Variant report

Variant	nsv466762
Chromosome Location	chr10:18932172-18976659
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1559)
CpG islands
(count:1955)
Chromatin interactive
region (count:37)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:5)

(count:1559 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:18970968-18971351	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:18940240-18940711	K562	blood:	n/a	n/a
3	ARID3A	chr10:18940347-18940712	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:18947107-18948550	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:18955212-18955521	HepG2	liver:	n/a	n/a
6	ARID3A	chr10:18947580-18948518	K562	blood:	n/a	n/a
7	ARID3A	chr10:18951398-18951476	K562	blood:	n/a	n/a
8	ARID3A	chr10:18936907-18937260	K562	blood:	n/a	n/a
9	ATF1	chr10:18940313-18940863	K562	blood:	n/a	n/a
10	ATF1	chr10:18947965-18948372	K562	blood:	n/a	chr10:18948213-18948227
11	ATF2	chr10:18947683-18948428	GM12878	blood:	n/a	chr10:18948213-18948227
12	ATF2	chr10:18940293-18940843	H1-hESC	embryonic stem cell:	n/a	chr10:18940564-18940575
13	ATF2	chr10:18940077-18940750	GM12878	blood:	n/a	chr10:18940564-18940575
14	ATF2	chr10:18947744-18948647	GM12878	blood:	n/a	chr10:18948213-18948227
15	ATF2	chr10:18947147-18947624	GM12878	blood:	n/a	n/a
16	ATF2	chr10:18940231-18940893	GM12878	blood:	n/a	chr10:18940564-18940575
17	ATF3	chr10:18940418-18940780	H1-hESC	embryonic stem cell:	n/a	chr10:18940564-18940575 chr10:18940566-18940574 chr10:18940563-18940576 chr10:18940564-18940577 chr10:18940564-18940575 chr10:18940563-18940574 chr10:18940566-18940576
18	ATF3	chr10:18940270-18940661	H1-hESC	embryonic stem cell:	n/a	chr10:18940564-18940575 chr10:18940566-18940574 chr10:18940563-18940576 chr10:18940564-18940577 chr10:18940564-18940575 chr10:18940563-18940574 chr10:18940566-18940576
19	ATF3	chr10:18940416-18940712	K562	blood:	n/a	chr10:18940564-18940575 chr10:18940566-18940574 chr10:18940563-18940574 chr10:18940564-18940575 chr10:18940566-18940576 chr10:18940563-18940576 chr10:18940564-18940577
20	ATF3	chr10:18948039-18948344	K562	blood:	n/a	chr10:18948067-18948080
21	BACH1	chr10:18947114-18947523	K562	blood:	n/a	n/a
22	BACH1	chr10:18947933-18948569	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr10:18940263-18940945	H1-hESC	embryonic stem cell:	n/a	n/a
24	BATF	chr10:18936097-18936340	GM12878	blood:	n/a	chr10:18936252-18936263
25	BATF	chr10:18947850-18948500	GM12878	blood:	n/a	n/a
26	BCL11A	chr10:18947941-18948280	GM12878	blood:	n/a	n/a
27	BCL11A	chr10:18947842-18948334	GM12878	blood:	n/a	n/a
28	BCL3	chr10:18940220-18940850	A549	lung:	n/a	chr10:18940556-18940565
29	BCL3	chr10:18947930-18948393	GM12878	blood:	n/a	n/a
30	BCL3	chr10:18971450-18971710	GM12878	blood:	n/a	n/a
31	BCLAF1	chr10:18947057-18949047	GM12878	blood:	n/a	chr10:18948541-18948554
32	BCLAF1	chr10:18947134-18948682	GM12878	blood:	n/a	chr10:18948541-18948554
33	BCLAF1	chr10:18940221-18940923	GM12878	blood:	n/a	chr10:18940556-18940565
34	BHLHE40	chr10:18939997-18940747	GM12878	blood:	n/a	n/a
35	BHLHE40	chr10:18947582-18948697	HepG2	liver:	n/a	chr10:18948527-18948543 chr10:18948516-18948532 chr10:18948547-18948563
36	BHLHE40	chr10:18947821-18948885	K562	blood:	n/a	chr10:18948527-18948543 chr10:18948516-18948532 chr10:18948547-18948563
37	BHLHE40	chr10:18947390-18949223	GM12878	blood:	n/a	chr10:18948527-18948543 chr10:18948516-18948532 chr10:18948547-18948563
38	BHLHE40	chr10:18940081-18941034	K562	blood:	n/a	n/a
39	BHLHE40	chr10:18946971-18947297	K562	blood:	n/a	n/a
40	BHLHE40	chr10:18947845-18948312	A549	lung:	n/a	n/a
41	BRCA1	chr10:18947958-18948341	H1-hESC	embryonic stem cell:	n/a	n/a
42	BRCA1	chr10:18940285-18940813	Hela-S3	cervix:	n/a	n/a
43	BRCA1	chr10:18947971-18948392	Hela-S3	cervix:	n/a	n/a
44	BRCA1	chr10:18940324-18940807	H1-hESC	embryonic stem cell:	n/a	n/a
45	BRCA1	chr10:18947891-18948529	HepG2	liver:	n/a	n/a
46	BRCA1	chr10:18940404-18940700	HepG2	liver:	n/a	n/a
47	CBX3	chr10:18947989-18948323	K562	blood:	n/a	n/a
48	CBX3	chr10:18947915-18948377	K562	blood:	n/a	n/a
49	CBX3	chr10:18940297-18940986	K562	blood:	n/a	n/a
50	CCNT2	chr10:18948018-18948810	K562	blood:	n/a	n/a

