Variant report

Variant	nsv469511
Chromosome Location	chr4:9609987-9754029
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1218)
CpG islands
(count:733)
Chromatin interactive
region (count:6)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1218 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:9705188-9705304	HepG2	liver:	n/a	n/a
2	ATF1	chr4:9693437-9693703	K562	blood:	n/a	n/a
3	BACH1	chr4:9689846-9689882	H1-hESC	embryonic stem cell:	n/a	n/a
4	BATF	chr4:9697635-9697868	GM12878	blood:	n/a	n/a
5	BATF	chr4:9661312-9661676	GM12878	blood:	n/a	n/a
6	BATF	chr4:9661377-9661663	GM12878	blood:	n/a	n/a
7	BATF	chr4:9715614-9715953	GM12878	blood:	n/a	n/a
8	BATF	chr4:9609924-9610228	GM12878	blood:	n/a	n/a
9	BATF	chr4:9709608-9710002	GM12878	blood:	n/a	n/a
10	BATF	chr4:9609959-9610276	GM12878	blood:	n/a	n/a
11	BATF	chr4:9637521-9637725	GM12878	blood:	n/a	n/a
12	BATF	chr4:9709684-9709950	GM12878	blood:	n/a	n/a
13	BCL11A	chr4:9693955-9694191	GM12878	blood:	n/a	n/a
14	BCL11A	chr4:9637557-9637806	GM12878	blood:	n/a	n/a
15	BCL11A	chr4:9709736-9710003	GM12878	blood:	n/a	n/a
16	BCL11A	chr4:9709714-9709970	GM12878	blood:	n/a	n/a
17	BCL11A	chr4:9661303-9661712	GM12878	blood:	n/a	n/a
18	BCL11A	chr4:9609991-9610319	GM12878	blood:	n/a	n/a
19	BCL11A	chr4:9609970-9610277	GM12878	blood:	n/a	n/a
20	BCL3	chr4:9747374-9747670	GM12878	blood:	n/a	n/a
21	BCL3	chr4:9747263-9747923	GM12878	blood:	n/a	n/a
22	BHLHE40	chr4:9697620-9697865	HepG2	liver:	n/a	n/a
23	BHLHE40	chr4:9661297-9661608	HepG2	liver:	n/a	n/a
24	BHLHE40	chr4:9733756-9733953	K562	blood:	n/a	n/a
25	BHLHE40	chr4:9705121-9705321	K562	blood:	n/a	n/a
26	BHLHE40	chr4:9693347-9693648	GM12878	blood:	n/a	n/a
27	BHLHE40	chr4:9705080-9705313	GM12878	blood:	n/a	n/a
28	BHLHE40	chr4:9693184-9693740	K562	blood:	n/a	n/a
29	BHLHE40	chr4:9693135-9693538	HepG2	liver:	n/a	chr4:9693155-9693171
30	CBX3	chr4:9709655-9709945	K562	blood:	n/a	n/a
31	CCNT2	chr4:9693190-9693570	K562	blood:	n/a	n/a
32	CEBPB	chr4:9727679-9727879	HepG2	liver:	n/a	chr4:9727792-9727803 chr4:9727792-9727805
33	CEBPB	chr4:9629876-9630149	HepG2	liver:	n/a	chr4:9630037-9630048
34	CEBPB	chr4:9639784-9639891	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr4:9720182-9720485	K562	blood:	n/a	chr4:9720327-9720338
36	CEBPB	chr4:9720234-9720515	HepG2	liver:	n/a	chr4:9720327-9720338
37	CEBPB	chr4:9725682-9725793	HepG2	liver:	n/a	n/a
38	CEBPB	chr4:9637488-9637693	HepG2	liver:	n/a	chr4:9637617-9637628
39	CEBPB	chr4:9661262-9661447	K562	blood:	n/a	n/a
40	CEBPD	chr4:9712816-9713034	K562	blood:	n/a	n/a
41	CHD1	chr4:9613391-9613550	GM12878	blood:	n/a	n/a
42	CHD2	chr4:9705111-9705206	GM12878	blood:	n/a	n/a
43	CTCF	chr4:9705160-9705310	GM12873	blood:	n/a	chr4:9705268-9705284 chr4:9705269-9705290 chr4:9705270-9705283 chr4:9705234-9705244 chr4:9705267-9705285
44	CTCF	chr4:9697760-9697910	GM12874	blood:	n/a	chr4:9697761-9697779 chr4:9697763-9697784
45	CTCF	chr4:9705049-9705416	ECC-1	luminal epithelium:	n/a	chr4:9705268-9705284 chr4:9705269-9705290 chr4:9705270-9705283 chr4:9705234-9705244 chr4:9705267-9705285
46	CTCF	chr4:9682992-9683054	Kidney_OC	kidney:	n/a	n/a
47	CTCF	chr4:9692691-9692704	GM10248	blood:	n/a	n/a
48	CTCF	chr4:9661480-9661630	SK-N-SH_RA	brain:	n/a	n/a
49	CTCF	chr4:9701601-9701637	Spleen_OC	spleen:	n/a	n/a
50	CTCF	chr4:9661400-9661675	GM10248	blood:	n/a	n/a

(count:733 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:9693312-9693362	T-47D	breast:	n/a
2	chr4:9693312-9693362	T-47D	breast:	n/a
3	chr4:9653008-9653058	NH-A	brain:	n/a
4	chr4:9661422-9661472	H1-hESC	embryonic stem cell:	embryo
5	chr4:9693764-9693814	IMR90	lung:	fetal
6	chr4:9653008-9653058	SK-N-MC	brain:	n/a
7	chr4:9692836-9692886	SKMC	muscle:	n/a
8	chr4:9707741-9707791	HCT-116	colon:	n/a
9	chr4:9693329-9693379	ProgFib	skin:	n/a
