Variant report

Variant	nsv467202
Chromosome Location	chr10:54735164-54830687
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:398)
CpG islands
(count:122)
Chromatin interactive
region (count:12)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:398 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:54812645-54812845	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:54766296-54767482	HepG2	liver:	n/a	n/a
3	ATF2	chr10:54782216-54782718	H1-hESC	embryonic stem cell:	n/a	n/a
4	ATF2	chr10:54782245-54782835	H1-hESC	embryonic stem cell:	n/a	n/a
5	BATF	chr10:54744003-54744201	GM12878	blood:	n/a	chr10:54744116-54744127
6	BATF	chr10:54743987-54744184	GM12878	blood:	n/a	chr10:54744116-54744127
7	BATF	chr10:54762789-54763089	GM12878	blood:	n/a	n/a
8	BCL11A	chr10:54782292-54782638	H1-hESC	embryonic stem cell:	n/a	n/a
9	BCL11A	chr10:54773034-54773276	GM12878	blood:	n/a	n/a
10	BCL11A	chr10:54828775-54829045	GM12878	blood:	n/a	n/a
11	BHLHE40	chr10:54752923-54753221	GM12878	blood:	n/a	n/a
12	BHLHE40	chr10:54744103-54744204	GM12878	blood:	n/a	n/a
13	BHLHE40	chr10:54789662-54789889	GM12878	blood:	n/a	n/a
14	BHLHE40	chr10:54766801-54767080	HepG2	liver:	n/a	n/a
15	BHLHE40	chr10:54782709-54782744	GM12878	blood:	n/a	n/a
16	BHLHE40	chr10:54765171-54765964	GM12878	blood:	n/a	chr10:54765555-54765568 chr10:54765557-54765566 chr10:54765556-54765565 chr10:54765551-54765572
17	BHLHE40	chr10:54828892-54829105	GM12878	blood:	n/a	n/a
18	BHLHE40	chr10:54772825-54773371	GM12878	blood:	n/a	n/a
19	CEBPB	chr10:54798974-54799011	IMR90	lung:	n/a	chr10:54798994-54799005 chr10:54798993-54799006 chr10:54798978-54798989
20	CEBPB	chr10:54739101-54739452	HepG2	liver:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
21	CEBPB	chr10:54736055-54736340	MCF-7	breast:	n/a	chr10:54736178-54736189
22	CEBPB	chr10:54766710-54767059	HepG2	liver:	n/a	n/a
23	CEBPB	chr10:54739135-54739420	H1-hESC	embryonic stem cell:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
24	CEBPB	chr10:54739108-54739602	Hela-S3	cervix:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
25	CEBPB	chr10:54736049-54736364	A549	lung:	n/a	chr10:54736178-54736189
26	CEBPB	chr10:54736026-54736346	HepG2	liver:	n/a	chr10:54736178-54736189
27	CEBPB	chr10:54790215-54790565	IMR90	lung:	n/a	n/a
28	CEBPB	chr10:54802424-54802606	IMR90	lung:	n/a	n/a
29	CEBPB	chr10:54812569-54812835	HepG2	liver:	n/a	n/a
30	CEBPB	chr10:54757916-54758087	HepG2	liver:	n/a	n/a
31	CEBPB	chr10:54806095-54806330	HepG2	liver:	n/a	chr10:54806203-54806216 chr10:54806204-54806215 chr10:54806203-54806214 chr10:54806203-54806216
32	CEBPB	chr10:54802374-54802596	HepG2	liver:	n/a	chr10:54802395-54802407
33	CEBPB	chr10:54798877-54799130	HepG2	liver:	n/a	chr10:54798994-54799005 chr10:54798993-54799006 chr10:54798978-54798989
34	CEBPB	chr10:54739186-54739365	MCF-7	breast:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
35	CEBPB	chr10:54736031-54736360	IMR90	lung:	n/a	chr10:54736178-54736189
36	CEBPB	chr10:54739118-54739626	IMR90	lung:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
37	CEBPB	chr10:54739102-54739456	A549	lung:	n/a	chr10:54739271-54739284 chr10:54739272-54739283
38	CHD1	chr10:54828900-54828903	GM12878	blood:	n/a	n/a
39	CHD2	chr10:54789549-54789899	GM12878	blood:	n/a	n/a
40	CHD2	chr10:54828795-54829022	GM12878	blood:	n/a	n/a
41	CHD2	chr10:54812157-54812247	HepG2	liver:	n/a	n/a
42	CTCF	chr10:54820034-54820118	GM20000	blood:	n/a	n/a
43	CTCF	chr10:54782440-54782590	Caco-2	colon:	n/a	n/a
44	CTCF	chr10:54788566-54788619	Kidney_OC	kidney:	n/a	n/a
45	CTCF	chr10:54788549-54788553	Kidney_OC	kidney:	n/a	n/a
46	CTCF	chr10:54788534-54788584	HepG2	liver:	n/a	n/a
47	CTCF	chr10:54782680-54782830	Caco-2	colon:	n/a	n/a
48	CTCF	chr10:54799346-54799409	GM10248	blood:	n/a	n/a
49	CTCF	chr10:54795020-54795170	GM12869	blood:	n/a	n/a
50	CTCF	chr10:54788501-54788615	GM19238	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:54759379-54759429	Hela-S3	cervix:	n/a
2	chr10:54759379-54759429	AG10803	skin:	n/a
3	chr10:54782631-54782681	Hela-S3	cervix:	n/a
4	chr10:54759379-54759429	RPTEC	kidney:	n/a
5	chr10:54782631-54782681	GM06990	blood:	n/a
6	chr10:54782631-54782681	ovcar-3	ovarian:	n/a
7	chr10:54782631-54782681	HEK293	kidney:	embryo
8	chr10:54782631-54782681	PFSK-1	brain:	n/a
9	chr10:54759379-54759429	HNPCEpiC	eye:	n/a
10	chr10:54782631-54782681	GM12878	blood:	n/a