(count:1955 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:18940907-18940957	HCM	heart:	n/a
2	chr10:18948173-18948223	HUVEC	blood vessel:	n/a
3	chr10:18940650-18940700	Hela-S3	cervix:	n/a
4	chr10:18940907-18940957	HCM	heart:	n/a
5	chr10:18948173-18948223	HUVEC	blood vessel:	n/a
6	chr10:18940650-18940700	Hela-S3	cervix:	n/a
7	chr10:18948122-18948172	U87	brain:	n/a
8	chr10:18948217-18948267	NH-A	brain:	n/a
9	chr10:18938449-18938499	HCPEpiC	choroid plexus:	n/a
10	chr10:18948173-18948223	ECC-1	luminal epithelium:	n/a
11	chr10:18940606-18940656	HepG2	liver:	n/a
12	chr10:18948058-18948108	HPAEpiC	pulmonary alveolar:	n/a
13	chr10:18948196-18948246	HRCEpiC	kidney:	n/a
14	chr10:18948173-18948223	Hepatocyte	liver:	n/a
15	chr10:18971598-18971648	GM12892	blood:	n/a
16	chr10:18940625-18940675	HCT-116	colon:	n/a
17	chr10:18940758-18940808	AG04450	lung:	fetal
18	chr10:18938449-18938499	T-47D	breast:	n/a
19	chr10:18940347-18940397	HIPEpiC	eye:	n/a
20	chr10:18940347-18940397	BE2_C	brain:	n/a
21	chr10:18940728-18940778	BJ	skin:	n/a
22	chr10:18949123-18949173	U87	brain:	n/a
23	chr10:18948122-18948172	GM12878	blood:	n/a
24	chr10:18948217-18948267	HCF	heart:	n/a
25	chr10:18940404-18940454	Hela-S3	cervix:	n/a
26	chr10:18951159-18951209	NHDF-neo	bronchial:	n/a
27	chr10:18947857-18947907	H1-hESC	embryonic stem cell:	embryo
28	chr10:18943063-18943113	GM12892	blood:	n/a
29	chr10:18949123-18949173	HEK293	kidney:	embryo
30	chr10:18949123-18949173	MCF10A-Er-Src	breast:	n/a
31	chr10:18948122-18948172	GM06990	blood:	n/a
32	chr10:18940625-18940675	MCF-7	breast:	n/a
33	chr10:18940650-18940700	PFSK-1	brain:	n/a
34	chr10:18940625-18940675	HL-60	blood:	n/a
35	chr10:18938449-18938499	SAEC	small airway:	n/a
36	chr10:18948272-18948322	HAEpiC	amniotic membrane:	n/a
37	chr10:18948399-18948449	HRE	kidney:	n/a
38	chr10:18940758-18940808	HPAEpiC	pulmonary alveolar:	n/a
39	chr10:18948399-18948449	HEEpiC	esophagus:	n/a
40	chr10:18940907-18940957	U87	brain:	n/a
41	chr10:18940650-18940700	IMR90	lung:	fetal
42	chr10:18940326-18940376	NB4	blood:	n/a
43	chr10:18940907-18940957	HAEpiC	amniotic membrane:	n/a
44	chr10:18948399-18948449	Hela-S3	cervix:	n/a
45	chr10:18940732-18940782	PANC-1	pancreas:	n/a
46	chr10:18948217-18948267	HRPEpiC	eye:	n/a
47	chr10:18948272-18948322	HRPEpiC	eye:	n/a
48	chr10:18947857-18947907	ProgFib	skin:	n/a
49	chr10:18948173-18948223	MCF-7	breast:	n/a
50	chr10:18940732-18940782	HCT-116	colon:	n/a

