Variant report

Variant	nsv467455
Chromosome Location	chr10:112579299-112612471
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:763)
CpG islands
(count:305)
Chromatin interactive
region (count:71)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:763 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:112612000-112612300	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:112605564-112606070	HepG2	liver:	n/a	n/a
3	ARID3A	chr10:112587259-112587546	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:112593300-112593472	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:112593771-112593775	HepG2	liver:	n/a	n/a
6	ATF2	chr10:112601330-112602071	GM12878	blood:	n/a	n/a
7	ATF2	chr10:112601359-112603359	GM12878	blood:	n/a	n/a
8	ATF2	chr10:112602295-112603286	GM12878	blood:	n/a	n/a
9	BACH1	chr10:112582823-112582896	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr10:112596097-112596294	H1-hESC	embryonic stem cell:	n/a	n/a
11	BATF	chr10:112601504-112601902	GM12878	blood:	n/a	chr10:112601697-112601708
12	BATF	chr10:112611888-112612356	GM12878	blood:	n/a	chr10:112612133-112612144
13	BATF	chr10:112611986-112612276	GM12878	blood:	n/a	chr10:112612133-112612144
14	BATF	chr10:112601442-112601959	GM12878	blood:	n/a	chr10:112601697-112601708
15	BATF	chr10:112602795-112603212	GM12878	blood:	n/a	n/a
16	BCL11A	chr10:112601551-112601852	GM12878	blood:	n/a	chr10:112601823-112601832
17	BCL11A	chr10:112601483-112602008	GM12878	blood:	n/a	chr10:112601823-112601832
18	BCL11A	chr10:112602801-112603100	GM12878	blood:	n/a	chr10:112602982-112602991
19	BCL11A	chr10:112602725-112603241	GM12878	blood:	n/a	chr10:112602982-112602991
20	BCL3	chr10:112602734-112603280	GM12878	blood:	n/a	chr10:112602982-112602991
21	BCL3	chr10:112601455-112602043	GM12878	blood:	n/a	chr10:112601823-112601832
22	BCL3	chr10:112590760-112591071	GM12878	blood:	n/a	n/a
23	BCL3	chr10:112602830-112603172	GM12878	blood:	n/a	chr10:112602982-112602991
24	BCL3	chr10:112601548-112602013	GM12878	blood:	n/a	chr10:112601823-112601832
25	BCLAF1	chr10:112601437-112603251	GM12878	blood:	n/a	chr10:112602982-112602991 chr10:112601823-112601832 chr10:112602157-112602165
26	BCLAF1	chr10:112601304-112603341	GM12878	blood:	n/a	chr10:112602982-112602991 chr10:112601823-112601832 chr10:112602157-112602165
27	BHLHE40	chr10:112612024-112612480	HepG2	liver:	n/a	n/a
28	BHLHE40	chr10:112583244-112583375	GM12878	blood:	n/a	n/a
29	BHLHE40	chr10:112602330-112603353	GM12878	blood:	n/a	chr10:112602875-112602891
30	BHLHE40	chr10:112601466-112601968	GM12878	blood:	n/a	n/a
31	BHLHE40	chr10:112604021-112604251	HepG2	liver:	n/a	n/a
32	BHLHE40	chr10:112581633-112582191	K562	blood:	n/a	n/a
33	BHLHE40	chr10:112609868-112610248	GM12878	blood:	n/a	n/a
34	BRCA1	chr10:112601775-112601975	GM12878	blood:	n/a	n/a
35	BRCA1	chr10:112612196-112612313	GM12878	blood:	n/a	n/a
36	CBX3	chr10:112611866-112612659	HCT-116	colon:	n/a	n/a
37	CEBPB	chr10:112600147-112600780	HepG2	liver:	n/a	chr10:112600640-112600651
38	CEBPB	chr10:112602294-112603423	GM12878	blood:	n/a	chr10:112602671-112602684
39	CEBPB	chr10:112602965-112603151	HepG2	liver:	n/a	n/a
40	CEBPB	chr10:112583628-112583999	HepG2	liver:	n/a	chr10:112583806-112583817
41	CEBPB	chr10:112599937-112600775	MCF-7	breast:	n/a	chr10:112600640-112600651
42	CEBPB	chr10:112583663-112583949	K562	blood:	n/a	chr10:112583806-112583817
43	CEBPB	chr10:112610290-112610549	A549	lung:	n/a	chr10:112610395-112610406 chr10:112610447-112610458
44	CEBPB	chr10:112600543-112600667	K562	blood:	n/a	chr10:112600640-112600651
45	CEBPB	chr10:112583666-112584042	MCF-7	breast:	n/a	chr10:112583806-112583817
46	CEBPB	chr10:112599983-112600854	MCF-7	breast:	n/a	chr10:112600640-112600651
47	CEBPB	chr10:112582245-112582811	ECC-1	luminal epithelium:	n/a	n/a
48	CEBPB	chr10:112582398-112582686	ECC-1	luminal epithelium:	n/a	n/a
49	CEBPB	chr10:112602897-112603173	GM12878	blood:	n/a	n/a
50	CEBPB	chr10:112583553-112584085	MCF-7	breast:	n/a	chr10:112583806-112583817