11	chr10:54782631-54782681	MCF10A-Er-Src	breast:	n/a
12	chr10:54759379-54759429	NT2-D1	testis:	n/a
13	chr10:54782631-54782681	SK-N-SH	brain:	n/a
14	chr10:54782631-54782681	HRCEpiC	kidney:	n/a
15	chr10:54759379-54759429	HUVEC	blood vessel:	n/a
16	chr10:54759379-54759429	A549	lung:	n/a
17	chr10:54782631-54782681	HCF	heart:	n/a
18	chr10:54782631-54782681	HEEpiC	esophagus:	n/a
19	chr10:54759379-54759429	GM06990	blood:	n/a
20	chr10:54759379-54759429	NHBE	bronchial:	n/a
21	chr10:54782631-54782681	RPTEC	kidney:	n/a
22	chr10:54759379-54759429	HRPEpiC	eye:	n/a
23	chr10:54759379-54759429	H1-hESC	embryonic stem cell:	embryo
24	chr10:54782631-54782681	HCM	heart:	n/a
25	chr10:54759379-54759429	HL-60	blood:	n/a
26	chr10:54782631-54782681	ECC-1	luminal epithelium:	n/a
27	chr10:54782631-54782681	HRE	kidney:	n/a
28	chr10:54782631-54782681	SKMC	muscle:	n/a
29	chr10:54782631-54782681	NT2-D1	testis:	n/a
30	chr10:54782631-54782681	AoSMC	blood vessel:	n/a
31	chr10:54759379-54759429	AG04450	lung:	fetal
32	chr10:54759379-54759429	AG09309	skin:	n/a
33	chr10:54759379-54759429	ProgFib	skin:	n/a
34	chr10:54782631-54782681	AG09319	gingival:	n/a
35	chr10:54759379-54759429	HIPEpiC	eye:	n/a
36	chr10:54782631-54782681	HRPEpiC	eye:	n/a
37	chr10:54759379-54759429	HCF	heart:	n/a
38	chr10:54759379-54759429	GM12891	blood:	n/a
39	chr10:54759379-54759429	SK-N-SH_RA	brain:	n/a
40	chr10:54759379-54759429	SKMC	muscle:	n/a
41	chr10:54782631-54782681	GM12892	blood:	n/a
42	chr10:54759379-54759429	PFSK-1	brain:	n/a
43	chr10:54782631-54782681	PANC-1	pancreas:	n/a
44	chr10:54759379-54759429	NB4	blood:	n/a
45	chr10:54782631-54782681	HCPEpiC	choroid plexus:	n/a
46	chr10:54759379-54759429	ECC-1	luminal epithelium:	n/a
47	chr10:54759379-54759429	LNCaP	prostate:	n/a
48	chr10:54759379-54759429	IMR90	lung:	fetal
49	chr10:54759379-54759429	K562	blood:	n/a
50	chr10:54782631-54782681	BE2_C	brain:	n/a

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:54782310..54784916-chr10:54787401..54789318,3	MCF-7	breast:
2	chr10:54752964..54755249-chr10:54757261..54758818,2	K562	blood:
3	chr10:54769210..54771714-chr10:54777628..54779140,2	K562	blood:
4	chr10:54764008..54766836-chr10:54772750..54774326,2	K562	blood:
5	chr10:54782310..54784916-chr10:54787401..54789318,3	MCF-7	breast:
6	chr10:54769210..54771714-chr10:54777628..54779140,2	K562	blood:
7	chr10:54767534..54770532-chr10:54779157..54781249,2	K562	blood:
8	chr10:54752964..54755249-chr10:54757261..54758818,2	K562	blood:
9	chr10:54793499..54796412-chr10:54801093..54803641,2	MCF-7	breast:
10	chr10:54767534..54770532-chr10:54779157..54781249,2	K562	blood:
11	chr10:54793499..54796412-chr10:54801093..54803641,2	MCF-7	breast:
12	chr10:54764008..54766836-chr10:54772750..54774326,2	K562	blood:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MBL2-2	chr10:54782584-54782720	NONHSAT013446
2	lnc-DKK1-3	chr10:54798045-54798304	NONHSAT013449
3	lnc-MBL2-2	chr10:54735500-54735573	XLOC_008826
4	lnc-MBL2-2	chr10:54789671-54789855	XLOC_008826
5	lnc-MBL2-8	chr10:54740758-54740831	NONHSAT013440
6	lnc-MBL2-2	chr10:54782584-54782720	XLOC_008826
7	lnc-MBL2-2	chr10:54789652-54790030	XLOC_008826
8	lnc-MBL2-2	chr10:54735430-54735573	XLOC_008826
9	lnc-MBL2-2	chr10:54782584-54782768	XLOC_008826
10	lnc-MBL2-2	chr10:54762812-54762923	NONHSAT013446
11	lnc-MBL2-2	chr10:54785024-54785887	XLOC_008826
12	lnc-MBL2-2	chr10:54789671-54789810	NONHSAT013446
13	lnc-MBL2-2	chr10:54735500-54735573	XLOC_008826
14	lnc-MBL2-2	chr10:54782584-54782720	XLOC_008826
15	lnc-MBL2-2	chr10:54789671-54789884	XLOC_008826
16	lnc-MBL2-2	chr10:54735500-54735575	XLOC_008826

No data

Variant related genes	Relation type
SNRPEP8	TF binding region
ENSG00000227121	TF binding region
SNRPEP8	CpG island
ENSG00000227121	CpG island
MYB	miRNA target sites
PBX2	miRNA target sites
CNOT10	miRNA target sites

Extended variants
information (count: 2667 )
Associated
traits (count: 67 )

