Variant report

Variant	nsv466514
Chromosome Location	chr9:116810890-116867054
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1232)
CpG islands
(count:1406)
Chromatin interactive
region (count:52)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1232 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:116842638-116844032	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:116840488-116840966	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:116844279-116845083	HepG2	liver:	n/a	n/a
4	ATF1	chr9:116814387-116814445	K562	blood:	n/a	n/a
5	ATF3	chr9:116842974-116843531	A549	lung:	n/a	n/a
6	ATF3	chr9:116842433-116843590	A549	lung:	n/a	n/a
7	BACH1	chr9:116840658-116841126	K562	blood:	n/a	n/a
8	BACH1	chr9:116840541-116841228	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL3	chr9:116844297-116845192	A549	lung:	n/a	n/a
10	BCL3	chr9:116842806-116843812	A549	lung:	n/a	chr9:116843045-116843054 chr9:116843046-116843055
11	BCL3	chr9:116842282-116843923	A549	lung:	n/a	chr9:116843045-116843054 chr9:116843046-116843055
12	BHLHE40	chr9:116838098-116838321	HepG2	liver:	n/a	n/a
13	BHLHE40	chr9:116844832-116845056	GM12878	blood:	n/a	n/a
14	BHLHE40	chr9:116840430-116841326	HepG2	liver:	n/a	n/a
15	BHLHE40	chr9:116812468-116812844	HepG2	liver:	n/a	n/a
16	BHLHE40	chr9:116844108-116845133	HepG2	liver:	n/a	n/a
17	BHLHE40	chr9:116820908-116821332	HepG2	liver:	n/a	n/a
18	BRCA1	chr9:116843080-116843583	HepG2	liver:	n/a	n/a
19	BRCA1	chr9:116844351-116845068	HepG2	liver:	n/a	n/a
20	BRCA1	chr9:116840522-116840580	HepG2	liver:	n/a	chr9:116840536-116840543
21	CBX3	chr9:116844650-116845093	K562	blood:	n/a	n/a
22	CBX3	chr9:116864807-116865125	K562	blood:	n/a	n/a
23	CBX3	chr9:116864751-116865191	HCT-116	colon:	n/a	n/a
24	CBX3	chr9:116864794-116865133	K562	blood:	n/a	n/a
25	CEBPB	chr9:116812836-116812993	K562	blood:	n/a	chr9:116812922-116812933
26	CEBPB	chr9:116844432-116844633	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
27	CEBPB	chr9:116843085-116843653	A549	lung:	n/a	n/a
28	CEBPB	chr9:116812751-116813071	HepG2	liver:	n/a	chr9:116812922-116812933
29	CEBPB	chr9:116843160-116843568	A549	lung:	n/a	n/a
30	CEBPB	chr9:116844347-116845055	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
31	CEBPB	chr9:116843108-116843979	HepG2	liver:	n/a	chr9:116843795-116843806
32	CEBPB	chr9:116840525-116840881	HepG2	liver:	n/a	n/a
33	CEBPB	chr9:116843161-116843532	HepG2	liver:	n/a	n/a
34	CEBPB	chr9:116844846-116845109	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr9:116844213-116845089	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
36	CEBPB	chr9:116844308-116844769	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
37	CEBPB	chr9:116840439-116840891	HepG2	liver:	n/a	n/a
38	CEBPB	chr9:116825225-116825572	HepG2	liver:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
39	CEBPB	chr9:116825373-116825441	K562	blood:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
40	CEBPB	chr9:116831179-116831303	H1-hESC	embryonic stem cell:	n/a	chr9:116831285-116831298
41	CEBPB	chr9:116825258-116825499	IMR90	lung:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
42	CEBPB	chr9:116844795-116845110	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr9:116831120-116831410	HepG2	liver:	n/a	chr9:116831285-116831298 chr9:116831307-116831319
44	CEBPB	chr9:116843102-116843647	HepG2	liver:	n/a	n/a
45	CEBPB	chr9:116825316-116825482	HepG2	liver:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
46	CEBPB	chr9:116825231-116825602	MCF-7	breast:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
47	CEBPB	chr9:116832616-116832630	HepG2	liver:	n/a	n/a
48	CEBPB	chr9:116842549-116843727	A549	lung:	n/a	n/a
49	CEBPB	chr9:116844434-116845166	A549	lung:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
50	CEBPB	chr9:116831154-116831332	IMR90	lung:	n/a	chr9:116831285-116831298 chr9:116831307-116831319

