Variant report

Variant	nsv466516
Chromosome Location	chr9:116815777-116867054
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1215)
CpG islands
(count:978)
Chromatin interactive
region (count:49)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:1215 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:116840488-116840966	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:116844279-116845083	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:116842638-116844032	HepG2	liver:	n/a	n/a
4	ATF3	chr9:116842974-116843531	A549	lung:	n/a	n/a
5	ATF3	chr9:116842433-116843590	A549	lung:	n/a	n/a
6	BACH1	chr9:116840658-116841126	K562	blood:	n/a	n/a
7	BACH1	chr9:116840541-116841228	H1-hESC	embryonic stem cell:	n/a	n/a
8	BCL3	chr9:116842806-116843812	A549	lung:	n/a	chr9:116843045-116843054 chr9:116843046-116843055
9	BCL3	chr9:116842282-116843923	A549	lung:	n/a	chr9:116843045-116843054 chr9:116843046-116843055
10	BCL3	chr9:116844297-116845192	A549	lung:	n/a	n/a
11	BHLHE40	chr9:116844108-116845133	HepG2	liver:	n/a	n/a
12	BHLHE40	chr9:116844832-116845056	GM12878	blood:	n/a	n/a
13	BHLHE40	chr9:116820908-116821332	HepG2	liver:	n/a	n/a
14	BHLHE40	chr9:116838098-116838321	HepG2	liver:	n/a	n/a
15	BHLHE40	chr9:116840430-116841326	HepG2	liver:	n/a	n/a
16	BRCA1	chr9:116843080-116843583	HepG2	liver:	n/a	n/a
17	BRCA1	chr9:116844351-116845068	HepG2	liver:	n/a	n/a
18	BRCA1	chr9:116840522-116840580	HepG2	liver:	n/a	chr9:116840536-116840543
19	CBX3	chr9:116864794-116865133	K562	blood:	n/a	n/a
20	CBX3	chr9:116844650-116845093	K562	blood:	n/a	n/a
21	CBX3	chr9:116864751-116865191	HCT-116	colon:	n/a	n/a
22	CBX3	chr9:116864807-116865125	K562	blood:	n/a	n/a
23	CEBPB	chr9:116844213-116845089	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
24	CEBPB	chr9:116844434-116845166	A549	lung:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
25	CEBPB	chr9:116825316-116825482	HepG2	liver:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
26	CEBPB	chr9:116843085-116843653	A549	lung:	n/a	n/a
27	CEBPB	chr9:116825258-116825499	IMR90	lung:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
28	CEBPB	chr9:116825225-116825572	HepG2	liver:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
29	CEBPB	chr9:116831120-116831410	HepG2	liver:	n/a	chr9:116831285-116831298 chr9:116831307-116831319
30	CEBPB	chr9:116843102-116843647	HepG2	liver:	n/a	n/a
31	CEBPB	chr9:116843160-116843568	A549	lung:	n/a	n/a
32	CEBPB	chr9:116831154-116831332	IMR90	lung:	n/a	chr9:116831285-116831298 chr9:116831307-116831319
33	CEBPB	chr9:116825373-116825441	K562	blood:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
34	CEBPB	chr9:116844432-116844633	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
35	CEBPB	chr9:116840525-116840881	HepG2	liver:	n/a	n/a
36	CEBPB	chr9:116844795-116845110	Hela-S3	cervix:	n/a	n/a
37	CEBPB	chr9:116843108-116843979	HepG2	liver:	n/a	chr9:116843795-116843806
38	CEBPB	chr9:116832616-116832630	HepG2	liver:	n/a	n/a
39	CEBPB	chr9:116840439-116840891	HepG2	liver:	n/a	n/a
40	CEBPB	chr9:116842549-116843727	A549	lung:	n/a	n/a
41	CEBPB	chr9:116844308-116844769	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
42	CEBPB	chr9:116843161-116843532	HepG2	liver:	n/a	n/a
43	CEBPB	chr9:116844347-116845055	HepG2	liver:	n/a	chr9:116844531-116844544 chr9:116844533-116844544
44	CEBPB	chr9:116844846-116845109	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr9:116825231-116825602	MCF-7	breast:	n/a	chr9:116825393-116825402 chr9:116825391-116825404 chr9:116825391-116825402
46	CEBPB	chr9:116831179-116831303	H1-hESC	embryonic stem cell:	n/a	chr9:116831285-116831298
47	CEBPD	chr9:116840273-116840979	HepG2	liver:	n/a	n/a
48	CEBPD	chr9:116843251-116843649	HepG2	liver:	n/a	n/a
49	CEBPD	chr9:116821007-116821980	HepG2	liver:	n/a	n/a
50	CEBPD	chr9:116843056-116843916	HepG2	liver:	n/a	n/a

