Variant report
Variant | nsv469723 |
---|---|
Chromosome Location | chr14:106252705-106406096 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:1691)
- CpG islands (count:2687)
- Chromatin interactive region (count:33)
- LncRNA region (count:64)
- Mature miRNA region (count: 4)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ATF2 | chr14:106326435-106327466 | GM12878 | blood: | n/a | n/a |
2 | ATF2 | chr14:106394149-106394677 | GM12878 | blood: | n/a | n/a |
3 | ATF2 | chr14:106325826-106330580 | GM12878 | blood: | n/a | n/a |
4 | ATF2 | chr14:106327604-106330367 | GM12878 | blood: | n/a | n/a |
5 | ATF2 | chr14:106374323-106374667 | GM12878 | blood: | n/a | n/a |
6 | BATF | chr14:106327592-106328107 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr14:106328109-106328609 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr14:106327898-106328592 | GM12878 | blood: | n/a | n/a |
9 | BCL11A | chr14:106328152-106328632 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 |
10 | BCL11A | chr14:106319034-106319214 | GM12878 | blood: | n/a | n/a |
11 | BCL11A | chr14:106323521-106323980 | GM12878 | blood: | n/a | n/a |
12 | BCL11A | chr14:106322004-106322977 | GM12878 | blood: | n/a | n/a |
13 | BCL11A | chr14:106324185-106324497 | GM12878 | blood: | n/a | n/a |
14 | BCL11A | chr14:106316833-106317237 | GM12878 | blood: | n/a | n/a |
15 | BCL11A | chr14:106323173-106323467 | GM12878 | blood: | n/a | n/a |
16 | BCL11A | chr14:106316707-106317269 | GM12878 | blood: | n/a | n/a |
17 | BCL11A | chr14:106325818-106326046 | GM12878 | blood: | n/a | n/a |
18 | BCL11A | chr14:106328036-106328667 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 |
19 | BCL11A | chr14:106319294-106320082 | GM12878 | blood: | n/a | chr14:106319625-106319634 |
20 | BCL11A | chr14:106324874-106325180 | GM12878 | blood: | n/a | n/a |
21 | BCL11A | chr14:106318409-106318664 | GM12878 | blood: | n/a | n/a |
22 | BCL11A | chr14:106324965-106326185 | GM12878 | blood: | n/a | n/a |
23 | BCL11A | chr14:106319449-106320098 | GM12878 | blood: | n/a | chr14:106319625-106319634 |
24 | BCL11A | chr14:106325434-106325655 | GM12878 | blood: | n/a | n/a |
25 | BCL3 | chr14:106328122-106328794 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 |
26 | BCL3 | chr14:106392362-106392601 | GM12878 | blood: | n/a | n/a |
27 | BCL3 | chr14:106397708-106398393 | GM12878 | blood: | n/a | n/a |
28 | BCL3 | chr14:106393061-106393511 | GM12878 | blood: | n/a | chr14:106393269-106393282 |
29 | BCL3 | chr14:106396786-106397039 | GM12878 | blood: | n/a | n/a |
30 | BCL3 | chr14:106328757-106329000 | GM12878 | blood: | n/a | n/a |
31 | BCL3 | chr14:106325886-106326530 | GM12878 | blood: | n/a | n/a |
32 | BCL3 | chr14:106397844-106398380 | GM12878 | blood: | n/a | n/a |
33 | BCL3 | chr14:106393892-106394943 | GM12878 | blood: | n/a | n/a |
34 | BCL3 | chr14:106326095-106326609 | GM12878 | blood: | n/a | n/a |
35 | BCL3 | chr14:106328210-106328666 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 |
36 | BCL3 | chr14:106396500-106396781 | GM12878 | blood: | n/a | n/a |
37 | BCL3 | chr14:106394993-106396201 | GM12878 | blood: | n/a | n/a |
