Variant report

Variant	nsv468617
Chromosome Location	chr1:239350728-239564682
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr1:239512029-239512060	K562	blood:	n/a	n/a
2	ATF1	chr1:239359352-239359499	K562	blood:	n/a	n/a
3	BACH1	chr1:239416446-239416729	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr1:239406269-239406657	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr1:239549812-239550171	H1-hESC	embryonic stem cell:	n/a	n/a
6	BHLHE40	chr1:239472079-239472233	GM12878	blood:	n/a	n/a
7	BHLHE40	chr1:239357358-239357366	GM12878	blood:	n/a	n/a
8	BRCA1	chr1:239411568-239411578	Hela-S3	cervix:	n/a	n/a
9	BRCA1	chr1:239382020-239382030	Hela-S3	cervix:	n/a	n/a
10	CBX3	chr1:239388769-239389015	K562	blood:	n/a	n/a
11	CBX3	chr1:239388749-239389059	K562	blood:	n/a	n/a
12	CEBPB	chr1:239549707-239549979	H1-hESC	embryonic stem cell:	n/a	n/a
13	CEBPB	chr1:239522649-239522780	A549	lung:	n/a	chr1:239522754-239522767 chr1:239522754-239522765 chr1:239522754-239522765
14	CEBPB	chr1:239478320-239478939	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr1:239456682-239457032	HepG2	liver:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
16	CEBPB	chr1:239386190-239386459	A549	lung:	n/a	n/a
17	CEBPB	chr1:239410547-239411064	Hela-S3	cervix:	n/a	chr1:239410794-239410805
18	CEBPB	chr1:239431934-239432183	A549	lung:	n/a	chr1:239432036-239432049
19	CEBPB	chr1:239384917-239385153	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr1:239478325-239478922	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr1:239513986-239514194	A549	lung:	n/a	chr1:239514022-239514035
22	CEBPB	chr1:239512338-239512591	HepG2	liver:	n/a	chr1:239512449-239512462
23	CEBPB	chr1:239433939-239434139	A549	lung:	n/a	n/a
24	CEBPB	chr1:239552222-239552477	A549	lung:	n/a	chr1:239552465-239552477 chr1:239552379-239552392
25	CEBPB	chr1:239432027-239432112	Hela-S3	cervix:	n/a	chr1:239432036-239432049
26	CEBPB	chr1:239396970-239397295	Hela-S3	cervix:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
27	CEBPB	chr1:239456695-239457031	Hela-S3	cervix:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
28	CEBPB	chr1:239410568-239411055	A549	lung:	n/a	chr1:239410794-239410805
29	CEBPB	chr1:239402783-239403130	Hela-S3	cervix:	n/a	n/a
30	CEBPB	chr1:239496705-239497062	HepG2	liver:	n/a	chr1:239496870-239496883 chr1:239496872-239496883 chr1:239496872-239496881 chr1:239496870-239496881 chr1:239496870-239496883
31	CEBPB	chr1:239396997-239397254	H1-hESC	embryonic stem cell:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
32	CEBPB	chr1:239431965-239432087	K562	blood:	n/a	chr1:239432036-239432049
33	CEBPB	chr1:239396957-239397251	A549	lung:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
34	CEBPB	chr1:239396965-239397291	MCF-7	breast:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
35	CEBPB	chr1:239410634-239410989	A549	lung:	n/a	chr1:239410794-239410805
36	CEBPB	chr1:239406191-239406586	H1-hESC	embryonic stem cell:	n/a	chr1:239406374-239406386
37	CEBPB	chr1:239396993-239397286	HepG2	liver:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
38	CEBPB	chr1:239456728-239456970	H1-hESC	embryonic stem cell:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
39	CEBPB	chr1:239552208-239552537	HepG2	liver:	n/a	chr1:239552465-239552477 chr1:239552379-239552392
40	CEBPB	chr1:239410629-239410913	A549	lung:	n/a	chr1:239410794-239410805
41	CEBPB	chr1:239471250-239471450	IMR90	lung:	n/a	chr1:239471396-239471409
42	CEBPB	chr1:239456699-239457043	A549	lung:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
43	CEBPB	chr1:239456672-239457037	IMR90	lung:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
44	CEBPB	chr1:239456640-239457027	K562	blood:	n/a	chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456862 chr1:239456851-239456864 chr1:239456853-239456864 chr1:239456853-239456862 chr1:239456853-239456862 chr1:239456851-239456862
45	CEBPB	chr1:239396929-239397357	A549	lung:	n/a	chr1:239397127-239397138 chr1:239397127-239397140 chr1:239397128-239397139
