Variant report

Variant	nsv469621
Chromosome Location	chr4:9987670-10142287
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5800)
CpG islands
(count:3666)
Chromatin interactive
region (count:232)
LncRNA
region (count:17)
Mature miRNA
region (count: 1)
miRNA target
sites (count:0)

(count:5800 , 50 per page) page: 1 2 3 4 5 6 7 ... 116

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:10018550-10019341	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:10008544-10008869	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:10007887-10008235	HepG2	liver:	n/a	n/a
4	ARID3A	chr4:10125192-10125592	HepG2	liver:	n/a	n/a
5	ARID3A	chr4:10076206-10076636	HepG2	liver:	n/a	n/a
6	ARID3A	chr4:10013565-10013836	K562	blood:	n/a	n/a
7	ARID3A	chr4:9998163-9998719	HepG2	liver:	n/a	n/a
8	ARID3A	chr4:10004013-10004296	HepG2	liver:	n/a	n/a
9	ARID3A	chr4:10118478-10119106	K562	blood:	n/a	n/a
10	ARID3A	chr4:10032742-10033066	HepG2	liver:	n/a	n/a
11	ARID3A	chr4:10119476-10119692	K562	blood:	n/a	n/a
12	ARID3A	chr4:10027037-10027405	HepG2	liver:	n/a	n/a
13	ARID3A	chr4:10122672-10123968	HepG2	liver:	n/a	n/a
14	ARID3A	chr4:10118681-10118881	HepG2	liver:	n/a	n/a
15	ARID3A	chr4:10046913-10047474	HepG2	liver:	n/a	n/a
16	ARID3A	chr4:10048100-10048213	HepG2	liver:	n/a	n/a
17	ARID3A	chr4:10020424-10020705	K562	blood:	n/a	n/a
18	ARID3A	chr4:10108260-10108548	K562	blood:	n/a	n/a
19	ARID3A	chr4:10009929-10010129	HepG2	liver:	n/a	n/a
20	ARID3A	chr4:10023038-10023398	HepG2	liver:	n/a	n/a
21	ATF1	chr4:10013493-10013865	K562	blood:	n/a	n/a
22	ATF1	chr4:10108289-10108595	K562	blood:	n/a	n/a
23	ATF1	chr4:10025316-10025600	K562	blood:	n/a	n/a
24	ATF1	chr4:10118542-10118883	K562	blood:	n/a	n/a
25	ATF1	chr4:10011611-10011843	K562	blood:	n/a	n/a
26	ATF1	chr4:10097806-10098386	K562	blood:	n/a	n/a
27	ATF2	chr4:10118991-10119493	GM12878	blood:	n/a	n/a
28	ATF2	chr4:10117657-10118032	H1-hESC	embryonic stem cell:	n/a	n/a
29	ATF2	chr4:10020339-10020818	H1-hESC	embryonic stem cell:	n/a	n/a
30	ATF2	chr4:10073951-10074707	GM12878	blood:	n/a	n/a
31	ATF2	chr4:10097610-10098628	GM12878	blood:	n/a	n/a
32	ATF2	chr4:10112611-10113952	H1-hESC	embryonic stem cell:	n/a	n/a
33	ATF2	chr4:10118586-10119550	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr4:10118639-10119069	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr4:10097507-10098531	GM12878	blood:	n/a	n/a
36	ATF2	chr4:10065076-10065700	H1-hESC	embryonic stem cell:	n/a	n/a
37	ATF2	chr4:10074819-10075282	GM12878	blood:	n/a	n/a
38	ATF2	chr4:10005306-10005725	GM12878	blood:	n/a	n/a
39	ATF2	chr4:10118218-10119845	GM12878	blood:	n/a	n/a
40	ATF2	chr4:10116281-10116639	H1-hESC	embryonic stem cell:	n/a	n/a
41	ATF2	chr4:10116355-10116749	H1-hESC	embryonic stem cell:	n/a	n/a
42	ATF2	chr4:10008534-10009956	GM12878	blood:	n/a	n/a
43	ATF2	chr4:10020411-10021134	GM12878	blood:	n/a	n/a
44	ATF2	chr4:10001436-10002278	GM12878	blood:	n/a	n/a
45	ATF2	chr4:10007851-10008196	GM12878	blood:	n/a	n/a
46	ATF2	chr4:10117273-10117973	H1-hESC	embryonic stem cell:	n/a	n/a
47	ATF2	chr4:10001424-10002312	GM12878	blood:	n/a	n/a
48	ATF2	chr4:9991905-9992354	GM12878	blood:	n/a	n/a
49	ATF2	chr4:10117291-10117950	GM12878	blood:	n/a	n/a
50	ATF2	chr4:10114184-10114609	H1-hESC	embryonic stem cell:	n/a	n/a

