Variant report

Variant	nsv469163
Chromosome Location	chr12:21579080-21592357
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:691)
CpG islands
(count:732)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:691 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:21590352-21590854	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:21590315-21590851	K562	blood:	n/a	n/a
3	ARID3A	chr12:21591320-21592412	K562	blood:	n/a	chr12:21591949-21591965
4	ATF1	chr12:21590441-21591147	K562	blood:	n/a	n/a
5	ATF2	chr12:21590395-21591057	H1-hESC	embryonic stem cell:	n/a	n/a
6	ATF2	chr12:21590198-21590948	GM12878	blood:	n/a	n/a
7	ATF3	chr12:21590978-21591295	K562	blood:	n/a	n/a
8	BCLAF1	chr12:21590329-21591010	GM12878	blood:	n/a	chr12:21590623-21590632 chr12:21590569-21590578
9	BCLAF1	chr12:21590353-21590822	GM12878	blood:	n/a	chr12:21590623-21590632 chr12:21590569-21590578
10	BHLHE40	chr12:21589970-21591037	GM12878	blood:	n/a	n/a
11	BHLHE40	chr12:21590418-21591019	K562	blood:	n/a	n/a
12	BRCA1	chr12:21590077-21590851	H1-hESC	embryonic stem cell:	n/a	n/a
13	BRCA1	chr12:21590093-21591324	Hela-S3	cervix:	n/a	n/a
14	BRCA1	chr12:21590486-21591011	HepG2	liver:	n/a	n/a
15	CBX3	chr12:21590318-21590916	K562	blood:	n/a	n/a
16	CCNT2	chr12:21590491-21590864	K562	blood:	n/a	chr12:21590781-21590790
17	CEBPB	chr12:21590548-21591373	HepG2	liver:	n/a	n/a
18	CEBPB	chr12:21590996-21591375	IMR90	lung:	n/a	n/a
19	CEBPB	chr12:21591075-21591315	HepG2	liver:	n/a	n/a
20	CEBPB	chr12:21590851-21591379	K562	blood:	n/a	n/a
21	CEBPB	chr12:21590368-21590568	K562	blood:	n/a	n/a
22	CEBPB	chr12:21590431-21591337	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr12:21590971-21591354	MCF-7	breast:	n/a	n/a
24	CEBPB	chr12:21591005-21591380	A549	lung:	n/a	n/a
25	CEBPB	chr12:21590028-21591402	Hela-S3	cervix:	n/a	n/a
26	CEBPB	chr12:21591052-21591351	K562	blood:	n/a	n/a
27	CEBPB	chr12:21590452-21591385	HepG2	liver:	n/a	n/a
28	CEBPB	chr12:21591010-21591267	ECC-1	luminal epithelium:	n/a	n/a
29	CEBPD	chr12:21590644-21591000	HepG2	liver:	n/a	n/a
30	CEBPD	chr12:21590376-21590627	HepG2	liver:	n/a	n/a
31	CHD1	chr12:21590767-21591156	H1-hESC	embryonic stem cell:	n/a	n/a
32	CHD1	chr12:21590217-21591081	GM12878	blood:	n/a	n/a
33	CHD2	chr12:21590342-21591383	K562	blood:	n/a	n/a
34	CHD2	chr12:21590388-21590913	HepG2	liver:	n/a	n/a
35	CHD2	chr12:21590330-21591336	Hela-S3	cervix:	n/a	n/a
36	CHD2	chr12:21589990-21591047	GM12878	blood:	n/a	n/a
37	CHD2	chr12:21590385-21590931	H1-hESC	embryonic stem cell:	n/a	n/a
38	CREB1	chr12:21590284-21591040	GM12878	blood:	n/a	n/a
39	CREB1	chr12:21590389-21590917	H1-hESC	embryonic stem cell:	n/a	n/a
40	CREB1	chr12:21590424-21590988	H1-hESC	embryonic stem cell:	n/a	n/a
41	CREB1	chr12:21590399-21591010	A549	lung:	n/a	n/a
42	CTCF	chr12:21590490-21590809	T-47D	breast:	n/a	n/a
43	CTCF	chr12:21590442-21590871	H1-hESC	embryonic stem cell:	n/a	n/a
44	CTCF	chr12:21590560-21590710	GM12873	blood:	n/a	n/a
45	CTCF	chr12:21590600-21590750	K562	blood:	n/a	n/a
46	CTCF	chr12:21590620-21590770	GM12875	blood:	n/a	n/a
47	CTCF	chr12:21590640-21590790	AG10803	skin:	n/a	n/a
48	CTCF	chr12:21590660-21590810	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr12:21590478-21590805	K562	blood:	n/a	n/a
50	CTCF	chr12:21590560-21590710	HUVEC	blood vessel:	n/a	n/a

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:21590784-21590834	HL-60	blood:	n/a
2	chr12:21590246-21590296	SK-N-MC	brain:	n/a
3	chr12:21587445-21587495	HNPCEpiC	eye:	n/a
4	chr12:21590470-21590520	GM06990	blood:	n/a
5	chr12:21590470-21590520	GM12892	blood:	n/a
6	chr12:21590632-21590682	Hela-S3	cervix:	n/a
7	chr12:21590544-21590594	NHDF-neo	bronchial:	n/a
8	chr12:21590942-21590992	HCT-116	colon:	n/a
9	chr12:21590784-21590834	Hepatocyte	liver:	n/a
10	chr12:21590632-21590682	MCF-7	breast:	n/a
11	chr12:21590544-21590594	HEK293	kidney:	embryo
12	chr12:21587445-21587495	NT2-D1	testis:	n/a
13	chr12:21590536-21590586	HEK293	kidney:	embryo
14	chr12:21590544-21590594	GM12891	blood:	n/a
15	chr12:21590536-21590586	NB4	blood:	n/a
16	chr12:21587445-21587495	SAEC	small airway:	n/a
17	chr12:21590536-21590586	HEEpiC	esophagus:	n/a
18	chr12:21590451-21590501	NHBE	bronchial:	n/a
19	chr12:21590784-21590834	HCM	heart:	n/a
20	chr12:21590536-21590586	CMK	blood:	n/a