(count:1406 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:116860650-116860700	HIPEpiC	eye:	n/a
2	chr9:116811229-116811279	ovcar-3	ovarian:	n/a
3	chr9:116812388-116812438	HPAEpiC	pulmonary alveolar:	n/a
4	chr9:116860650-116860700	HIPEpiC	eye:	n/a
5	chr9:116811229-116811279	ovcar-3	ovarian:	n/a
6	chr9:116812388-116812438	HPAEpiC	pulmonary alveolar:	n/a
7	chr9:116861532-116861582	SKMC	muscle:	n/a
8	chr9:116811954-116812004	ECC-1	luminal epithelium:	n/a
9	chr9:116813975-116814025	H1-hESC	embryonic stem cell:	embryo
10	chr9:116861288-116861338	AG09319	gingival:	n/a
11	chr9:116811789-116811839	AG10803	skin:	n/a
12	chr9:116840825-116840875	AG09319	gingival:	n/a
13	chr9:116811633-116811683	PFSK-1	brain:	n/a
14	chr9:116861442-116861492	AG04449	skin:	fetal
15	chr9:116860437-116860487	AG10803	skin:	n/a
16	chr9:116861532-116861582	ProgFib	skin:	n/a
17	chr9:116813975-116814025	SKMC	muscle:	n/a
18	chr9:116840825-116840875	HUVEC	blood vessel:	n/a
19	chr9:116858634-116858684	GM19239	blood:	n/a
20	chr9:116858634-116858684	HEK293	kidney:	embryo
21	chr9:116811789-116811839	SK-N-SH_RA	brain:	n/a
22	chr9:116861442-116861492	SK-N-SH	brain:	n/a
23	chr9:116860500-116860550	PFSK-1	brain:	n/a
24	chr9:116861288-116861338	ovcar-3	ovarian:	n/a
25	chr9:116837795-116837845	HCF	heart:	n/a
26	chr9:116817641-116817691	AoSMC	blood vessel:	n/a
27	chr9:116861532-116861582	MCF-7	breast:	n/a
28	chr9:116861288-116861338	MCF10A-Er-Src	breast:	n/a
29	chr9:116860437-116860487	Hepatocyte	liver:	n/a
30	chr9:116859631-116859681	MCF-7	breast:	n/a
31	chr9:116856710-116856760	HCF	heart:	n/a
32	chr9:116837795-116837845	IMR90	lung:	fetal
33	chr9:116861442-116861492	SAEC	small airway:	n/a
34	chr9:116812263-116812313	HCF	heart:	n/a
35	chr9:116860500-116860550	LNCaP	prostate:	n/a
36	chr9:116822850-116822900	H1-hESC	embryonic stem cell:	embryo
37	chr9:116858634-116858684	NT2-D1	testis:	n/a
38	chr9:116861404-116861454	HAEpiC	amniotic membrane:	n/a
39	chr9:116861532-116861582	HCPEpiC	choroid plexus:	n/a
40	chr9:116861442-116861492	NHDF-neo	bronchial:	n/a
41	chr9:116813975-116814025	HL-60	blood:	n/a
42	chr9:116861532-116861582	NH-A	brain:	n/a
43	chr9:116861532-116861582	HRCEpiC	kidney:	n/a
44	chr9:116837795-116837845	Caco-2	colon:	n/a
45	chr9:116840435-116840485	BE2_C	brain:	n/a
46	chr9:116861404-116861454	A549	lung:	n/a
47	chr9:116860500-116860550	GM12891	blood:	n/a
48	chr9:116811229-116811279	AoSMC	blood vessel:	n/a
49	chr9:116811789-116811839	SK-N-MC	brain:	n/a
50	chr9:116860500-116860550	GM12878	blood:	n/a