38 | BCLAF1 | chr14:106373746-106374746 | GM12878 | blood: | n/a | chr14:106374419-106374428 |
39 | BCLAF1 | chr14:106325318-106325552 | GM12878 | blood: | n/a | n/a |
40 | BCLAF1 | chr14:106369035-106369920 | GM12878 | blood: | n/a | n/a |
41 | BCLAF1 | chr14:106370411-106370714 | GM12878 | blood: | n/a | n/a |
42 | BCLAF1 | chr14:106325612-106330692 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 chr14:106327500-106327513 |
43 | BCLAF1 | chr14:106318987-106320224 | GM12878 | blood: | n/a | chr14:106319625-106319634 |
44 | BCLAF1 | chr14:106318548-106318768 | GM12878 | blood: | n/a | n/a |
45 | BCLAF1 | chr14:106325719-106330912 | GM12878 | blood: | n/a | chr14:106328262-106328271 chr14:106328230-106328239 chr14:106327500-106327513 |
46 | BCLAF1 | chr14:106394485-106394806 | GM12878 | blood: | n/a | n/a |
47 | BHLHE40 | chr14:106267341-106267400 | HepG2 | liver: | n/a | n/a |
48 | BHLHE40 | chr14:106302852-106302870 | GM12878 | blood: | n/a | n/a |
49 | BHLHE40 | chr14:106317405-106322462 | GM12878 | blood: | n/a | chr14:106318900-106318916 |
50 | BHLHE40 | chr14:106267595-106267837 | K562 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:106361667-106361717 | PrEC | prostate: | n/a |
2 | chr14:106320748-106320798 | ECC-1 | luminal epithelium: | n/a |
3 | chr14:106319730-106319780 | GM12878 | blood: | n/a |
4 | chr14:106361667-106361717 | PrEC | prostate: | n/a |
5 | chr14:106320748-106320798 | ECC-1 | luminal epithelium: | n/a |
6 | chr14:106319730-106319780 | GM12878 | blood: | n/a |
7 | chr14:106363051-106363101 | CMK | blood: | n/a |
8 | chr14:106366523-106366573 | GM06990 | blood: | n/a |
9 | chr14:106320669-106320719 | PANC-1 | pancreas: | n/a |
10 | chr14:106307030-106307080 | SKMC | muscle: | n/a |
11 | chr14:106306929-106306979 | BE2_C | brain: | n/a |
12 | chr14:106361618-106361668 | GM12878 | blood: | n/a |
13 | chr14:106363051-106363101 | Hela-S3 | cervix: | n/a |
14 | chr14:106366503-106366553 | HAEpiC | amniotic membrane: | n/a |
15 | chr14:106313769-106313819 | SK-N-MC | brain: | n/a |
16 | chr14:106306929-106306979 | NHDF-neo | bronchial: | n/a |
17 | chr14:106321936-106321986 | GM12891 | blood: | n/a |
18 | chr14:106361667-106361717 | AG10803 | skin: | n/a |
19 | chr14:106306929-106306979 | MCF-7 | breast: | n/a |
20 | chr14:106329607-106329657 | Hela-S3 | cervix: | n/a |
21 | chr14:106317313-106317363 | HPAEpiC | pulmonary alveolar: | n/a |
22 | chr14:106320748-106320798 | NB4 | blood: | n/a |
23 | chr14:106394764-106394814 | Hela-S3 | cervix: | n/a |
24 | chr14:106321936-106321986 | BE2_C | brain: | n/a |
25 | chr14:106366523-106366573 | GM19239 | blood: | n/a |
26 | chr14:106373308-106373358 | SAEC | small airway: | n/a |
27 | chr14:106361618-106361668 | LNCaP | prostate: | n/a |
28 | chr14:106373308-106373358 | HRPEpiC | eye: | n/a |
29 | chr14:106321226-106321276 | HIPEpiC | eye: | n/a |
30 | chr14:106313769-106313819 | HUVEC | blood vessel: | n/a |
31 | chr14:106317313-106317363 | GM19239 | blood: | n/a |
32 | chr14:106363051-106363101 | Hepatocyte | liver: | n/a |
33 | chr14:106374384-106374434 | HUVEC | blood vessel: | n/a |
34 | chr14:106307030-106307080 | H1-hESC | embryonic stem cell: | embryo |