Variant overlapped rSNPs/rCNVs (count:2667 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11003300	chr10:54735164-54735165	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs536662185	chr10:54735212-54735213	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs188845961	chr10:54735248-54735249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs542472071	chr10:54735257-54735258	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs149949362	chr10:54735273-54735274	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs567126382	chr10:54735301-54735302	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs536991496	chr10:54735330-54735331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs559221246	chr10:54735363-54735364	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs553693072	chr10:54735374-54735375	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs193058688	chr10:54735440-54735441	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
11	rs539188562	chr10:54735464-54735465	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs559110805	chr10:54735480-54735481	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
13	rs575727806	chr10:54735482-54735483	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs114045615	chr10:54735495-54735496	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs4622164	chr10:54735547-54735548	Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs541692204	chr10:54735558-54735559	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
17	rs539886731	chr10:54735568-54735569	Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
18	rs4564234	chr10:54735599-54735600	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs574683007	chr10:54735608-54735609	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs543556875	chr10:54735615-54735616	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs73348300	chr10:54735616-54735617	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs563396012	chr10:54735657-54735658	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs528289770	chr10:54735676-54735677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs551125180	chr10:54735687-54735688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs4589197	chr10:54735702-54735703	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs4636566	chr10:54735716-54735717	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs143274809	chr10:54735794-54735795	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs4611108	chr10:54735799-54735800	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs184195181	chr10:54735808-54735809	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs547319360	chr10:54735827-54735828	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs187496628	chr10:54735848-54735849	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs548424708	chr10:54735878-54735879	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs146710104	chr10:54735920-54735921	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs78676972	chr10:54735928-54735929	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs575747539	chr10:54735934-54735935	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs114059475	chr10:54735979-54735980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs548493888	chr10:54735991-54735992	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs554728735	chr10:54736123-54736124	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs191376661	chr10:54736145-54736146	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs540207353	chr10:54736208-54736209	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs183817508	chr10:54736307-54736308	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs572834427	chr10:54736314-54736315	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs544878372	chr10:54736322-54736323	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs565131792	chr10:54736323-54736324	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs527684682	chr10:54736385-54736386	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs530609374	chr10:54736396-54736397	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs188502437	chr10:54736415-54736416	Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs1343049	chr10:54736423-54736424	Flanking Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs1343050	chr10:54736435-54736436	Flanking Active TSS Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs74231976	chr10:54736461-54736462	Flanking Active TSS Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:67)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Obesity	21956041	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Intellectual disability	21948486	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21364760	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16272173	CNVD