(count:52 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr9:116822066..116823998-chr9:116833040..116834650,2	MCF-7	breast:
2	chr9:116846559..116847181-chr9:117043604..117044541,2	MCF-7	breast:
3	chr9:116810230..116814286-chr9:116816230..116818443,3	K562	blood:
4	chr9:116847982..116849837-chr9:116858325..116860933,2	MCF-7	breast:
5	chr9:116718450..116721380-chr9:116821221..116823441,2	MCF-7	breast:
6	chr9:116821881..116823558-chr9:116825884..116828799,2	K562	blood:
7	chr9:116842742..116844725-chr9:116847223..116849817,2	K562	blood:
8	chr9:116846273..116847216-chr9:116922173..116922681,2	MCF-7	breast:
9	chr9:116846785..116849126-chr9:116861196..116862830,2	MCF-7	breast:
10	chr1:106001832..106002553-chr9:116841509..116842188,2	MCF-7	breast:
11	chr9:116849164..116851925-chr9:116855946..116857898,2	MCF-7	breast:
12	chr9:116820042..116822386-chr9:116830008..116831532,2	K562	blood:
13	chr9:116856264..116859004-chr9:116870407..116871935,2	MCF-7	breast:
14	chr9:116820042..116822386-chr9:116830008..116831532,2	K562	blood:
15	chr9:116841868..116844591-chr9:116846288..116849534,3	MCF-7	breast:
16	chr9:116637031..116639708-chr9:116859646..116861440,2	MCF-7	breast:
17	chr9:116836243..116838411-chr9:116841082..116842914,2	MCF-7	breast:
18	chr9:116859675..116862094-chr9:116864175..116866038,2	MCF-7	breast:
19	chr9:116850338..116853034-chr9:116856193..116858808,2	K562	blood:
20	chr9:116822066..116823998-chr9:116833040..116834650,2	MCF-7	breast:
21	chr9:116844498..116845455-chr9:117033807..117034432,3	MCF-7	breast:
22	chr9:116844821..116845361-chr9:116869981..116870487,2	MCF-7	breast:
23	chr9:116845927..116847866-chr9:117052148..117055626,3	MCF-7	breast:
24	chr9:116818048..116820109-chr9:116840405..116843134,2	MCF-7	breast:
25	chr9:116843708..116846188-chr9:116846451..116849353,3	MCF-7	breast:
26	chr9:116844450..116845667-chr9:117052850..117054752,10	K562	blood:
27	chr9:116845277..116847223-chr9:116852930..116854750,2	K562	blood:
28	chr9:116844247..116845566-chr9:117052560..117054100,7	MCF-7	breast:
29	chr9:116845277..116847223-chr9:116852930..116854750,2	K562	blood:
30	chr9:116844678..116846349-chr9:117050619..117053590,2	MCF-7	breast:
31	chr9:116808442..116810806-chr9:116812580..116815116,3	MCF-7	breast:
32	chr9:116837426..116839732-chr9:116847214..116849059,3	MCF-7	breast:
33	chr9:116844518..116845085-chr9:116869930..116870489,2	MCF-7	breast:
34	chr9:116841868..116844591-chr9:116846288..116849534,3	MCF-7	breast:
35	chr9:116836828..116838763-chr9:116843693..116846191,2	K562	blood:
36	chr9:116810230..116814286-chr9:116816230..116818443,3	K562	blood:
37	chr9:116843708..116846188-chr9:116846451..116849353,3	MCF-7	breast:
38	chr9:116844543..116845536-chr9:117026114..117026681,2	K562	blood:
39	chr9:116837232..116841114-chr9:116841892..116845820,4	MCF-7	breast:
40	chr9:116837426..116839732-chr9:116847214..116849059,3	MCF-7	breast:
41	chr9:116848752..116850800-chr9:116852040..116854106,2	MCF-7	breast:
42	chr9:116850338..116853324-chr9:116855246..116858808,3	K562	blood:
43	chr9:116844851..116845417-chr9:117067843..117068379,2	MCF-7	breast:
44	chr9:116844093..116845109-chr9:117068221..117068772,3	K562	blood:
45	chr9:116821881..116823558-chr9:116825884..116828799,2	K562	blood:
46	chr9:116844453..116844997-chr9:117033798..117034722,3	MCF-7	breast:
47	chr9:116844583..116845499-chr9:117067855..117068993,4	MCF-7	breast:
48	chr9:116848752..116850800-chr9:116852040..116854106,2	MCF-7	breast:
49	chr9:116843600..116846294-chr9:117069884..117072218,2	MCF-7	breast:
50	chr9:116638359..116640217-chr9:116810086..116811628,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIF12-1	chr9:116855509-116855777	NONHSAT134365
2	lnc-KIF12-1	chr9:116856166-116856197	NONHSAT134365
3	lnc-KIF12-1	chr9:116848406-116848504	NONHSAT134365
4	lnc-ZNF618-1	chr9:116817671-116818875	NONHSAT134364

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF618	hsa-miR-193b-3p	chr9:116816952-116816958

Variant related genes	Relation type
AMBP	TF binding region
KIF12	TF binding region
AMBP	CpG island
KIF12	CpG island
ENSG00000157657	chromatin interactions
ENSG00000136883	chromatin interactions
ENSG00000196739	chromatin interactions
ENSG00000106927	chromatin interactions