(count:305 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:112594670-112594720	GM06990	blood:	n/a
2	chr10:112582591-112582641	LNCaP	prostate:	n/a
3	chr10:112594670-112594720	GM12892	blood:	n/a
4	chr10:112598561-112598611	GM19239	blood:	n/a
5	chr10:112598561-112598611	T-47D	breast:	n/a
6	chr10:112598561-112598611	NB4	blood:	n/a
7	chr10:112594670-112594720	AG09319	gingival:	n/a
8	chr10:112588051-112588101	U87	brain:	n/a
9	chr10:112598561-112598611	AG09319	gingival:	n/a
10	chr10:112594670-112594720	NHDF-neo	bronchial:	n/a
11	chr10:112580109-112580159	Caco-2	colon:	n/a
12	chr10:112598561-112598611	HNPCEpiC	eye:	n/a
13	chr10:112580109-112580159	NH-A	brain:	n/a
14	chr10:112594670-112594720	H1-hESC	embryonic stem cell:	embryo
15	chr10:112580109-112580159	HMEC	breast:	n/a
16	chr10:112598561-112598611	Hepatocyte	liver:	n/a
17	chr10:112582591-112582641	NT2-D1	testis:	n/a
18	chr10:112582591-112582641	HUVEC	blood vessel:	n/a
19	chr10:112580109-112580159	HRCEpiC	kidney:	n/a
20	chr10:112598561-112598611	GM12878	blood:	n/a
21	chr10:112580109-112580159	BE2_C	brain:	n/a
22	chr10:112594670-112594720	NT2-D1	testis:	n/a
23	chr10:112594670-112594720	GM19239	blood:	n/a
24	chr10:112598561-112598611	HCPEpiC	choroid plexus:	n/a
25	chr10:112582591-112582641	HRCEpiC	kidney:	n/a
26	chr10:112582591-112582641	A549	lung:	n/a
27	chr10:112588051-112588101	HRPEpiC	eye:	n/a
28	chr10:112588051-112588101	PrEC	prostate:	n/a
29	chr10:112582591-112582641	Caco-2	colon:	n/a
30	chr10:112582591-112582641	HCT-116	colon:	n/a
31	chr10:112594670-112594720	SK-N-SH	brain:	n/a
32	chr10:112594670-112594720	HIPEpiC	eye:	n/a
33	chr10:112580109-112580159	HCPEpiC	choroid plexus:	n/a
34	chr10:112594670-112594720	HepG2	liver:	n/a
35	chr10:112582591-112582641	SK-N-SH_RA	brain:	n/a
36	chr10:112580109-112580159	PANC-1	pancreas:	n/a
37	chr10:112580109-112580159	SK-N-MC	brain:	n/a
38	chr10:112582591-112582641	T-47D	breast:	n/a
39	chr10:112594670-112594720	HRE	kidney:	n/a
40	chr10:112580109-112580159	Jurkat	blood:	n/a
41	chr10:112594670-112594720	HCT-116	colon:	n/a
42	chr10:112594670-112594720	HRCEpiC	kidney:	n/a
43	chr10:112594670-112594720	CMK	blood:	n/a
44	chr10:112588051-112588101	BJ	skin:	n/a
45	chr10:112594670-112594720	HCM	heart:	n/a
46	chr10:112580109-112580159	HIPEpiC	eye:	n/a
47	chr10:112580109-112580159	CMK	blood:	n/a
48	chr10:112588051-112588101	HMEC	breast:	n/a
49	chr10:112594670-112594720	ovcar-3	ovarian:	n/a
50	chr10:112580109-112580159	SK-N-SH	brain:	n/a

(count:71 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:112603039..112604756-chr10:112609878..112611950,2	MCF-7	breast:
2	chr10:112580829..112583649-chr10:112594219..112597550,3	MCF-7	breast:
3	chr10:112602080..112604237-chr10:112611419..112615912,4	K562	blood:
4	chr10:112598132..112600634-chr10:112617601..112619746,2	MCF-7	breast:
5	chr10:112610748..112613703-chr10:112623981..112626805,2	MCF-7	breast:
6	chr10:112604597..112607623-chr10:112608052..112611214,4	K562	blood:
7	chr10:112562895..112564656-chr10:112578685..112581369,2	K562	blood:
8	chr10:112604453..112606201-chr10:112652367..112654040,2	MCF-7	breast:
9	chr10:112596969..112605726-chr10:112629736..112633505,15	MCF-7	breast:
10	chr10:112580755..112589346-chr10:112627817..112636075,27	MCF-7	breast:
11	chr10:112589697..112592145-chr10:112622610..112625288,3	MCF-7	breast:
12	chr10:112578333..112580115-chr10:112582866..112584934,2	MCF-7	breast:
13	chr10:112603039..112604756-chr10:112609878..112611950,2	MCF-7	breast:
14	chr10:112604056..112607553-chr10:112607737..112614942,9	MCF-7	breast:
15	chr10:112580829..112583649-chr10:112594219..112597550,3	MCF-7	breast:
16	chr10:112604597..112607623-chr10:112608052..112611214,4	K562	blood:
17	chr10:112579505..112583802-chr10:112587400..112591373,5	MCF-7	breast:
18	chr10:112595142..112598000-chr10:112598857..112603163,4	MCF-7	breast:
19	chr10:112595791..112597463-chr10:112601395..112603018,2	K562	blood:
20	chr10:112549532..112550516-chr10:112578928..112579711,2	MCF-7	breast:
21	chr10:112582382..112584643-chr10:112585377..112589388,5	MCF-7	breast:
22	chr10:112606555..112610300-chr10:112611947..112614972,3	MCF-7	breast:
23	chr10:112582382..112584643-chr10:112585377..112589388,5	MCF-7	breast:
24	chr10:112549259..112549970-chr10:112582484..112583040,3	MCF-7	breast:
25	chr10:112595791..112597463-chr10:112601395..112603018,2	K562	blood:
26	chr10:112580700..112582499-chr10:112597516..112599127,2	K562	blood:
27	chr10:112579419..112581371-chr10:112586517..112588214,2	K562	blood:
28	chr10:112612441..112615038-chr10:112661869..112664836,2	K562	blood:
29	chr10:112590942..112593202-chr10:112597730..112600169,3	MCF-7	breast:
30	chr10:112585315..112587838-chr10:112602410..112605379,2	MCF-7	breast:
31	chr10:112549259..112549898-chr10:112582484..112583025,2	MCF-7	breast:
32	chr10:112595142..112598000-chr10:112598857..112603163,4	MCF-7	breast:
33	chr10:112586696..112589138-chr10:112631404..112633158,2	K562	blood:
34	chr10:112582540..112585422-chr10:112589787..112595688,6	MCF-7	breast:
35	chr10:112582341..112584834-chr10:112598751..112600508,2	MCF-7	breast:
36	chr10:112590942..112593202-chr10:112597730..112600169,3	MCF-7	breast:
37	chr10:112505831..112506716-chr10:112582048..112582634,2	MCF-7	breast:
38	chr10:112598046..112602437-chr10:112602473..112607485,6	MCF-7	breast:
39	chr10:112587964..112590825-chr10:112590840..112592788,2	K562	blood:
40	chr10:112604056..112607553-chr10:112607737..112614942,9	MCF-7	breast:
41	chr10:112591605..112593226-chr10:112610703..112612547,2	MCF-7	breast:
42	chr10:112590158..112593490-chr10:112605615..112607269,3	K562	blood:
43	chr10:112587964..112590825-chr10:112590840..112592788,2	K562	blood:
44	chr10:112578050..112579820-chr10:112631162..112632921,2	MCF-7	breast:
45	chr10:112603838..112606492-chr10:112617289..112618833,2	MCF-7	breast:
46	chr10:112549374..112550165-chr10:112603700..112604517,2	MCF-7	breast:
47	chr10:112598046..112602437-chr10:112602473..112607485,6	MCF-7	breast:
48	chr10:112582463..112585144-chr10:112603748..112605895,2	MCF-7	breast:
49	chr10:112606555..112610300-chr10:112611947..112614972,3	MCF-7	breast:
50	chr10:112549335..112552325-chr10:112591675..112594446,2	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PDCD4-2	chr10:112583346-112583372	NONHSAT016359
2	lnc-PDCD4-2	chr10:112590819-112591271	NONHSAT016359

No data

Variant related genes	Relation type
RBM20	TF binding region
RBM20	CpG island
ENSG00000232470	chromatin interactions
ENSG00000150593	chromatin interactions
ENSG00000214413	chromatin interactions
ENSG00000203497	chromatin interactions
ENSG00000203867	chromatin interactions

Extended variants
information (count: 1316 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:1316 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7072681	chr10:112579299-112579300	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs192745469	chr10:112579300-112579301	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
3	rs551690020	chr10:112579319-112579320	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs540729315	chr10:112579369-112579370	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs75028078	chr10:112579401-112579402	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs183127883	chr10:112579456-112579457	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs546635260	chr10:112579461-112579462	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs568054427	chr10:112579474-112579475	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs542530770	chr10:112579482-112579483	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs535584242	chr10:112579543-112579544	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs550287622	chr10:112579567-112579568	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs568871135	chr10:112579583-112579584	Weak transcription Enhancers	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs376804681	chr10:112579615-112579616	