Metanephric adenoma	20802469	CNVD
Autism	20841430	CNVD
Mental retardation	17124404	CNVD
Epilepsy	20923578	CNVD
Prostate cancer	16573809	CNVD
Schizophrenia	19329560	CNVD
Heart failure	18772530	CNVD
Heart failure	18854381	CNVD
Hyperglycemia	19060297	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Glioblastoma multiforme	22286061	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Usher syndrome	20538994	CNVD
Glioblastoma multiforme	17002787	CNVD
Colorectal cancer	16774939	CNVD
Autism	20858243	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:417 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:54729000-54737200	Weak transcription	Fetal Intestine Large	intestine
2	chr10:54734600-54764600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr10:54735000-54735200	Enhancers	Fetal Intestine Small	intestine
4	chr10:54735200-54737000	Weak transcription	Fetal Intestine Small	intestine
5	chr10:54736200-54736400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr10:54736400-54736600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr10:54736600-54736800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr10:54736800-54737000	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr10:54736800-54737600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr10:54737000-54737400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr10:54737000-54738000	Enhancers	Fetal Intestine Small	intestine
12	chr10:54737000-54738000	Enhancers	Stomach Mucosa	stomach
13	chr10:54737200-54737800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr10:54737200-54738000	Enhancers	Fetal Intestine Large	intestine
15	chr10:54737200-54738000	Enhancers	Gastric	stomach
16	chr10:54737600-54743200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr10:54746000-54746400	Enhancers	Fetal Intestine Large	intestine
18	chr10:54750200-54755600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr10:54752200-54752600	Enhancers	iPS-20b Cell Line	embryonic stem cell
20	chr10:54752400-54753000	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr10:54752600-54756800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr10:54753000-54756800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
23	chr10:54755600-54755800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr10:54755800-54756400	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
25	chr10:54755800-54756400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr10:54755800-54764400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr10:54756200-54756400	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
28	chr10:54756400-54759000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
29	chr10:54756400-54759200	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr10:54756800-54757200	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
31	chr10:54756800-54757200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
32	chr10:54757000-54757200	Enhancers	HUES48 Cell Line	embryonic stem cell
33	chr10:54757200-54757800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
34	chr10:54757200-54759000	Weak transcription	HUES48 Cell Line	embryonic stem cell
35	chr10:54757200-54766400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr10:54757600-54757800	Enhancers	Liver	Liver
37	chr10:54757800-54758200	Enhancers	Monocytes-CD14+_RO01746	blood
38	chr10:54757800-54759600	Flanking Active TSS	Liver	Liver
39	chr10:54757800-54760800	Enhancers	HepG2	liver
40	chr10:54758200-54759800	Enhancers	HUES64 Cell Line	embryonic stem cell
41	chr10:54758200-54762800	Weak transcription	Monocytes-CD14+_RO01746	blood
42	chr10:54759000-54759600	Enhancers	HUES48 Cell Line	embryonic stem cell
43	chr10:54759000-54760200	Enhancers	iPS-18 Cell Line	embryonic stem cell
44	chr10:54759000-54760800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
45	chr10:54759200-54759400	Enhancers	H1 Cell Line	embryonic stem cell
46	chr10:54759200-54759400	Enhancers	HUES6 Cell Line	embryonic stem cell
47	chr10:54759400-54760600	Weak transcription	HUES6 Cell Line	embryonic stem cell
48	chr10:54759600-54760200	Enhancers	Stomach Mucosa	stomach
49	chr10:54759600-54760800	Enhancers	Liver	Liver
50	chr10:54759800-54767200	Weak transcription	HUES64 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links