46	CHD1	chr1:239550579-239550595	H1-hESC	embryonic stem cell:	n/a	n/a
47	CHD1	chr1:239550036-239550282	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD2	chr1:239549614-239550093	H1-hESC	embryonic stem cell:	n/a	chr1:239549736-239549746
49	CTBP2	chr1:239549362-239551324	H1-hESC	embryonic stem cell:	n/a	n/a
50	CTCF	chr1:239472080-239472230	HCM	heart:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr1:239550378-239550428	H1-hESC	embryonic stem cell:	embryo
2	chr1:239550378-239550428	H1-hESC	embryonic stem cell:	embryo
3	chr1:239550578-239550628	IMR90	lung:	fetal
4	chr1:239549577-239549627	AG09319	gingival:	n/a
5	chr1:239549853-239549903	AG09319	gingival:	n/a
6	chr1:239549577-239549627	SK-N-SH_RA	brain:	n/a
7	chr1:239549853-239549903	ovcar-3	ovarian:	n/a
8	chr1:239546278-239546328	AG09309	skin:	n/a
9	chr1:239549798-239549848	Jurkat	blood:	n/a
10	chr1:239551040-239551090	AG04449	skin:	fetal
11	chr1:239550177-239550227	HCPEpiC	choroid plexus:	n/a
12	chr1:239554854-239554904	RPTEC	kidney:	n/a
13	chr1:239549600-239549650	PFSK-1	brain:	n/a
14	chr1:239551249-239551299	Jurkat	blood:	n/a
15	chr1:239550378-239550428	SK-N-SH	brain:	n/a
16	chr1:239546278-239546328	HRCEpiC	kidney:	n/a
17	chr1:239551249-239551299	NH-A	brain:	n/a
18	chr1:239550303-239550353	GM12878	blood:	n/a
19	chr1:239549626-239549676	SK-N-SH_RA	brain:	n/a
20	chr1:239552128-239552178	HAEpiC	amniotic membrane:	n/a
21	chr1:239549577-239549627	HepG2	liver:	n/a
22	chr1:239550535-239550585	Jurkat	blood:	n/a
23	chr1:239550578-239550628	CMK	blood:	n/a
24	chr1:239546278-239546328	AG09319	gingival:	n/a
25	chr1:239546278-239546328	HL-60	blood:	n/a
26	chr1:239549853-239549903	NHDF-neo	bronchial:	n/a
27	chr1:239550303-239550353	CMK	blood:	n/a
28	chr1:239551177-239551227	HL-60	blood:	n/a
29	chr1:239549600-239549650	Hela-S3	cervix:	n/a
30	chr1:239549830-239549880	NHDF-neo	bronchial:	n/a
31	chr1:239551040-239551090	HPAEpiC	pulmonary alveolar:	n/a
32	chr1:239550303-239550353	K562	blood:	n/a
33	chr1:239549626-239549676	HMEC	breast:	n/a
34	chr1:239550378-239550428	AG09309	skin:	n/a
35	chr1:239551177-239551227	SK-N-SH_RA	brain:	n/a
36	chr1:239551040-239551090	AG09309	skin:	n/a
37	chr1:239546278-239546328	HCM	heart:	n/a
38	chr1:239551249-239551299	AoSMC	blood vessel:	n/a
39	chr1:239550303-239550353	GM12891	blood:	n/a
40	chr1:239554854-239554904	LNCaP	prostate:	n/a
41	chr1:239552128-239552178	ovcar-3	ovarian:	n/a
42	chr1:239554854-239554904	ProgFib	skin:	n/a
43	chr1:239549798-239549848	HNPCEpiC	eye:	n/a
44	chr1:239546278-239546328	MCF10A-Er-Src	breast:	n/a
45	chr1:239551177-239551227	HEK293	kidney:	embryo
46	chr1:239550535-239550585	AoSMC	blood vessel:	n/a
47	chr1:239549830-239549880	HCPEpiC	choroid plexus:	n/a
48	chr1:239546278-239546328	GM12891	blood:	n/a
49	chr1:239549830-239549880	SAEC	small airway:	n/a
50	chr1:239549600-239549650	HNPCEpiC	eye:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:239525984..239528866-chr1:239536104..239539077,2	K562	blood:
2	chr1:239471698..239472457-chr1:240061178..240061916,3	MCF-7	breast:
3	chr1:239430571..239432945-chr1:239434306..239437298,4	K562	blood:
4	chr1:239430719..239432945-chr1:239435753..239437298,2	K562	blood:
5	chr1:239525984..239528866-chr1:239536104..239539077,2	K562	blood:
6	chr1:239347033..239349872-chr1:239353047..239355159,2	K562	blood:
7	chr1:239456002..239458257-chr1:239463299..239466056,2	K562	blood:
8	chr1:239363057..239365488-chr1:239366388..239369321,2	K562	blood:
9	chr1:239363057..239365488-chr1:239366388..239369321,2	K562	blood:
10	chr1:239409265..239410831-chr1:239413803..239416461,2	K562	blood:
11	chr1:239403598..239406244-chr1:239406380..239408515,2	K562	blood:
12	chr1:239403598..239406244-chr1:239406380..239408515,2	K562	blood:
13	chr1:239378815..239380653-chr1:239386749..239388785,2	K562	blood:
14	chr1:239430719..239432945-chr1:239435753..239437298,2	K562	blood:
15	chr1:239456002..239458257-chr1:239463299..239466056,2	K562	blood:
16	chr1:239430571..239432945-chr1:239434306..239437298,4	K562	blood:
17	chr1:239378815..239380653-chr1:239386749..239388785,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GREM2-7	chr1:239433025-239433440	XLOC_001274
2	lnc-CHRM3-1	chr1:239550010-239550527	NONHSAT010471
3	lnc-GREM2-7	chr1:239433025-239433445	ENSG00000227185.2
4	lnc-GREM2-7	chr1:239439753-239439761	ENSG00000227185.2
5	lnc-GREM2-8	chr1:239416530-239416637	XLOC_001273
6	lnc-CHRM3-1	chr1:239550010-239550527	NONHSAT139940
7	lnc-CHRM3-1	chr1:239550220-239550527	NONHSAT010472
8	lnc-GREM2-8	chr1:239413979-239414243	XLOC_001273
9	lnc-GREM2-8	chr1:239416533-239416635	NONHSAT010468
10	lnc-GREM2-8	chr1:239418057-239418481	NONHSAT010468
11	lnc-GREM2-8	chr1:239411108-239414118	ENSG00000259776.1
12	lnc-GREM2-8	chr1:239411107-239414118	NONHSAT010466
13	lnc-CHRM3-1	chr1:239549865-239550527	NONHSAT010470
14	lnc-GREM2-7	chr1:239461206-239461237	XLOC_001274

Variant related genes	Relation type
ENSG00000227185	TF binding region
CHRM3	TF binding region
ENSG00000259776	TF binding region
ENSG00000227185	CpG island
CHRM3	CpG island
ENSG00000259776	CpG island
ENSG00000259776	chromatin interactions
CDC42EP1	miRNA target sites
DNAJA3	miRNA target sites
COX10	miRNA target sites
ATMIN	miRNA target sites

Extended variants
information (count: 5535 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:5535 , 50 per page) page: 1 2 3 4 5 6 7 ... 111

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2664057	chr1:239350728-239350729	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs558198619	chr1:239350743-239350744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs16837972	chr1:239350770-239350771	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs2354182	chr1:239367008-239367009	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs556382529	chr1:239367018-239367019	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs576484575	chr1:239367032-239367033	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs2820007	chr1:239367053-239367054	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs554794436	chr1:239367054-239367055	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs144225945	chr1:239367141-239367142	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs112646000	chr1:239367145-239367146	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs540118974	chr1:239367227-239367228	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs368080678	chr1:239367285-239367286	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs58464014	chr1:239367306-239367307	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs146082836	chr1:239367329-239367330	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs117532902	chr1:239367338-239367339	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs563185591	chr1:239367383-239367384	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs530275062	chr1:239367434-239367435	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs570211687	chr1:239367467-239367468	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs527984349	chr1:239367477-239367478	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs542385988	chr1:239367497-239367498	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs537283551	chr1:239367512-239367513	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs527409505	chr1:239367516-239367517	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs376563742	chr1:239367522-239367523	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs140084665	chr1:239367531-239367532	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs112322501	chr1:239367597-239367598	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs191402332	chr1:239367629-239367630	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs549854541	chr1:239367638-239367639	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs116953274	chr1:239367647-239367648	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs535323873	chr1:239367701-239367702	