(count:37 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:18962456..18966517-chr10:18966877..18973376,6	K562	blood:
2	chr10:18929573..18932544-chr10:18939226..18941814,2	MCF-7	breast:
3	chr10:18963187..18965874-chr10:21329596..21331869,2	K562	blood:
4	chr10:18956344..18959967-chr10:18962484..18965500,3	K562	blood:
5	chr10:18966816..18969348-chr10:18971030..18973085,3	K562	blood:
6	chr10:18962456..18966517-chr10:18966877..18973376,6	K562	blood:
7	chr10:18937279..18942257-chr10:18944156..18951752,16	MCF-7	breast:
8	chr10:18966816..18969348-chr10:18971030..18973085,3	K562	blood:
9	chr10:18938885..18940645-chr10:18967631..18969812,2	K562	blood:
10	chr10:18973620..18975663-chr10:18978657..18981110,2	K562	blood:
11	chr10:18969086..18970965-chr10:18973281..18975325,2	K562	blood:
12	chr10:18929497..18932239-chr10:18933812..18935882,2	MCF-7	breast:
13	chr10:18940688..18942837-chr10:18963626..18966243,2	K562	blood:
14	chr10:18962334..18963136-chr6:121821481..121822051,2	MCF-7	breast:
15	chr10:18927647..18933802-chr10:18937639..18941916,7	K562	blood:
16	chr10:18939570..18941733-chr6:27856904..27858914,2	MCF-7	breast:
17	chr10:18938647..18942217-chr10:18945513..18950534,9	MCF-7	breast:
18	chr10:18938647..18942217-chr10:18945513..18950534,9	MCF-7	breast:
19	chr10:18949169..18950743-chr10:20135931..20138598,2	MCF-7	breast:
20	chr10:18963664..18965385-chr10:18966665..18968377,2	K562	blood:
21	chr10:18947800..18949870-chr10:18951360..18954331,4	MCF-7	breast:
22	chr10:18946855..18949588-chr10:18956968..18958606,2	K562	blood:
23	chr10:18948661..18949540-chr10:18959468..18960122,2	K562	blood:
24	chr10:18956344..18959967-chr10:18962484..18965500,3	K562	blood:
25	chr10:18969086..18970965-chr10:18973281..18975325,2	K562	blood:
26	chr10:18929497..18932239-chr10:18933812..18935882,2	MCF-7	breast:
27	chr10:18946565..18950911-chr10:18951359..18956154,6	MCF-7	breast:
28	chr10:18940513..18941117-chr5:130599360..130600150,2	HCT-116	colon:
29	chr10:18937279..18942257-chr10:18944156..18951752,16	MCF-7	breast:
30	chr10:18933676..18935370-chr10:18939800..18942129,2	MCF-7	breast:
31	chr10:18940688..18942837-chr10:18963626..18966243,2	K562	blood:
32	chr10:18963664..18965385-chr10:18966665..18968377,2	K562	blood:
33	chr10:18909074..18910706-chr10:18949247..18951149,2	K562	blood:
34	chr10:18948661..18949540-chr10:18959468..18960122,2	K562	blood:
35	chr10:17271770..17274197-chr10:18946668..18948974,2	K562	blood:
36	chr10:18940149..18940965-chr9:130330975..130331954,2	Hela-S3	cervix:
37	chr10:18947486..18949622-chr7:100026064..100028896,2	MCF-7	breast:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NSUN6-2	chr10:18948161-18948214	ENSG00000152487.6
2	lnc-NSUN6-2	chr10:18948122-18948185	ENSG00000152487.5
3	lnc-NSUN6-2	chr10:18943782-18944104	ENSG00000152487.6
4	lnc-NSUN6-2	chr10:18947148-18947426	ENSG00000152487.5
5	lnc-NSUN6-2	chr10:18943480-18944104	ENSG00000152487.5
6	lnc-CACNB2-1	chr10:18967049-18970567	NONHSAT011652
7	lnc-ARL5B-1	chr10:18943545-18943952	ENSG00000246675
8	lnc-NSUN6-2	chr10:18948122-18948167	ENSG00000152487.5
9	lnc-NSUN6-2	chr10:18948161-18948196	ENSG00000152487.5
10	lnc-NSUN6-2	chr10:18940195-18940399	ENSG00000152487.5
11	lnc-NSUN6-2	chr10:18943793-18944104	ENSG00000152487.5
12	lnc-NSUN6-2	chr10:18948161-18948196	ENSG00000152487.5
13	lnc-NSUN6-2	chr10:18942213-18942388	ENSG00000152487.6
14	lnc-NSUN6-2	chr10:18943954-18944104	ENSG00000152487.5
15	lnc-NSUN6-2	chr10:18943617-18944104	ENSG00000152487.5
16	lnc-ARL5B-1	chr10:18941165-18942371	ENSG00000246675