(count:3666 , 50 per page) page: 1 2 3 4 5 6 7 ... 74

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:10089919-10089969	GM12892	blood:	n/a
2	chr4:10122153-10122203	HCF	heart:	n/a
3	chr4:10009916-10009966	AG09309	skin:	n/a
4	chr4:10076546-10076596	PANC-1	pancreas:	n/a
5	chr4:10119697-10119747	NH-A	brain:	n/a
6	chr4:10021355-10021405	AG09319	gingival:	n/a
7	chr4:10089919-10089969	GM12892	blood:	n/a
8	chr4:10122153-10122203	HCF	heart:	n/a
9	chr4:10009916-10009966	AG09309	skin:	n/a
10	chr4:10076546-10076596	PANC-1	pancreas:	n/a
11	chr4:10119697-10119747	NH-A	brain:	n/a
12	chr4:10021355-10021405	AG09319	gingival:	n/a
13	chr4:10020360-10020410	ProgFib	skin:	n/a
14	chr4:10042842-10042892	MCF10A-Er-Src	breast:	n/a
15	chr4:10117479-10117529	NHBE	bronchial:	n/a
16	chr4:10041776-10041826	RPTEC	kidney:	n/a
17	chr4:10122153-10122203	GM12891	blood:	n/a
18	chr4:10101400-10101450	GM06990	blood:	n/a
19	chr4:10101400-10101450	H1-hESC	embryonic stem cell:	embryo
20	chr4:10095183-10095233	NT2-D1	testis:	n/a
21	chr4:10020882-10020932	PFSK-1	brain:	n/a
22	chr4:10095183-10095233	HL-60	blood:	n/a
23	chr4:10024364-10024414	GM19239	blood:	n/a
24	chr4:10084725-10084775	GM12878	blood:	n/a
25	chr4:10009916-10009966	NB4	blood:	n/a
26	chr4:10019009-10019059	RPTEC	kidney:	n/a
27	chr4:10021025-10021075	HMEC	breast:	n/a
28	chr4:10086450-10086500	NB4	blood:	n/a
29	chr4:10041776-10041826	U87	brain:	n/a
30	chr4:10077759-10077809	GM12891	blood:	n/a
31	chr4:10020634-10020684	CMK	blood:	n/a
32	chr4:10119810-10119860	AG09319	gingival:	n/a
33	chr4:10021355-10021405	HL-60	blood:	n/a
34	chr4:10023201-10023251	Jurkat	blood:	n/a
35	chr4:10016908-10016958	ovcar-3	ovarian:	n/a
36	chr4:10042198-10042248	T-47D	breast:	n/a
37	chr4:10021025-10021075	HRPEpiC	eye:	n/a
38	chr4:10095183-10095233	AG04449	skin:	fetal
39	chr4:10118984-10119034	HEEpiC	esophagus:	n/a
40	chr4:10079421-10079471	HIPEpiC	eye:	n/a
41	chr4:10118265-10118315	ovcar-3	ovarian:	n/a
42	chr4:10041776-10041826	NB4	blood:	n/a
43	chr4:10084680-10084730	BJ	skin:	n/a
44	chr4:10042842-10042892	AG09319	gingival:	n/a
45	chr4:10020555-10020605	AG09319	gingival:	n/a
46	chr4:10101553-10101603	Hela-S3	cervix:	n/a
47	chr4:9998017-9998067	H1-hESC	embryonic stem cell:	embryo
48	chr4:10110163-10110213	AG04450	lung:	fetal
49	chr4:10052335-10052385	RPTEC	kidney:	n/a
50	chr4:10021025-10021075	HL-60	blood:	n/a