10	chr4:9707741-9707791	RPTEC	kidney:	n/a
11	chr4:9661422-9661472	HRPEpiC	eye:	n/a
12	chr4:9693764-9693814	Hepatocyte	liver:	n/a
13	chr4:9707741-9707791	Caco-2	colon:	n/a
14	chr4:9661405-9661455	H1-hESC	embryonic stem cell:	embryo
15	chr4:9696916-9696966	GM12892	blood:	n/a
16	chr4:9693516-9693566	GM12891	blood:	n/a
17	chr4:9692836-9692886	ECC-1	luminal epithelium:	n/a
18	chr4:9693312-9693362	AG09319	gingival:	n/a
19	chr4:9693764-9693814	BE2_C	brain:	n/a
20	chr4:9709042-9709092	HEK293	kidney:	embryo
21	chr4:9693516-9693566	MCF10A-Er-Src	breast:	n/a
22	chr4:9661422-9661472	HCF	heart:	n/a
23	chr4:9661405-9661455	HepG2	liver:	n/a
24	chr4:9661405-9661455	BJ	skin:	n/a
25	chr4:9693329-9693379	MCF10A-Er-Src	breast:	n/a
26	chr4:9653008-9653058	GM12878	blood:	n/a
27	chr4:9707741-9707791	Hela-S3	cervix:	n/a
28	chr4:9689364-9689414	CMK	blood:	n/a
29	chr4:9689364-9689414	HEEpiC	esophagus:	n/a
30	chr4:9709042-9709092	SK-N-MC	brain:	n/a
31	chr4:9653008-9653058	SKMC	muscle:	n/a
32	chr4:9653008-9653058	Hepatocyte	liver:	n/a
33	chr4:9689364-9689414	AG04449	skin:	fetal
34	chr4:9709042-9709092	IMR90	lung:	fetal
35	chr4:9692836-9692886	GM19239	blood:	n/a
36	chr4:9693516-9693566	SAEC	small airway:	n/a
37	chr4:9693329-9693379	SK-N-SH_RA	brain:	n/a
38	chr4:9693329-9693379	T-47D	breast:	n/a
39	chr4:9661422-9661472	HUVEC	blood vessel:	n/a
40	chr4:9707741-9707791	HRCEpiC	kidney:	n/a
41	chr4:9653008-9653058	GM19239	blood:	n/a
42	chr4:9693516-9693566	ovcar-3	ovarian:	n/a
43	chr4:9661422-9661472	AG09319	gingival:	n/a
44	chr4:9693312-9693362	HEEpiC	esophagus:	n/a
45	chr4:9707741-9707791	ECC-1	luminal epithelium:	n/a
46	chr4:9693312-9693362	NB4	blood:	n/a
47	chr4:9692836-9692886	MCF-7	breast:	n/a
48	chr4:9692836-9692886	IMR90	lung:	fetal
49	chr4:9693516-9693566	HNPCEpiC	eye:	n/a
50	chr4:9693329-9693379	HEEpiC	esophagus:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr4:9704779..9705714-chr4:10015117..10016069,5	MCF-7	breast:
2	chr4:9699934..9701585-chr4:10019007..10021805,2	K562	blood:
3	chr4:9705013..9706114-chr4:10020117..10020881,3	MCF-7	breast:
4	chr4:9704873..9705750-chr4:10016280..10017221,3	K562	blood:
5	chr4:9705037..9705657-chr4:9778184..9778690,2	K562	blood:
6	chr4:9533415..9534346-chr4:9660887..9661684,2	MCF-7	breast:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SLC2A9-2	chr4:9682416-9682671	XLOC_003880
2	lnc-DRD5-16	chr4:9678932-9679558	NONHSAT095141
3	lnc-DRD5-15	chr4:9681973-9682135	l_2602_chr4:9680111-9682135_thyroid
4	lnc-SLC2A9-2	chr4:9693361-9693365	XLOC_003880
5	lnc-SLC2A9-1	chr4:9686325-9686330	XLOC_003881
6	lnc-SLC2A9-1	chr4:9691882-9692319	XLOC_003881
7	lnc-SLC2A9-6	chr4:9681968-9682164	l_2603_chr4:9680179-9682164_kidney
8	lnc-SLC2A9-6	chr4:9680180-9680546	l_2603_chr4:9680179-9682164_kidney
9	lnc-DRD5-15	chr4:9680112-9680551	l_2602_chr4:9680111-9682135_thyroid

No data

Variant related genes	Relation type
FAM86MP	TF binding region
ENSG00000249563	TF binding region
ALG1L3P	TF binding region
ENPP7P11	TF binding region
OR7E35P	TF binding region
FAM86MP	CpG island
ENSG00000249563	CpG island
ALG1L3P	CpG island
ENPP7P11	CpG island
OR7E35P	CpG island
ENSG00000109667	chromatin interactions
FBXW7	miRNA target sites

Extended variants
information (count: 9130 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:9130 , 50 per page) page: 1 2 3 4 5 6 7 ... 183