No data

(count:5 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	ARL5B	hsa-miR-155-5p	chr10:18966199-18966220
2	ARL5B	hsa-miR-186-5p	chr10:18966498-18966519
3	ARL5B	hsa-miR-186-5p	chr10:18964868-18964889
4	ARL5B	hsa-miR-186-5p	chr10:18964466-18964488
5	ARL5B	hsa-miR-155-5p	chr10:18966213-18966219

Variant related genes	Relation type
ENSG00000271786	TF binding region
ARL5B	TF binding region
NSUN6	TF binding region
ARL5B-AS1	TF binding region
ENSG00000271786	CpG island
ARL5B	CpG island
NSUN6	CpG island
ARL5B-AS1	CpG island
ENSG00000197153	chromatin interactions
ENSG00000152487	chromatin interactions
ENSG00000078487	chromatin interactions
ENSG00000165997	chromatin interactions
ENSG00000229124	chromatin interactions
ENSG00000158985	chromatin interactions
ENSG00000241058	chromatin interactions
ENSG00000026025	chromatin interactions
ENSG00000136830	chromatin interactions
ENSG00000146834	chromatin interactions
LARP1B	miRNA target sites
ERCC3	miRNA target sites

Extended variants
information (count: 2013 )
Associated
traits (count: 41 )

Variant overlapped rSNPs/rCNVs (count:2013 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs1880682	chr10:18932172-18932173	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs545299941	chr10:18932198-18932199	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs149982924	chr10:18932207-18932208	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs145216854	chr10:18932223-18932224	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs114195422	chr10:18932254-18932255	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs374849600	chr10:18932261-18932262	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs142418554	chr10:18932273-18932274	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs377575458	chr10:18932287-18932288	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs17622520	chr10:18932297-18932298	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs182702197	chr10:18932300-18932301	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs10829070	chr10:18932306-18932307	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
12	rs532302674	chr10:18932307-18932308	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs551458093	chr10:18932336-18932337	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs16917589	chr10:18932347-18932348	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs569178269	chr10:18932348-18932349	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs529925143	chr10:18932376-18932377	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs534216393	chr10:18932378-18932379	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs188065849	chr10:18932445-18932446	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs566863857	chr10:18932497-18932498	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs1624297	chr10:18932538-18932539	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs553004546	chr10:18932583-18932584	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs533997530	chr10:18932592-18932593	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs117567694	chr10:18932602-18932603	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs538888513	chr10:18932606-18932607	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs149127778	chr10:18932612-18932613	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs1623426	chr10:18932630-18932631	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs557271876	chr10:18932644-18932645	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs146611741	chr10:18932664-18932665	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs542938935	chr10:18932688-18932689	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs11015306	chr10:18932702-18932703	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
31	rs572827656	chr10:18932703-18932704	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs117692927	chr10:18932740-18932741	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs11015307	chr10:18932743-18932744	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs192504161	chr10:18932781-18932782	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs544422075	chr10:18932805-18932806	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs182787439	chr10:18932851-18932852	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs556606349	chr10:18932854-18932855	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs556426506	chr10:18932857-18932858	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs530017333	chr10:18932873-18932874	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs548157875	chr10:18932885-18932886	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs567326744	chr10:18932894-18932895	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs528430092	chr10:18932919-18932920	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs11015312	chr10:18932953-18932954	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
44	rs537747819	chr10:18932969-18932970	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs538727532	chr10:18932978-18932979	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs34458668	chr10:18932987-18932988	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs188894534	chr10:18932991-18932992	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs569322299	chr10:18932992-18932993	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs536952180	chr10:18932997-18932998	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs554922740	chr10:18933006-18933007	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:41)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal cancer	21851588	CNVD
Intracranial aneurysm	16715129	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Myelofibrosis	22110671	CNVD
Multiple myeloma	16616336	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Epilepsy	22083797	CNVD
Olfactory neuroblastoma	18408657	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Chronic lymphocytic leukemia	21546498	CNVD