21	chr12:21590784-21590834	GM06990	blood:	n/a
22	chr12:21590470-21590520	HAEpiC	amniotic membrane:	n/a
23	chr12:21590942-21590992	HUVEC	blood vessel:	n/a
24	chr12:21590451-21590501	GM19239	blood:	n/a
25	chr12:21590632-21590682	AG10803	skin:	n/a
26	chr12:21590544-21590594	NT2-D1	testis:	n/a
27	chr12:21590451-21590501	CMK	blood:	n/a
28	chr12:21590942-21590992	PrEC	prostate:	n/a
29	chr12:21587445-21587495	PrEC	prostate:	n/a
30	chr12:21590784-21590834	NHBE	bronchial:	n/a
31	chr12:21589206-21589256	GM12878	blood:	n/a
32	chr12:21590470-21590520	Hepatocyte	liver:	n/a
33	chr12:21587445-21587495	GM12891	blood:	n/a
34	chr12:21590632-21590682	IMR90	lung:	fetal
35	chr12:21590942-21590992	Hepatocyte	liver:	n/a
36	chr12:21590246-21590296	HAEpiC	amniotic membrane:	n/a
37	chr12:21590544-21590594	AG04450	lung:	fetal
38	chr12:21590451-21590501	A549	lung:	n/a
39	chr12:21590470-21590520	AG09309	skin:	n/a
40	chr12:21589206-21589256	GM06990	blood:	n/a
41	chr12:21589206-21589256	HRPEpiC	eye:	n/a
42	chr12:21590536-21590586	AG04450	lung:	fetal
43	chr12:21590942-21590992	AoSMC	blood vessel:	n/a
44	chr12:21590632-21590682	AG09319	gingival:	n/a
45	chr12:21589206-21589256	HIPEpiC	eye:	n/a
46	chr12:21590632-21590682	MCF10A-Er-Src	breast:	n/a
47	chr12:21590942-21590992	IMR90	lung:	fetal
48	chr12:21589206-21589256	BJ	skin:	n/a
49	chr12:21590305-21590355	AG09319	gingival:	n/a
50	chr12:21590470-21590520	AG10803	skin:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:21591250..21594769-chr12:21604296..21607496,3	K562	blood:
2	chr11:30344192..30345102-chr12:21590448..21591163,2	Hela-S3	cervix:
3	chr12:21590034..21590802-chr19:47760711..47761229,2	Hela-S3	cervix:
4	chr11:85780118..85780978-chr12:21590354..21590877,2	Hela-S3	cervix:
5	chr12:21584042..21585890-chr12:21589405..21591769,2	MCF-7	breast:
6	chr12:21569338..21572113-chr12:21589171..21592483,4	K562	blood:
7	chr12:21569338..21572113-chr12:21589171..21592854,4	K562	blood:
8	chr11:117102270..117102865-chr12:21590776..21591304,2	HCT-116	colon:
9	chr12:21590441..21591053-chr3:42054547..42055346,2	NB4	blood:
10	chr11:106698243..106699219-chr12:21590223..21591148,2	HCT-116	colon:
11	chr12:21589456..21592020-chr12:21808889..21812230,4	K562	blood:
12	chr12:21578534..21580531-chr12:21589180..21591050,2	K562	blood:
13	chr12:21570524..21573513-chr12:21578970..21581790,2	K562	blood:
14	chr12:21581278..21584655-chr12:21586014..21590785,5	K562	blood:
15	chr12:21578861..21581322-chr12:21589967..21591700,2	MCF-7	breast:
16	chr12:21590241..21590802-chr3:49058409..49058917,2	NB4	blood:
17	chr12:21590977..21592503-chr12:21654111..21656929,2	K562	blood:

No data

Variant related genes	Relation type
PYROXD1	TF binding region
PYROXD1	CpG island
ENSG00000105321	chromatin interactions
ENSG00000084453	chromatin interactions
ENSG00000111711	chromatin interactions
ENSG00000152219	chromatin interactions
ENSG00000073921	chromatin interactions
ENSG00000178149	chromatin interactions
ENSG00000111716	chromatin interactions
ENSG00000004700	chromatin interactions
ENSG00000178057	chromatin interactions
ENSG00000213252	chromatin interactions
ENSG00000182606	chromatin interactions
ENSG00000121350	chromatin interactions
ENSG00000160613	chromatin interactions

Extended variants
information (count: 493 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:493 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7314170	chr12:21579080-21579081	Inactive region	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs74064927	chr12:21579129-21579130	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs369033729	chr12:21579159-21579160	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs190389334	chr12:21579180-21579181	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs372895406	chr12:21579189-21579190	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs147701337	chr12:21579197-21579198	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs181705322	chr12:21579216-21579217	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs142527029	chr12:21579219-21579220	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs12424282	chr12:21579220-21579221	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs563475072	chr12:21579247-21579248	