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs113875129	chr10:112579630-112579631	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs11195343	chr10:112579663-112579664	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs558103165	chr10:112579697-112579698	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs573025329	chr10:112579706-112579707	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs534885023	chr10:112579715-112579716	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs577745172	chr10:112579717-112579718	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs138457669	chr10:112579749-112579750	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs555574999	chr10:112579775-112579776	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs143080581	chr10:112579791-112579792	Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs376071070	chr10:112579830-112579831	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs397516603	chr10:112579844-112579845	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs367791037	chr10:112579866-112579867	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs371589179	chr10:112579897-112579898	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs368291152	chr10:112579912-112579913	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs187915202	chr10:112579949-112579950	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs560823172	chr10:112579967-112579968	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs577630555	chr10:112580074-112580075	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs545250754	chr10:112580100-112580101	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs113150919	chr10:112580113-112580114	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs560424732	chr10:112580114-112580115	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs369397500	chr10:112580118-112580119	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs145176184	chr10:112580121-112580122	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs549308620	chr10:112580132-112580133	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs561559846	chr10:112580169-112580170	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs528967451	chr10:112580170-112580171	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs574329267	chr10:112580222-112580223	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs370070455	chr10:112580258-112580259	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs370803301	chr10:112580260-112580261	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs141542950	chr10:112580269-112580270	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs568845443	chr10:112580321-112580322	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs77568383	chr10:112580355-112580356	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs561615397	chr10:112580423-112580424	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs551659391	chr10:112580456-112580457	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs566760763	chr10:112580465-112580466	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs60838227	chr10:112580466-112580467	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs555249827	chr10:112580543-112580544	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs12245520	chr10:112580557-112580558	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS	TF binding region Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21785460	CNVD
Acute myeloid leukemia	20729466	CNVD
Paraganglioma	17535989	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Pulmonary chondroma	17535989	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Glioblastoma multiforme	17387387	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	16608533	CNVD
small cell lung cancer	20016488	CNVD
Glioblastoma multiforme	17002787	CNVD
Breast cancer	17393978	CNVD
Ovarian cancer	21720365	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myxofibrosarcoma	16751306	CNVD