Chromatin state (count:2100 , 50 per page) page: 1 2 3 4 5 6 7 ... 42

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18905000-18938200	Weak transcription	Hela-S3	cervix
2	chr10:18916800-18935200	Weak transcription	K562	blood
3	chr10:18916800-18936200	Weak transcription	A549	lung
4	chr10:18916800-18937000	Weak transcription	GM12878-XiMat	blood
5	chr10:18916800-18938400	Weak transcription	HSMMtube	muscle
6	chr10:18916800-18939800	Weak transcription	Aorta	Aorta
7	chr10:18916800-18940200	Weak transcription	Spleen	Spleen
8	chr10:18917000-18932400	Weak transcription	Primary hematopoietic stem cells	blood
9	chr10:18917000-18932600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
10	chr10:18917000-18934200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr10:18917000-18934200	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr10:18917000-18934400	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr10:18917000-18934600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:18917000-18934600	Weak transcription	Fetal Brain Female	brain
15	chr10:18917000-18934800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr10:18917000-18934800	Weak transcription	Duodenum Mucosa	Duodenum
17	chr10:18917000-18935000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr10:18917000-18935000	Weak transcription	Primary T cells from cord blood	blood
19	chr10:18917000-18936800	Weak transcription	Brain Germinal Matrix	brain
20	chr10:18917000-18937200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
21	chr10:18917000-18937400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
22	chr10:18917000-18938000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
23	chr10:18917000-18938200	Weak transcription	Primary B cells from peripheral blood	blood
24	chr10:18917000-18938200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
25	chr10:18917000-18938200	Weak transcription	Cortex derived primary cultured neurospheres	brain
26	chr10:18917000-18938200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr10:18917000-18938200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr10:18917000-18938200	Weak transcription	Brain Angular Gyrus	brain
29	chr10:18917000-18938400	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr10:18917000-18938400	Weak transcription	Ovary	ovary
31	chr10:18917000-18938400	Weak transcription	Skeletal Muscle Male	skeletal muscle
32	chr10:18917000-18938400	Weak transcription	Skeletal Muscle Female	skeletal muscle
33	chr10:18917000-18938800	Weak transcription	HSMM	muscle
34	chr10:18917000-18939600	Weak transcription	Placenta	Placenta
35	chr10:18917000-18939800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
36	chr10:18917000-18940200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr10:18917000-18940200	Weak transcription	Lung	lung
38	chr10:18917200-18935600	Weak transcription	Primary T helper cells PMA-I stimulated	--
39	chr10:18917200-18937800	Weak transcription	Adipose Nuclei	Adipose
40	chr10:18921400-18939000	Weak transcription	Right Ventricle	heart
41	chr10:18922600-18939600	Weak transcription	Sigmoid Colon	Sigmoid Colon
42	chr10:18923200-18936600	Weak transcription	Fetal Brain Male	brain
43	chr10:18924800-18937800	Weak transcription	Fetal Lung	lung
44	chr10:18925200-18937600	Weak transcription	Fetal Heart	heart
45	chr10:18925200-18939200	Weak transcription	Stomach Smooth Muscle	stomach
46	chr10:18925600-18939400	Weak transcription	Brain Substantia Nigra	brain
47	chr10:18926000-18940200	Weak transcription	Small Intestine	intestine
48	chr10:18926200-18939200	Weak transcription	Fetal Kidney	kidney
49	chr10:18926400-18938600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr10:18926600-18938200	Weak transcription	NHEK	skin

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