(count:978 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:116837795-116837845	HMEC	breast:	n/a
2	chr9:116860500-116860550	PANC-1	pancreas:	n/a
3	chr9:116837795-116837845	HMEC	breast:	n/a
4	chr9:116860500-116860550	PANC-1	pancreas:	n/a
5	chr9:116856710-116856760	BJ	skin:	n/a
6	chr9:116837795-116837845	Hela-S3	cervix:	n/a
7	chr9:116841084-116841134	IMR90	lung:	fetal
8	chr9:116856710-116856760	CMK	blood:	n/a
9	chr9:116861442-116861492	AG09319	gingival:	n/a
10	chr9:116817641-116817691	H1-hESC	embryonic stem cell:	embryo
11	chr9:116858634-116858684	GM12891	blood:	n/a
12	chr9:116840825-116840875	HCF	heart:	n/a
13	chr9:116840435-116840485	RPTEC	kidney:	n/a
14	chr9:116860500-116860550	AG09309	skin:	n/a
15	chr9:116861532-116861582	A549	lung:	n/a
16	chr9:116856710-116856760	NB4	blood:	n/a
17	chr9:116860650-116860700	GM12878	blood:	n/a
18	chr9:116858634-116858684	HRE	kidney:	n/a
19	chr9:116840435-116840485	AG10803	skin:	n/a
20	chr9:116856710-116856760	ovcar-3	ovarian:	n/a
21	chr9:116841084-116841134	NB4	blood:	n/a
22	chr9:116861532-116861582	NT2-D1	testis:	n/a
23	chr9:116856710-116856760	MCF-7	breast:	n/a
24	chr9:116840435-116840485	HL-60	blood:	n/a
25	chr9:116861532-116861582	HL-60	blood:	n/a
26	chr9:116840825-116840875	ECC-1	luminal epithelium:	n/a
27	chr9:116861404-116861454	BJ	skin:	n/a
28	chr9:116858634-116858684	GM19239	blood:	n/a
29	chr9:116860437-116860487	T-47D	breast:	n/a
30	chr9:116822850-116822900	Hela-S3	cervix:	n/a
31	chr9:116840435-116840485	A549	lung:	n/a
32	chr9:116860650-116860700	NB4	blood:	n/a
33	chr9:116859631-116859681	HCM	heart:	n/a
34	chr9:116817641-116817691	HL-60	blood:	n/a
35	chr9:116860650-116860700	HCPEpiC	choroid plexus:	n/a
36	chr9:116841084-116841134	MCF10A-Er-Src	breast:	n/a
37	chr9:116861442-116861492	NH-A	brain:	n/a
38	chr9:116861288-116861338	AG09309	skin:	n/a
39	chr9:116860437-116860487	NHDF-neo	bronchial:	n/a
40	chr9:116837795-116837845	GM12891	blood:	n/a
41	chr9:116861404-116861454	Jurkat	blood:	n/a
42	chr9:116840435-116840485	ovcar-3	ovarian:	n/a
43	chr9:116840435-116840485	NB4	blood:	n/a
44	chr9:116860500-116860550	MCF10A-Er-Src	breast:	n/a
45	chr9:116860500-116860550	SKMC	muscle:	n/a
46	chr9:116841084-116841134	HRCEpiC	kidney:	n/a
47	chr9:116840825-116840875	NB4	blood:	n/a
48	chr9:116860437-116860487	HNPCEpiC	eye:	n/a
49	chr9:116861404-116861454	PFSK-1	brain:	n/a
50	chr9:116840435-116840485	GM12878	blood:	n/a

(count:49 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr9:116846559..116847181-chr9:117043604..117044541,2	MCF-7	breast:
2	chr9:116718450..116721380-chr9:116821221..116823441,2	MCF-7	breast:
3	chr9:116844093..116845109-chr9:117068221..117068772,3	K562	blood:
4	chr9:116821881..116823558-chr9:116825884..116828799,2	K562	blood:
5	chr9:116844450..116845667-chr9:117052850..117054752,10	K562	blood:
6	chr9:116841868..116844591-chr9:116846288..116849534,3	MCF-7	breast:
7	chr9:116821881..116823558-chr9:116825884..116828799,2	K562	blood:
8	chr9:116856264..116859004-chr9:116870407..116871935,2	MCF-7	breast:
9	chr9:116859675..116862094-chr9:116864175..116866038,2	MCF-7	breast:
10	chr9:116842742..116844725-chr9:116847223..116849817,2	K562	blood:
11	chr9:116844453..116844997-chr9:117033798..117034722,3	MCF-7	breast:
12	chr9:116844678..116846349-chr9:117050619..117053590,2	MCF-7	breast:
13	chr9:116822066..116823998-chr9:116833040..116834650,2	MCF-7	breast:
14	chr9:116850338..116853324-chr9:116855246..116858808,3	K562	blood:
15	chr9:116820042..116822386-chr9:116830008..116831532,2	K562	blood:
16	chr9:116637031..116639708-chr9:116859646..116861440,2	MCF-7	breast:
17	chr9:116844543..116845536-chr9:117026114..117026681,2	K562	blood:
18	chr9:116837426..116839732-chr9:116847214..116849059,3	MCF-7	breast:
19	chr9:116845927..116847866-chr9:117052148..117055626,3	MCF-7	breast:
20	chr9:116844498..116845455-chr9:117033807..117034432,3	MCF-7	breast:
21	chr9:116836243..116838411-chr9:116841082..116842914,2	MCF-7	breast:
22	chr9:116844821..116845361-chr9:116869981..116870487,2	MCF-7	breast:
23	chr9:116837232..116841114-chr9:116841892..116845820,4	MCF-7	breast:
24	chr9:116847982..116849837-chr9:116858325..116860933,2	MCF-7	breast:
25	chr9:116844583..116845499-chr9:117067855..117068993,4	MCF-7	breast:
26	chr9:116820042..116822386-chr9:116830008..116831532,2	K562	blood:
27	chr9:116841868..116844591-chr9:116846288..116849534,3	MCF-7	breast:
28	chr9:116818048..116820109-chr9:116840405..116843134,2	MCF-7	breast:
29	chr9:116843708..116846188-chr9:116846451..116849353,3	MCF-7	breast:
30	chr9:116822066..116823998-chr9:116833040..116834650,2	MCF-7	breast:
31	chr9:116844247..116845566-chr9:117052560..117054100,7	MCF-7	breast:
32	chr9:116846785..116849126-chr9:116861196..116862830,2	MCF-7	breast:
33	chr9:116845277..116847223-chr9:116852930..116854750,2	K562	blood:
34	chr9:116837426..116839732-chr9:116847214..116849059,3	MCF-7	breast:
35	chr1:106001832..106002553-chr9:116841509..116842188,2	MCF-7	breast:
36	chr9:116842742..116844725-chr9:116847223..116849817,2	K562	blood:
37	chr9:116845277..116847223-chr9:116852930..116854750,2	K562	blood:
38	chr9:116843600..116846294-chr9:117069884..117072218,2	MCF-7	breast:
39	chr9:116864243..116866474-chr9:116868618..116871598,3	MCF-7	breast:
40	chr9:116836828..116838763-chr9:116843693..116846191,2	K562	blood:
41	chr9:116844851..116845417-chr9:117067843..117068379,2	MCF-7	breast:
42	chr9:116848752..116850800-chr9:116852040..116854106,2	MCF-7	breast:
43	chr9:116810230..116814286-chr9:116816230..116818443,3	K562	blood:
44	chr9:116846273..116847216-chr9:116922173..116922681,2	MCF-7	breast:
45	chr9:116843708..116846188-chr9:116846451..116849353,3	MCF-7	breast:
46	chr9:116849164..116851925-chr9:116855946..116857898,2	MCF-7	breast:
47	chr9:116844518..116845085-chr9:116869930..116870489,2	MCF-7	breast:
48	chr9:116848752..116850800-chr9:116852040..116854106,2	MCF-7	breast:
49	chr9:116850338..116853034-chr9:116856193..116858808,2	K562	blood:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIF12-1	chr9:116855509-116855777	NONHSAT134365
2	lnc-KIF12-1	chr9:116848406-116848504	NONHSAT134365
3	lnc-ZNF618-1	chr9:116817671-116818875	NONHSAT134364
4	lnc-KIF12-1	chr9:116856166-116856197	NONHSAT134365

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF618	hsa-miR-193b-3p	chr9:116816952-116816958

Variant related genes	Relation type
AMBP	TF binding region
KIF12	TF binding region
AMBP	CpG island
KIF12	CpG island
ENSG00000136883	chromatin interactions
ENSG00000196739	chromatin interactions
ENSG00000157657	chromatin interactions
ENSG00000106927	chromatin interactions

Extended variants
information (count: 2239 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:2239 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs3810928	chr9:116815777-116815778	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	mRNA abundance
2	rs536252681	chr9:116815902-116815903	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs73658322	chr9:116815923-116815924	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs145338459	chr9:116815948-116815949	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs6478053	chr9:116815971-116815972	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs376558622	chr9:116815978-116815979	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs576208032	chr9:116816017-116816018	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs535658241	chr9:116816212-116816213	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs555235479	chr9:116816240-116816241	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs571892285	chr9:116816408-116816409	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs111469229	chr9:116816464-116816465	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs207470507	chr9:116816487-116816488	