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs185060157	chr1:239367789-239367790	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs564773056	chr1:239367868-239367869	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs189382911	chr1:239367915-239367916	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs149813525	chr1:239367917-239367918	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs181834428	chr1:239367957-239367958	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs185351821	chr1:239368004-239368005	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs574133957	chr1:239368020-239368021	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs189832976	chr1:239368032-239368033	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs145813824	chr1:239368045-239368046	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs148993162	chr1:239368065-239368066	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs542132452	chr1:239368101-239368102	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs181588773	chr1:239368110-239368111	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs541544929	chr1:239368136-239368137	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs111430144	chr1:239368162-239368163	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs577994687	chr1:239368223-239368224	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs376423399	chr1:239368251-239368252	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs563835858	chr1:239368252-239368253	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs147753909	chr1:239368282-239368283	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs115224148	chr1:239368304-239368305	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs561491157	chr1:239368336-239368337	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs564257310	chr1:239368405-239368406	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
HIV/AIDS	22032296	CNVD
Schizophrenia	19415332	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Rett syndrome	21593744	CNVD
Medulloblastoma	21979893	CNVD
Cancer	20164919	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17133270	CNVD
Non-small cell lung cancer	21044232	CNVD
Cervical cancer	21063398	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	20632083	CNVD
Endometrial cancer	22040021	CNVD
Ewing''s sarcoma	21437220	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Medulloblastoma	21292688	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	21264507	CNVD
Liposarcoma	21253554	CNVD
Multiple myeloma	21628407	CNVD
Cancer	16751803	CNVD
Prostate cancer	16705090	CNVD
Neuroblastoma	19435921	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16461572	CNVD
Intracranial tumor	16823260	CNVD
Medulloblastoma	18056178	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	17603634	CNVD
Neuroblastoma	21899760	CNVD
Breast cancer	21858162	CNVD
Non-small cell lung cancer	21385341	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	16608533	CNVD
Ewing''s sarcoma	22429812	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17001317	CNVD
Acute myeloid leukemia	21251322	CNVD
Multiple myeloma	17550852	CNVD
Prostate cancer	18632612	CNVD
Acute myeloid leukemia	20729466	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Testicular germ cell tumor	18059402	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	19100363	CNVD
Breast cancer	21509527	CNVD
Urothelial carcinoma	21177765	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Chordoma	18071362	CNVD
T-cell lymphomas	19863542	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hepatocellular carcinoma	18803288	CNVD
Urothelial tumor	18831757	CNVD
Lung cancer	18438408	CNVD
Medulloblastoma	16783165	CNVD
Basal cell lymphoma	17170743	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Congenital abnormalities	21549014	CNVD
Developmental delay	21549014	CNVD
Mental retardation	21549014	CNVD
small cell lung cancer	20016488	CNVD
Cancer	20164920	CNVD
Cancer	17060936	CNVD