(count:232 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr4:10097844..10099444-chr4:10110623..10112578,2	MCF-7	breast:
2	chr4:10118335..10120046-chr4:15002866..15005679,2	K562	blood:
3	chr4:10117842..10119536-chr4:10257217..10259311,2	K562	blood:
4	chr4:9999925..10002392-chr4:10005670..10008448,2	K562	blood:
5	chr4:9766485..9767197-chr4:10016698..10017481,2	MCF-7	breast:
6	chr4:10096967..10099240-chr4:10119683..10122219,2	MCF-7	breast:
7	chr4:10020627..10022375-chr4:10032476..10035233,2	K562	blood:
8	chr4:10080904..10082503-chr4:10086648..10088570,2	K562	blood:
9	chr4:10008415..10010213-chr4:10011796..10014245,2	K562	blood:
10	chr3:78594989..78595560-chr4:10084887..10085729,2	MCF-7	breast:
11	chr4:10117460..10124392-chr4:10456675..10465032,17	K562	blood:
12	chr4:10119416..10121932-chr4:10294541..10296176,2	K562	blood:
13	chr4:10122860..10124582-chr4:10454402..10456296,2	K562	blood:
14	chr4:9764370..9765339-chr4:10015197..10016013,4	MCF-7	breast:
15	chr4:10019909..10022554-chr4:10120525..10123585,3	K562	blood:
16	chr4:10100289..10102806-chr4:10104865..10109252,4	MCF-7	breast:
17	chr4:10094612..10097363-chr4:10100494..10103586,3	MCF-7	breast:
18	chr4:9770192..9773137-chr4:10024212..10026749,2	K562	blood:
19	chr4:10109397..10110994-chr4:10487986..10490652,2	K562	blood:
20	chr4:10092915..10094624-chr4:10096149..10098338,2	MCF-7	breast:
21	chr4:10020071..10021146-chr4:10064556..10066056,33	MCF-7	breast:
22	chr4:10008415..10010213-chr4:10011796..10014245,2	K562	blood:
23	chr12:56510382..56511099-chr4:10117719..10118272,2	Hela-S3	cervix:
24	chr4:10009870..10011594-chr4:10018076..10020950,2	MCF-7	breast:
25	chr4:10089641..10094747-chr4:10094922..10099608,4	MCF-7	breast:
26	chr4:10124627..10126326-chr4:10129593..10131682,2	MCF-7	breast:
27	chr4:10041255..10044577-chr4:10118999..10121902,3	K562	blood:
28	chr4:10120325..10123218-chr4:10371729..10374334,2	K562	blood:
29	chr4:10060964..10064937-chr4:10066932..10071092,4	K562	blood:
30	chr4:10013756..10016342-chr4:10019504..10023873,3	K562	blood:
31	chr4:9957351..9959521-chr4:10008550..10011275,2	MCF-7	breast:
32	chr4:10080904..10082503-chr4:10086648..10088570,2	K562	blood:
33	chr4:10060964..10064937-chr4:10066932..10071092,4	K562	blood:
34	chr4:10120712..10122224-chr4:10551588..10553224,2	K562	blood:
35	chr4:10015413..10017936-chr4:10018958..10020655,2	MCF-7	breast:
36	chr4:10083243..10085127-chr4:10085254..10087510,2	K562	blood:
37	chr4:10141623..10144820-chr4:10145857..10148531,3	K562	blood:
38	chr15:65596761..65597431-chr4:10118051..10119234,3	NB4	blood:
39	chr4:10080344..10083261-chr4:10099505..10101850,2	MCF-7	breast:
40	chr4:10124769..10127534-chr4:10135159..10136966,2	MCF-7	breast:
41	chr4:10117020..10119192-chr4:10169153..10171156,2	MCF-7	breast:
42	chr1:155532125..155532716-chr4:10117868..10118382,2	HCT-116	colon:
43	chr4:10120346..10122071-chr4:10783813..10786571,2	MCF-7	breast:
44	chr4:10008558..10010473-chr4:10063451..10065782,2	MCF-7	breast:
45	chr4:10100545..10102882-chr4:10446695..10448873,2	K562	blood:
46	chr4:10019482..10021014-chr4:10065089..10066567,17	MCF-7	breast:
47	chr4:10061810..10065204-chr4:10068602..10071736,4	MCF-7	breast:
48	chr4:10118323..10118922-chr9:88896214..88897112,2	Hela-S3	cervix:
49	chr4:10133192..10134746-chr4:10556529..10559334,2	K562	blood:
50	chr4:10094579..10097244-chr4:10117506..10119251,2	MCF-7	breast:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-WDR1-3	chr4:10036546-10037004	NONHSAT095155
2	lnc-DRD5-3	chr4:10072875-10073254	XLOC_003449
3	lnc-WDR1-1	chr4:10069715-10071448	ENSG00000249822
4	lnc-DRD5-2	chr4:10011102-10011349	ENSG00000250413.1
5	lnc-WDR1-5	chr4:10030642-10030924	NONHSAT095152
6	lnc-WDR1-5	chr4:10027348-10027630	NONHSAT095152
7	lnc-DRD5-2	chr4:10008106-10008316	ENSG00000250413.1
8	lnc-WDR1-3	chr4:10035858-10036380	NONHSAT095155
9	lnc-WDR1-3	chr4:10035849-10037764	NONHSAT095153
10	lnc-WDR1-1	chr4:10072870-10074643	ENSG00000249822
11	lnc-WDR1-3	chr4:10036546-10037004	NONHSAT095154
12	lnc-WDR1-1	chr4:10072870-10074643	ENSG00000261490.1
13	lnc-DRD5-3	chr4:10069734-10071453	XLOC_003449
14	lnc-WDR1-1	chr4:10069713-10071448	ENSG00000261490.1
15	lnc-WDR1-3	chr4:10035858-10036286	NONHSAT095154
16	lnc-WDR1-3	chr4:10041754-10042012	NONHSAT095153
17	lnc-SLC2A9-3	chr4:10075968-10076289	NONHSAT095158