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs577260128	chr9:116816495-116816496	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs543010598	chr9:116816501-116816502	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs564030652	chr9:116816502-116816503	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs541214241	chr9:116816577-116816578	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs369528321	chr9:116816581-116816582	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs55994673	chr9:116816582-116816583	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs560015872	chr9:116816584-116816585	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs528691828	chr9:116816608-116816609	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
21	rs191409807	chr9:116816620-116816621	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
22	rs183815158	chr9:116816622-116816623	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
23	rs117724226	chr9:116816651-116816652	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
24	rs550675792	chr9:116816692-116816693	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
25	rs371342957	chr9:116816711-116816712	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
26	rs116341762	chr9:116816741-116816742	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
27	rs558443665	chr9:116816758-116816759	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
28	rs12554621	chr9:116816780-116816781	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
29	rs148397247	chr9:116816804-116816805	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs10739400	chr9:116816816-116816817	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs565586567	chr9:116816824-116816825	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs138976730	chr9:116816855-116816856	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs186331502	chr9:116816876-116816877	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs36118163	chr9:116816880-116816881	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs543420887	chr9:116816892-116816893	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs376624938	chr9:116816971-116816972	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs556716393	chr9:116817002-116817003	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs573557797	chr9:116817082-116817083	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs73658323	chr9:116817127-116817128	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs560076509	chr9:116817159-116817160	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs191542447	chr9:116817171-116817172	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs545568769	chr9:116817184-116817185	Weak transcription Strong transcription Genic enhancers Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs367806598	chr9:116817239-116817240	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs182523371	chr9:116817263-116817264	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs551040378	chr9:116817316-116817317	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs561326712	chr9:116817323-116817324	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs72759047	chr9:116817346-116817347	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs186667407	chr9:116817438-116817439	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs548907549	chr9:116817486-116817487	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs139919769	chr9:116817497-116817498	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Lung cancer	19147751	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Bladder cancer	21909424	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	21509527	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cervical cancer	16585170	CNVD
Ependymoma	19289631	CNVD