abnormal development	18461090	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Myelofibrosis	22110671	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Hepatocellular carcinoma	16750200	CNVD
Arrhythmogenic right ventricular cardiomyopathy	17576883	CNVD
Multiple myeloma	16616336	CNVD
Developmental delay	21147756	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioma	20126413	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:770 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:239345800-239350800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr1:239347200-239350800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr1:239367000-239369800	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr1:239369400-239370600	Enhancers	Fetal Intestine Large	intestine
5	chr1:239369600-239370000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
6	chr1:239370600-239376000	Weak transcription	Fetal Intestine Large	intestine
7	chr1:239372200-239372400	Enhancers	Fetal Brain Male	brain
8	chr1:239372400-239373200	Weak transcription	Fetal Brain Male	brain
9	chr1:239373200-239374400	Enhancers	Fetal Brain Male	brain
10	chr1:239374200-239374600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr1:239374200-239376000	Enhancers	Fetal Heart	heart
12	chr1:239375600-239376000	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr1:239376000-239376200	Flanking Active TSS	Fetal Heart	heart
14	chr1:239376000-239376600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
15	chr1:239376000-239376600	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr1:239376000-239376600	Active TSS	Rectal Mucosa Donor 29	rectum
17	chr1:239376000-239376800	Active TSS	Brain Angular Gyrus	brain
18	chr1:239376000-239376800	Active TSS	Brain Anterior Caudate	brain
19	chr1:239376000-239376800	Active TSS	Brain Cingulate Gyrus	brain
20	chr1:239376000-239376800	Active TSS	Brain Hippocampus Middle	brain
21	chr1:239376000-239376800	Active TSS	Brain Inferior Temporal Lobe	brain
22	chr1:239376000-239376800	Enhancers	Duodenum Mucosa	Duodenum
23	chr1:239376000-239376800	Enhancers	Fetal Intestine Small	intestine
24	chr1:239376000-239377600	Enhancers	Fetal Intestine Large	intestine
25	chr1:239376200-239376400	Enhancers	Fetal Heart	heart
26	chr1:239376200-239376600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr1:239376200-239376600	Active TSS	Brain Substantia Nigra	brain
28	chr1:239376200-239376600	Enhancers	Fetal Lung	lung
29	chr1:239376400-239376600	Flanking Active TSS	Fetal Heart	heart
30	chr1:239376600-239376800	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
31	chr1:239376600-239377200	Enhancers	Fetal Heart	heart
32	chr1:239376800-239377800	Weak transcription	Fetal Intestine Small	intestine
33	chr1:239377600-239378400	Weak transcription	Fetal Intestine Large	intestine
34	chr1:239377800-239378000	Enhancers	Fetal Intestine Small	intestine
35	chr1:239378400-239378800	Enhancers	Fetal Intestine Large	intestine
36	chr1:239381200-239382200	Enhancers	Colon Smooth Muscle	Colon
37	chr1:239381400-239381800	Enhancers	Primary neutrophils fromperipheralblood	blood
38	chr1:239386400-239387000	Enhancers	Colon Smooth Muscle	Colon
39	chr1:239392000-239392600	Enhancers	A549	lung
40	chr1:239392000-239392600	Enhancers	Hela-S3	cervix
41	chr1:239392600-239393800	Weak transcription	A549	lung
42	chr1:239392600-239393800	Weak transcription	Hela-S3	cervix
43	chr1:239393800-239394400	Active TSS	A549	lung
44	chr1:239394600-239395000	Enhancers	ES-I3 Cell Line	embryonic stem cell
45	chr1:239394600-239395000	Enhancers	H9 Cell Line	embryonic stem cell
46	chr1:239394600-239395000	Enhancers	Sigmoid Colon	Sigmoid Colon
47	chr1:239394800-239395000	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr1:239394800-239395000	Enhancers	iPS-18 Cell Line	embryonic stem cell
49	chr1:239394800-239395000	Enhancers	iPS-20b Cell Line	embryonic stem cell
50	chr1:239394800-239396200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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