020000-2033000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr9:2020400-2028800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
14	chr9:2022000-2032200	Weak transcription	NHEK	skin
15	chr9:2022200-2029600	Enhancers	Primary T helper cells fromperipheralblood	blood
16	chr9:2022800-2029200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
17	chr9:2023200-2030600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
18	chr9:2023200-2032400	Weak transcription	Fetal Kidney	kidney
19	chr9:2023400-2029400	Enhancers	Primary T killer memory cells from peripheral blood	blood
20	chr9:2023400-2029800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
21	chr9:2023400-2030000	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr9:2023600-2031000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
23	chr9:2023600-2033000	Weak transcription	Fetal Brain Female	brain
24	chr9:2023800-2029600	Enhancers	Primary T helper naive cells from peripheral blood	blood
25	chr9:2023800-2029600	Enhancers	Brain Anterior Caudate	brain
26	chr9:2023800-2032400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
27	chr9:2024000-2039400	Weak transcription	Stomach Mucosa	stomach
28	chr9:2024600-2029200	Enhancers	Primary T cells from cord blood	blood
29	chr9:2024800-2032400	Weak transcription	Hela-S3	cervix
30	chr9:2025000-2029800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
31	chr9:2025000-2033000	Weak transcription	HSMMtube	muscle
32	chr9:2025200-2033000	Weak transcription	Thymus	Thymus
33	chr9:2025200-2044600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
34	chr9:2025400-2029600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
35	chr9:2025400-2033000	Weak transcription	Colonic Mucosa	Colon
36	chr9:2025400-2044000	Weak transcription	HUES48 Cell Line	embryonic stem cell
37	chr9:2025600-2032600	Weak transcription	Muscle Satellite Cultured Cells	--
38	chr9:2025600-2033000	Weak transcription	HUES6 Cell Line	embryonic stem cell
39	chr9:2025600-2033000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
40	chr9:2025600-2040000	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr9:2025600-2041200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
42	chr9:2025800-2029200	Weak transcription	Brain Substantia Nigra	brain
43	chr9:2025800-2030000	Weak transcription	Fetal Stomach	stomach
44	chr9:2025800-2032400	Weak transcription	Duodenum Mucosa	Duodenum
45	chr9:2025800-2033000	Weak transcription	Fetal Thymus	thymus
46	chr9:2025800-2033000	Weak transcription	HepG2	liver
47	chr9:2025800-2043600	Weak transcription	Fetal Heart	heart
48	chr9:2026000-2028800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
49	chr9:2026000-2033000	Weak transcription	Fetal Intestine Small	intestine
50	chr9:2026000-2037400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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