miRNA name	Chromosome Location	mirBase accession
hsa-miR-3138	chr4:10080246-10080269	MIMAT0015006

No data

Variant related genes	Relation type
RNA5SP155	TF binding region
ENSG00000250413	TF binding region
MIR3138	TF binding region
WDR1	TF binding region
ENSG00000261490	TF binding region
SLC2A9	TF binding region
RNA5SP155	CpG island
ENSG00000250413	CpG island
MIR3138	CpG island
WDR1	CpG island
ENSG00000261490	CpG island
SLC2A9	CpG island
ENSG00000200156	chromatin interactions
ENSG00000131373	chromatin interactions
ENSG00000137449	chromatin interactions
ENSG00000271544	chromatin interactions
ENSG00000248777	chromatin interactions
ENSG00000223086	chromatin interactions
ENSG00000250393	chromatin interactions
ENSG00000199377	chromatin interactions
ENSG00000145390	chromatin interactions
ENSG00000172732	chromatin interactions
ENSG00000135070	chromatin interactions
ENSG00000109667	chromatin interactions
ENSG00000273338	chromatin interactions
ENSG00000116161	chromatin interactions
ENSG00000169814	chromatin interactions
ENSG00000233554	chromatin interactions
ENSG00000250074	chromatin interactions
ENSG00000198374	chromatin interactions
ENSG00000250613	chromatin interactions
ENSG00000201801	chromatin interactions
ENSG00000162616	chromatin interactions
ENSG00000137203	chromatin interactions
ENSG00000261490	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000178636	chromatin interactions
ENSG00000163527	chromatin interactions
ENSG00000116539	chromatin interactions
ENSG00000071127	chromatin interactions
ENSG00000178163	chromatin interactions
ENSG00000156983	chromatin interactions
ENSG00000264931	chromatin interactions
ENSG00000250413	chromatin interactions
ENSG00000251296	chromatin interactions
ENSG00000086062	chromatin interactions
ENSG00000144029	chromatin interactions
ENSG00000150459	chromatin interactions
ENSG00000256316	chromatin interactions
ENSG00000247624	chromatin interactions
ENSG00000229117	chromatin interactions
ENSG00000250040	chromatin interactions
ENSG00000214174	chromatin interactions
ZFHX3	miRNA target sites
KIF5B	miRNA target sites