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs540912636	chr12:21579268-21579269	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs554221043	chr12:21579283-21579284	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs547167345	chr12:21579292-21579293	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs189519006	chr12:21579318-21579319	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs181081818	chr12:21579329-21579330	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs79399062	chr12:21579331-21579332	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs185170520	chr12:21579333-21579334	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs576289944	chr12:21579343-21579344	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs146861681	chr12:21579356-21579357	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs147943608	chr12:21579360-21579361	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs574822839	chr12:21579392-21579393	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs540761024	chr12:21579414-21579415	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs189537509	chr12:21579442-21579443	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs577557094	chr12:21579452-21579453	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs181906331	chr12:21579475-21579476	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs558577218	chr12:21579515-21579516	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs563010027	chr12:21579598-21579599	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs532045278	chr12:21579625-21579626	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs75552469	chr12:21579641-21579642	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs562259630	chr12:21579651-21579652	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs187153432	chr12:21579767-21579768	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs57358745	chr12:21579769-21579770	Inactive region	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs192077357	chr12:21579770-21579771	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs570222566	chr12:21579799-21579800	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs2110164	chr12:21579842-21579843	Inactive region	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
36	rs114945493	chr12:21579867-21579868	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs183362050	chr12:21579868-21579869	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs140608002	chr12:21579913-21579914	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs150288010	chr12:21579925-21579926	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs574825736	chr12:21579928-21579929	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs534279738	chr12:21579949-21579950	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs374509592	chr12:21579952-21579953	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs554270802	chr12:21579962-21579963	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs137926851	chr12:21579991-21579992	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs546382625	chr12:21580055-21580056	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs563128669	chr12:21580067-21580068	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs80132377	chr12:21580081-21580082	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs188523813	chr12:21580123-21580124	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs561516840	chr12:21580124-21580125	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs11046038	chr12:21580143-21580144	Inactive region	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Malignant germ cell tumour	17285132	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Myxofibrosarcoma	16751306	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Acute myeloid leukemia	16864856	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Ependymoma	18628472	CNVD
Leukemia	18628472	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	16397240	CNVD
Neurodevelopmental disorder	22521361	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
Intracranial aneurysm	16715129	CNVD
Breast cancer	21509527	CNVD
Autism	22102821	CNVD
Follicular lymphoma	18703704	CNVD
Lung cancer	18438408	CNVD