35 | chr14:106354912-106354962 | ovcar-3 | ovarian: | n/a |
36 | chr14:106361618-106361668 | GM12891 | blood: | n/a |
37 | chr14:106329206-106329256 | HUVEC | blood vessel: | n/a |
38 | chr14:106361618-106361668 | AoSMC | blood vessel: | n/a |
39 | chr14:106363051-106363101 | GM12892 | blood: | n/a |
40 | chr14:106333603-106333653 | GM12878 | blood: | n/a |
41 | chr14:106382755-106382805 | Caco-2 | colon: | n/a |
42 | chr14:106333603-106333653 | Caco-2 | colon: | n/a |
43 | chr14:106366523-106366573 | Hepatocyte | liver: | n/a |
44 | chr14:106329206-106329256 | HL-60 | blood: | n/a |
45 | chr14:106333919-106333969 | IMR90 | lung: | fetal |
46 | chr14:106374554-106374604 | A549 | lung: | n/a |
47 | chr14:106329607-106329657 | MCF10A-Er-Src | breast: | n/a |
48 | chr14:106361618-106361668 | A549 | lung: | n/a |
49 | chr14:106361640-106361690 | HCPEpiC | choroid plexus: | n/a |
50 | chr14:106394764-106394814 | Caco-2 | colon: | n/a |
(count:33 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:106276485..106277986-chr14:106279543..106281690,2 | MCF-7 | breast: | |
2 | chr14:106353674..106356669-chr14:106359643..106361193,2 | MCF-7 | breast: | |
3 | chr14:106328114..106329780-chr14:106329948..106332009,2 | MCF-7 | breast: | |
4 | chr14:106287731..106289344-chr14:106305806..106307641,2 | MCF-7 | breast: | |
5 | chr14:106390866..106392528-chr14:106395486..106397843,2 | MCF-7 | breast: | |
6 | chr14:106361128..106362815-chr14:106369231..106371308,2 | MCF-7 | breast: | |
7 | chr14:106357610..106359618-chr14:106363660..106366186,2 | MCF-7 | breast: | |
8 | chr14:106331478..106333365-chr14:106353559..106356151,2 | MCF-7 | breast: | |
9 | chr14:106276485..106277986-chr14:106279543..106281690,2 | MCF-7 | breast: | |
10 | chr14:106390866..106392528-chr14:106395486..106397843,2 | MCF-7 | breast: | |
11 | chr14:106272339..106275249-chr14:106284061..106286088,2 | MCF-7 | breast: | |
12 | chr14:106331478..106333365-chr14:106353559..106356151,2 | MCF-7 | breast: | |
13 | chr14:106330195..106331728-chr14:106342467..106345294,2 | MCF-7 | breast: | |
14 | chr14:106370557..106373141-chr14:106373296..106374958,2 | MCF-7 | breast: | |
15 | chr14:106287731..106289344-chr14:106305806..106307641,2 | MCF-7 | breast: | |
16 | chr14:105486934..105489265-chr14:106372865..106374868,2 | MCF-7 | breast: | |
17 | chr14:106395125..106397602-chr14:106398422..106401278,2 | MCF-7 | breast: | |
18 | chr14:106369157..106371696-chr14:106380608..106383317,2 | MCF-7 | breast: | |
19 | chr14:106395125..106397602-chr14:106398422..106401278,2 | MCF-7 | breast: | |
20 | chr14:106357610..106359618-chr14:106363660..106366186,2 | MCF-7 | breast: | |
21 | chr14:106361128..106362815-chr14:106369231..106371308,2 | MCF-7 | breast: | |
22 | chr14:106353674..106356669-chr14:106359643..106361193,2 | MCF-7 | breast: | |
23 | chr14:106328114..106329780-chr14:106329948..106332009,2 | MCF-7 | breast: | |
24 | chr14:106372333..106374571-chr14:106380876..106383097,3 | MCF-7 | breast: | |
25 | chr14:106364751..106367289-chr14:106367853..106369994,2 | MCF-7 | breast: | |
26 | chr14:106134957..106136914-chr14:106350161..106352785,2 | MCF-7 | breast: | |
27 | chr14:106272339..106275249-chr14:106284061..106286088,2 | MCF-7 | breast: | |