Extended variants
information (count: 8584 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:8584 , 50 per page) page: 1 2 3 4 5 6 7 ... 172

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs573303145	chr4:9987700-9987701	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs73805443	chr4:9987715-9987716	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs16891746	chr4:9987722-9987723	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs111497146	chr4:9987757-9987758	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs114533535	chr4:9987837-9987838	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs150138281	chr4:9987855-9987856	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs541759509	chr4:9987950-9987951	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs553285114	chr4:9987976-9987977	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs566379053	chr4:9987977-9987978	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs542442458	chr4:9987993-9987994	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs563341925	chr4:9988043-9988044	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs74376712	chr4:9988075-9988076	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs560694717	chr4:9988170-9988171	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs371653051	chr4:9988179-9988180	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs374645264	chr4:9988190-9988191	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs527973162	chr4:9988191-9988192	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs34188056	chr4:9988207-9988208	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs549666711	chr4:9988213-9988214	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs180738026	chr4:9988274-9988275	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs138616283	chr4:9988392-9988393	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs186332502	chr4:9988487-9988488	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs192074043	chr4:9988497-9988498	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs546832431	chr4:9988523-9988524	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs113244927	chr4:9988538-9988539	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs529027185	chr4:9988549-9988550	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs386671577	chr4:9988601-9988602	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs186972585	chr4:9988602-9988603	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs191808930	chr4:9988604-9988605	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs182718034	chr4:9988606-9988607	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs552137086	chr4:9988610-9988611	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs185529041	chr4:9988638-9988639	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs534714161	chr4:9988661-9988662	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs189947156	chr4:9988681-9988682	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs114149118	chr4:9988692-9988693	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs112709674	chr4:9988800-9988801	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs116605083	chr4:9988802-9988803	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs557620264	chr4:9988864-9988865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs182410352	chr4:9988882-9988883	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs575388020	chr4:9988974-9988975	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs564549106	chr4:9989029-9989030	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs16868271	chr4:9989047-9989048	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs549814877	chr4:9989059-9989060	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs370574300	chr4:9989066-9989067	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs186687371	chr4:9989085-9989086	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs572751647	chr4:9989123-9989124	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs193146811	chr4:9989135-9989136	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs142869655	chr4:9989220-9989221	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs561613538	chr4:9989226-9989227	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs529183376	chr4:9989229-9989230	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs4385059	chr4:9989233-9989234	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Colorectal cancer	16272173	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	17603634	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Colorectal cancer	19359472	CNVD
Neuroblastoma	17533364	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Cancer	21637783	CNVD
Melanoma	21693616	CNVD
Squamous cell cancer	21044232	CNVD
Colorectal cancer	20709793	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Non-small cell lung cancer	21044232	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	17387387	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Cervical cancer	21062161	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Neuroblastoma	18923191	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Prostate cancer	18632612	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Breast cancer	21785460	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21509527	CNVD
Lung cancer	18438408	CNVD
Myelofibrosis	22110671	CNVD
Hirschsprung''s Disease	21712996	CNVD
Schizophrenia	22241247	CNVD
Autosomal-dominant microtia	18179897	CNVD
Glioma	17123091	CNVD
Colorectal cancer	20459617	CNVD
Breast cancer	17133270	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21858162	CNVD
small cell lung cancer	20016488	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	17142309	CNVD
Schizophrenia	23813976	CNVD
Glioma	20126413	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	22522925	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:4711 , 50 per page) page: 1 2 3 4 5 6 7 ... 95