Melanoma	17363583	CNVD
Lung cancer	21911935	CNVD
Breast cancer	22048815	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Heart disease	21282601	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	17925434	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Gastric cancer	24379144	CNVD
Gastric cancer	19545448	CNVD
Lung cancer	20031968	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung adenocarcinoma	19826477	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19826477	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	17504988	CNVD
Bipolar disorder	19114987	CNVD
Lung cancer	19671679	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:424 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:21580400-21581800	Enhancers	HUVEC	blood vessel
2	chr12:21580400-21581800	Enhancers	NHDF-Ad	bronchial
3	chr12:21580400-21582000	Enhancers	Muscle Satellite Cultured Cells	--
4	chr12:21580600-21581200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr12:21580600-21581400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr12:21580600-21581800	Enhancers	NH-A	brain
7	chr12:21580600-21581800	Enhancers	Osteobl	bone
8	chr12:21581000-21581800	Enhancers	HSMM	muscle
9	chr12:21581200-21581800	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr12:21581800-21582000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr12:21581800-21590000	Weak transcription	HUVEC	blood vessel
12	chr12:21582800-21583200	Enhancers	Brain Substantia Nigra	brain
13	chr12:21583000-21583200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr12:21586800-21587200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr12:21587200-21590200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr12:21588000-21589600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
17	chr12:21589200-21589400	Bivalent Enhancer	NHDF-Ad	bronchial
18	chr12:21589200-21589800	Enhancers	K562	blood
19	chr12:21589400-21589800	Enhancers	Hela-S3	cervix
20	chr12:21589400-21590000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr12:21589400-21590200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
22	chr12:21589600-21589800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr12:21589800-21590000	Enhancers	iPS-15b Cell Line	embryonic stem cell
24	chr12:21589800-21590000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
25	chr12:21589800-21590000	Enhancers	Primary T helper cells PMA-I stimulated	--
26	chr12:21589800-21590000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
27	chr12:21589800-21590000	Enhancers	Primary T helper cells fromperipheralblood	blood
28	chr12:21589800-21590000	Enhancers	Primary T killer memory cells from peripheral blood	blood
29	chr12:21589800-21590000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
30	chr12:21589800-21590000	Enhancers	Muscle Satellite Cultured Cells	--
31	chr12:21589800-21590000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
32	chr12:21589800-21590000	Active TSS	Brain Cingulate Gyrus	brain
33	chr12:21589800-21590000	Enhancers	Brain Inferior Temporal Lobe	brain
34	chr12:21589800-21590000	Active TSS	Duodenum Mucosa	Duodenum
35	chr12:21589800-21590000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
36	chr12:21589800-21590000	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
37	chr12:21589800-21590000	Enhancers	Rectal Smooth Muscle	rectum
38	chr12:21589800-21590000	Enhancers	A549	lung
39	chr12:21589800-21590000	Enhancers	Dnd41	blood
40	chr12:21589800-21590200	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr12:21589800-21590200	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
42	chr12:21589800-21590200	Flanking Active TSS	Hela-S3	cervix
43	chr12:21589800-21590200	Flanking Active TSS	HMEC	breast
44	chr12:21589800-21590200	Flanking Active TSS	K562	blood
45	chr12:21589800-21590200	Flanking Active TSS	Osteobl	bone
46	chr12:21589800-21590400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr12:21589800-21591400	Active TSS	Fetal Kidney	kidney
48	chr12:21589800-21591600	Active TSS	HUES48 Cell Line	embryonic stem cell
49	chr12:21589800-21591600	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr12:21589800-21591600	Active TSS	Breast Myoepithelial Primary Cells	Breast

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links