Melanoma	17363583	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:874 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116795200-116821800	Weak transcription	Right Atrium	heart
2	chr9:116796200-116815800	Weak transcription	Small Intestine	intestine
3	chr9:116804400-116816400	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr9:116807600-116817200	Strong transcription	Breast Myoepithelial Primary Cells	Breast
5	chr9:116807800-116816200	Strong transcription	Liver	Liver
6	chr9:116808400-116816600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:116808600-116817600	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr9:116809400-116816200	Strong transcription	HUVEC	blood vessel
9	chr9:116809400-116818800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr9:116809800-116816400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr9:116809800-116817600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr9:116809800-116821600	Strong transcription	Fetal Stomach	stomach
13	chr9:116809800-116822000	Strong transcription	Fetal Intestine Small	intestine
14	chr9:116810000-116816200	Strong transcription	Adipose Nuclei	Adipose
15	chr9:116810000-116816200	Strong transcription	Brain Germinal Matrix	brain
16	chr9:116810000-116816400	Strong transcription	Fetal Muscle Trunk	muscle
17	chr9:116810000-116817000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr9:116810000-116817600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
19	chr9:116810200-116816000	Strong transcription	Fetal Intestine Large	intestine
20	chr9:116810200-116816200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr9:116810200-116816200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr9:116810200-116816400	Strong transcription	Skeletal Muscle Male	skeletal muscle
23	chr9:116810200-116817200	Strong transcription	Fetal Muscle Leg	muscle
24	chr9:116810400-116816000	Strong transcription	Fetal Brain Female	brain
25	chr9:116811000-116816000	Weak transcription	Fetal Heart	heart
26	chr9:116811000-116816200	Strong transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr9:116811400-116822000	Weak transcription	Fetal Kidney	kidney
28	chr9:116811800-116819800	Strong transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr9:116812000-116816000	Strong transcription	Lung	lung
30	chr9:116812000-116821400	Weak transcription	Left Ventricle	heart
31	chr9:116812000-116821400	Weak transcription	NHDF-Ad	bronchial
32	chr9:116812000-116821600	Weak transcription	Brain Angular Gyrus	brain
33	chr9:116812000-116824200	Weak transcription	Rectal Mucosa Donor 31	rectum
34	chr9:116812200-116817600	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr9:116812200-116819600	Weak transcription	Cortex derived primary cultured neurospheres	brain
36	chr9:116812200-116820600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr9:116812200-116821400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr9:116812200-116824600	Weak transcription	Colonic Mucosa	Colon
39	chr9:116812200-116824800	Weak transcription	Right Ventricle	heart
40	chr9:116812200-116827400	Weak transcription	Pancreatic Islets	Pancreatic Islet
41	chr9:116812400-116817400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
42	chr9:116812400-116821200	Weak transcription	HSMM	muscle
43	chr9:116812400-116821400	Weak transcription	Brain Hippocampus Middle	brain
44	chr9:116812400-116824400	Weak transcription	Stomach Mucosa	stomach
45	chr9:116812600-116818200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr9:116812600-116821600	Weak transcription	Muscle Satellite Cultured Cells	--
47	chr9:116812800-116821800	Weak transcription	Brain Cingulate Gyrus	brain
48	chr9:116812800-116824400	Weak transcription	Sigmoid Colon	Sigmoid Colon
49	chr9:116813000-116816000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr9:116813000-116817600	Weak transcription	Thymus	Thymus

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links