Extended variants
information (count: 2514 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:2514 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3827675	chr9:116810890-116810891	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs572248929	chr9:116810893-116810894	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs200581444	chr9:116810927-116810928	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs190597134	chr9:116810943-116810944	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs373820121	chr9:116810961-116810962	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs376785627	chr9:116810968-116810969	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs371074016	chr9:116810979-116810980	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs180950123	chr9:116810989-116810990	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs139288828	chr9:116811000-116811001	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs118179554	chr9:116811002-116811003	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs145329140	chr9:116811003-116811004	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs200517991	chr9:116811007-116811008	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs575186686	chr9:116811011-116811012	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs375942993	chr9:116811013-116811014	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs370287825	chr9:116811019-116811020	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs201682920	chr9:116811025-116811026	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs200886401	chr9:116811055-116811056	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs373735776	chr9:116811099-116811100	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs543672407	chr9:116811139-116811140	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs367568651	chr9:116811148-116811149	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs7852282	chr9:116811184-116811185	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs551959984	chr9:116811216-116811217	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs571794106	chr9:116811220-116811221	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs375459435	chr9:116811229-116811230	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs368466423	chr9:116811252-116811253	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs41277731	chr9:116811268-116811269	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs73558321	chr9:116811280-116811281	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs201941096	chr9:116811295-116811296	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs62620240	chr9:116811339-116811340	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs201251335	chr9:116811340-116811341	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs572205421	chr9:116811348-116811349	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs372911485	chr9:116811349-116811350	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs376102134	chr9:116811355-116811356	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs367785776	chr9:116811356-116811357	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs62640056	chr9:116811385-116811386	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs16912115	chr9:116811394-116811395	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs369421645	chr9:116811400-116811401	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs140970290	chr9:116811409-116811410	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs573623027	chr9:116811427-116811428	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs187156359	chr9:116811432-116811433	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs150142900	chr9:116811433-116811434	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs376584700	chr9:116811441-116811442	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs61745986	chr9:116811445-116811446	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs372758808	chr9:116811451-116811452	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs375985037	chr9:116811454-116811455	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs199917045	chr9:116811462-116811463	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs200316448	chr9:116811477-116811478	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs373497412	chr9:116811483-116811484	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs141487834	chr9:116811507-116811508	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs201846984	chr9:116811508-116811509	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Lung cancer	19147751	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Bladder cancer	21909424	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21509527	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Melanoma	17363583	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1000 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116766600-116811200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr9:116785200-116811200	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr9:116787000-116812800	Weak transcription	Primary B cells from cord blood	blood
4	chr9:116793200-116811200	Weak transcription	Stomach Mucosa	stomach
5	chr9:116793200-116812200	Weak transcription	K562	blood
6	chr9:116793200-116813800	Weak transcription	NHEK	skin
7	chr9:116795200-116821800	Weak transcription	Right Atrium	heart
8	chr9:116796200-116815800	Weak transcription	Small Intestine	intestine
9	chr9:116799000-116811200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr9:116799200-116811200	Weak transcription	Colon Smooth Muscle	Colon
11	chr9:116800000-116811200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
12	chr9:116800000-116811200	Weak transcription	Brain Substantia Nigra	brain
13	chr9:116800000-116811200	Weak transcription	Right Ventricle	heart
14	chr9:116800800-116811000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr9:116800800-116811200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr9:116801000-116811200	Weak transcription	Left Ventricle	heart
17	chr9:116801000-116812000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
18	chr9:116801400-116811000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr9:116801600-116811000	Weak transcription	Esophagus	oesophagus
20	chr9:116801600-116811000	Weak transcription	Rectal Smooth Muscle	rectum
21	chr9:116804400-116816400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr9:116805800-116813400	Weak transcription	Fetal Brain Male	brain
23	chr9:116806200-116811200	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr9:116807400-116814400	Strong transcription	Fetal Lung	lung
25	chr9:116807600-116817200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
26	chr9:116807800-116815200	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr9:116807800-116816200	Strong transcription	Liver	Liver
28	chr9:116808000-116811000	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr9:116808400-116816600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr9:116808600-116811200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr9:116808600-116817600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr9:116808800-116812400	Strong transcription	HSMM	muscle
33	chr9:116809200-116811000	Strong transcription	Fetal Heart	heart
34	chr9:116809200-116814400	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr9:116809400-116816200	Strong transcription	HUVEC	blood vessel
36	chr9:116809400-116818800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr9:116809800-116811400	Strong transcription	Fetal Kidney	kidney
38	chr9:116809800-116814600	Strong transcription	A549	lung
39	chr9:116809800-116815000	Strong transcription	HUES6 Cell Line	embryonic stem cell
40	chr9:116809800-116815000	Strong transcription	Primary hematopoietic stem cells short term culture	blood
41	chr9:116809800-116815000	Strong transcription	Ovary	ovary
42	chr9:116809800-116815000	Strong transcription	NHLF	lung
43	chr9:116809800-116816400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
44	chr9:116809800-116817600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
45	chr9:116809800-116821600	Strong transcription	Fetal Stomach	stomach
46	chr9:116809800-116822000	Strong transcription	Fetal Intestine Small	intestine
47	chr9:116810000-116811200	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
48	chr9:116810000-116811600	Strong transcription	Primary hematopoietic stem cells	blood
49	chr9:116810000-116812200	Strong transcription	Cortex derived primary cultured neurospheres	brain
50	chr9:116810000-116813000	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin

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