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs191191672	chr4:9610003-9610004	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs73802919	chr4:9610004-9610005	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs182517471	chr4:9610014-9610015	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs547627613	chr4:9610015-9610016	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs544465084	chr4:9610068-9610069	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs559630041	chr4:9610074-9610075	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs530291981	chr4:9610080-9610081	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs386671512	chr4:9610084-9610085	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs734628	chr4:9610085-9610086	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs536632373	chr4:9610102-9610103	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs552297633	chr4:9610112-9610113	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs111460768	chr4:9610128-9610129	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs534829439	chr4:9610139-9610140	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs552861848	chr4:9610142-9610143	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs538458607	chr4:9610158-9610159	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs574806473	chr4:9610159-9610160	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs535777667	chr4:9610167-9610168	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs186529028	chr4:9610184-9610185	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs576547964	chr4:9610185-9610186	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs144548176	chr4:9610186-9610187	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs553973552	chr4:9610202-9610203	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs543447958	chr4:9610205-9610206	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs565381169	chr4:9610212-9610213	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs147850083	chr4:9610219-9610220	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs541627945	chr4:9610231-9610232	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs116575004	chr4:9610243-9610244	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs190891681	chr4:9610244-9610245	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs545984332	chr4:9610267-9610268	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs564574775	chr4:9610274-9610275	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs183064078	chr4:9610284-9610285	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs530532041	chr4:9610293-9610294	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs374408495	chr4:9610301-9610302	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs572131755	chr4:9610318-9610319	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs187365757	chr4:9610322-9610323	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs192896517	chr4:9610332-9610333	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs546697233	chr4:9610335-9610336	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs568296558	chr4:9610342-9610343	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs535637698	chr4:9610345-9610346	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs557338746	chr4:9610360-9610361	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs569125243	chr4:9610368-9610369	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs141379091	chr4:9610370-9610371	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs528482236	chr4:9610416-9610417	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs183420477	chr4:9610421-9610422	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs577286852	chr4:9610424-9610425	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs541192021	chr4:9610430-9610431	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs146986909	chr4:9610461-9610462	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs574731152	chr4:9610470-9610471	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs187908992	chr4:9610478-9610479	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs368421323	chr4:9610495-9610496	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs114093139	chr4:9610516-9610517	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Urothelial carcinoma	21177765	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:553 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:9606000-9610200	Weak transcription	Fetal Stomach	stomach