Cornelia de Lange syndrome	24599119	CNVD
T-cell lymphomas	19863542	CNVD
Breast cancer	16397240	CNVD
Urothelial carcinoma	21177765	CNVD
Multiple myeloma	16616336	CNVD
Chronic lymphocytic leukemia	18645599	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	21509527	CNVD
Barrett''s syndrome	19417022	CNVD
Sezary syndrome	18413736	CNVD
Cornelia de Lange syndrome	21085971	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1158 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:112564000-112581600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr10:112572600-112593800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr10:112572800-112581400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr10:112572800-112582200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr10:112573400-112580800	Weak transcription	K562	blood
6	chr10:112575000-112579800	Enhancers	Stomach Smooth Muscle	stomach
7	chr10:112575200-112582400	Enhancers	Esophagus	oesophagus
8	chr10:112575400-112579400	Genic enhancers	Left Ventricle	heart
9	chr10:112575400-112581400	Enhancers	Fetal Muscle Leg	muscle
10	chr10:112575800-112583600	Enhancers	Right Atrium	heart
11	chr10:112576000-112579800	Enhancers	Skeletal Muscle Female	skeletal muscle
12	chr10:112576000-112580000	Weak transcription	Lung	lung
13	chr10:112576200-112583200	Enhancers	Pancreas	Pancrea
14	chr10:112576600-112580600	Enhancers	Stomach Mucosa	stomach
15	chr10:112576800-112580600	Enhancers	Rectal Smooth Muscle	rectum
16	chr10:112576800-112584800	Enhancers	Psoas Muscle	Psoas
17	chr10:112577000-112579800	Weak transcription	Spleen	Spleen
18	chr10:112577200-112590800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr10:112577400-112579400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr10:112577400-112580400	Enhancers	Sigmoid Colon	Sigmoid Colon
21	chr10:112577400-112580600	Enhancers	Rectal Mucosa Donor 29	rectum
22	chr10:112577400-112581000	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr10:112577400-112584800	Enhancers	Fetal Stomach	stomach
24	chr10:112577600-112579600	Enhancers	Skeletal Muscle Male	skeletal muscle
25	chr10:112577600-112579800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr10:112577600-112580000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr10:112577600-112583000	Enhancers	Adipose Nuclei	Adipose
28	chr10:112577800-112582400	Weak transcription	Primary B cells from peripheral blood	blood
29	chr10:112577800-112582400	Enhancers	Right Ventricle	heart
30	chr10:112577800-112593400	Weak transcription	Thymus	Thymus
31	chr10:112578000-112580400	Enhancers	Colonic Mucosa	Colon
32	chr10:112578000-112580400	Enhancers	Duodenum Mucosa	Duodenum
33	chr10:112578000-112580600	Enhancers	Rectal Mucosa Donor 31	rectum
34	chr10:112578000-112583800	Enhancers	Fetal Brain Male	brain
35	chr10:112578200-112579400	Enhancers	Placenta Amnion	Placenta Amnion
36	chr10:112578200-112579800	Enhancers	Duodenum Smooth Muscle	Duodenum
37	chr10:112578200-112580400	Enhancers	Liver	Liver
38	chr10:112578200-112581000	Enhancers	HSMMtube	muscle
39	chr10:112578200-112582200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
40	chr10:112578200-112582600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr10:112578200-112582600	Weak transcription	Primary B cells from cord blood	blood
42	chr10:112578200-112583000	Enhancers	Ovary	ovary
43	chr10:112578200-112584800	Enhancers	Placenta	Placenta
44	chr10:112578200-112585400	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr10:112578400-112579600	Enhancers	Fetal Intestine Large	intestine
46	chr10:112578400-112583200	Enhancers	Aorta	Aorta
47	chr10:112578400-112583200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
48	chr10:112578600-112579600	Weak transcription	Brain Hippocampus Middle	brain
49	chr10:112578600-112579800	Weak transcription	Gastric	stomach
50	chr10:112578600-112580000	Weak transcription	Brain Substantia Nigra	brain

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