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:9963400-9996400	Weak transcription	Adipose Nuclei	Adipose
2	chr4:9970000-9988600	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr4:9970000-9989800	Weak transcription	Rectal Smooth Muscle	rectum
4	chr4:9970600-9991200	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr4:9972200-9988200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr4:9972200-9988400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr4:9972800-9988600	Strong transcription	Primary monocytes fromperipheralblood	blood
8	chr4:9974200-9989000	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr4:9974200-9990400	Weak transcription	HSMMtube	muscle
10	chr4:9977600-9988200	Strong transcription	HepG2	liver
11	chr4:9977800-10003600	Weak transcription	Fetal Muscle Leg	muscle
12	chr4:9978200-9988200	Strong transcription	NHEK	skin
13	chr4:9978200-9996400	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr4:9978800-9995400	Weak transcription	Rectal Mucosa Donor 31	rectum
15	chr4:9979800-9995600	Weak transcription	Colonic Mucosa	Colon
16	chr4:9980800-10007200	Weak transcription	Duodenum Smooth Muscle	Duodenum
17	chr4:9981000-9989800	Weak transcription	Stomach Mucosa	stomach
18	chr4:9981200-9989800	Weak transcription	Brain Substantia Nigra	brain
19	chr4:9981400-9991800	Weak transcription	Brain Angular Gyrus	brain
20	chr4:9982800-10002800	Weak transcription	Gastric	stomach
21	chr4:9983000-9989600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr4:9983000-9991200	Weak transcription	Brain Cingulate Gyrus	brain
23	chr4:9983000-9992200	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr4:9983000-9995600	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr4:9983400-9988000	Strong transcription	Fetal Intestine Large	intestine
26	chr4:9983800-9988200	Strong transcription	Liver	Liver
27	chr4:9985200-9988000	Strong transcription	Duodenum Mucosa	Duodenum
28	chr4:9985200-9988200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
29	chr4:9985600-9988000	Weak transcription	Colon Smooth Muscle	Colon
30	chr4:9985800-9997400	Strong transcription	HMEC	breast
31	chr4:9986600-9987800	Strong transcription	Brain Hippocampus Middle	brain
32	chr4:9987000-9988400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr4:9987200-9987800	Strong transcription	Left Ventricle	heart
34	chr4:9987400-9988000	ZNF genes & repeats	Esophagus	oesophagus
35	chr4:9987400-9988200	ZNF genes & repeats	Fetal Intestine Small	intestine
36	chr4:9987400-9996400	Weak transcription	Aorta	Aorta
37	chr4:9987600-9989600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
38	chr4:9987600-9998000	Weak transcription	Ovary	ovary
39	chr4:9987600-10008000	Weak transcription	Stomach Smooth Muscle	stomach
40	chr4:9987800-9988200	ZNF genes & repeats	Left Ventricle	heart
41	chr4:9987800-9989600	Weak transcription	Brain Hippocampus Middle	brain
42	chr4:9988000-9988600	Enhancers	Colon Smooth Muscle	Colon
43	chr4:9988000-9989400	Weak transcription	Duodenum Mucosa	Duodenum
44	chr4:9988000-9989600	Weak transcription	Fetal Intestine Large	intestine
45	chr4:9988000-9990000	Weak transcription	Fetal Stomach	stomach
46	chr4:9988000-9995000	Weak transcription	Esophagus	oesophagus
47	chr4:9988200-9989600	Weak transcription	Fetal Intestine Small	intestine
48	chr4:9988200-9989600	Weak transcription	HepG2	liver
49	chr4:9988200-9991200	Weak transcription	Left Ventricle	heart
50	chr4:9988200-9991400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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