2	chr4:9606000-9619400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr4:9606200-9610000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr4:9606600-9615000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr4:9606800-9612800	Enhancers	Fetal Thymus	thymus
6	chr4:9607400-9610000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr4:9607600-9610000	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr4:9607600-9610000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
9	chr4:9607600-9614200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr4:9607800-9614200	Weak transcription	HUES6 Cell Line	embryonic stem cell
11	chr4:9608000-9612600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr4:9609000-9610000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr4:9609400-9610000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr4:9609800-9610400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
15	chr4:9609800-9611000	Enhancers	Thymus	Thymus
16	chr4:9610000-9610200	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr4:9610000-9610400	Enhancers	Primary T cells fromperipheralblood	blood
18	chr4:9610000-9610400	Enhancers	Primary T helper naive cells from peripheral blood	blood
19	chr4:9610000-9610600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr4:9610200-9610400	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr4:9611000-9619600	Weak transcription	Thymus	Thymus
22	chr4:9612600-9613000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr4:9612800-9613400	Genic enhancers	Fetal Thymus	thymus
24	chr4:9613000-9613200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr4:9613200-9613600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr4:9613400-9613600	Enhancers	Fetal Thymus	thymus
27	chr4:9613600-9616000	Weak transcription	Fetal Thymus	thymus
28	chr4:9615000-9619400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr4:9619400-9621000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
30	chr4:9619400-9621200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr4:9619800-9628200	Weak transcription	Ovary	ovary
32	chr4:9624800-9637600	Weak transcription	Brain Hippocampus Middle	brain
33	chr4:9625200-9629400	Weak transcription	Stomach Smooth Muscle	stomach
34	chr4:9626000-9631000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr4:9626800-9631200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
36	chr4:9627000-9639000	Weak transcription	Brain Inferior Temporal Lobe	brain
37	chr4:9627400-9630600	Weak transcription	Fetal Brain Female	brain
38	chr4:9627800-9634400	Weak transcription	Brain Anterior Caudate	brain
39	chr4:9628200-9630400	Strong transcription	Ovary	ovary
40	chr4:9628600-9630800	Weak transcription	Brain Angular Gyrus	brain
41	chr4:9629400-9630000	Strong transcription	Stomach Smooth Muscle	stomach
42	chr4:9630000-9631600	Weak transcription	Stomach Smooth Muscle	stomach
43	chr4:9630400-9632000	Weak transcription	Ovary	ovary
44	chr4:9634400-9639400	Enhancers	Fetal Thymus	thymus
45	chr4:9637800-9638800	Enhancers	Thymus	Thymus
46	chr4:9640800-9643000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr4:9643000-9643800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr4:9643200-9645800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
49	chr4:9643800-9644000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
50	chr4:9661200-9661400	Enhancers	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links