28 | chr14:106369157..106371696-chr14:106380608..106383317,2 | MCF-7 | breast: | |
29 | chr14:106275048..106276567-chr14:106290274..106293230,2 | MCF-7 | breast: | |
30 | chr14:106372333..106374571-chr14:106380876..106383097,3 | MCF-7 | breast: | |
31 | chr14:106364751..106367289-chr14:106367853..106369994,2 | MCF-7 | breast: | |
32 | chr12:125397315..125399250-chr14:106297763..106299810,2 | MCF-7 | breast: | |
33 | chr14:106275048..106276567-chr14:106290274..106293230,2 | MCF-7 | breast: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-AL901608.1-11 | chr14:106382548-106382559 | NONHSAT040368 |
2 | lnc-TMEM121-2 | chr14:106322022-106322322 | NONHSAT040404 |
3 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040368 |
4 | lnc-AL901608.1-3 | chr14:106330427-106330469 | NONHSAT040431 |
5 | lnc-KIAA0125-1 | chr14:106360751-106360856 | ENSG00000244620 |
6 | lnc-TMEM121-2 | chr14:106322147-106322322 | NONHSAT040407 |
7 | lnc-TMEM121-2 | chr14:106329409-106329491 | NONHSAT040400 |
8 | lnc-TMEM121-2 | chr14:106330798-106330839 | NONHSAT040402 |
9 | lnc-KIAA0125-4 | chr14:106388058-106388203 | NONHSAT040447 |
10 | lnc-KIAA0125-4 | chr14:106388400-106388531 | NONHSAT040448 |
11 | lnc-AL901608.1-3 | chr14:106330799-106330862 | NONHSAT040436 |
12 | lnc-TMEM121-2 | chr14:106330426-106330471 | NONHSAT040404 |
13 | lnc-AL901608.1-3 | chr14:106330426-106330459 | NONHSAT040428 |
14 | lnc-KIAA0125-1 | chr14:106360504-106360539 | ENSG00000244620 |
15 | lnc-TMEM121-2 | chr14:106330426-106330471 | NONHSAT040407 |
16 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040371 |
17 | lnc-TMEM121-2 | chr14:106330427-106330470 | NONHSAT040430 |
18 | lnc-AL901608.1-3 | chr14:106330798-106330846 | NONHSAT040435 |
19 | lnc-AL901608.1-3 | chr14:106329408-106329450 | NONHSAT040387 |
20 | lnc-TMEM121-2 | chr14:106321999-106322322 | NONHSAT040400 |
21 | lnc-KIAA0125-1 | chr14:106361841-106361967 | ENSG00000244620 |
22 | lnc-AL901608.1-3 | chr14:106330799-106330862 | NONHSAT040437 |
23 | lnc-AL901608.1-11 | chr14:106382548-106382559 | NONHSAT040370 |
24 | lnc-TMEM121-2 | chr14:106331410-106331467 | NONHSAT040409 |
25 | lnc-AL901608.1-3 | chr14:106331432-106331480 | NONHSAT040440 |
26 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040373 |
27 | lnc-AL901608.1-3 | chr14:106331432-106331467 | NONHSAT040439 |
28 | lnc-TMEM121-2 | chr14:106330002-106330847 | NONHSAT040379 |
29 | lnc-TMEM121-2 | chr14:106322052-106322322 | NONHSAT040405 |
30 | lnc-AL901608.1-3 | chr14:106330798-106330843 | NONHSAT040434 |
31 | lnc-TMEM121-2 | chr14:106322010-106322322 | NONHSAT040401 |
32 | lnc-AL901608.1-3 | chr14:106380217-106380239 | NONHSAT040434 |
33 | lnc-AL901608.1-11 | chr14:106359452-106359463 | NONHSAT040371 |
34 | lnc-AL901608.1-11 | chr14:106359452-106359463 | NONHSAT040374 |
35 | lnc-AL901608.1-11 | chr14:106359452-106359463 | NONHSAT040373 |
36 | lnc-AL901608.1-3 | chr14:106330000-106330082 | NONHSAT040421 |
37 | lnc-TMEM121-2 | chr14:106322223-106322322 | NONHSAT040409 |
38 | lnc-AL901608.1-11 | chr14:106359452-106359463 | NONHSAT040366 |
39 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040366 |
40 | lnc-AL901608.1-3 | chr14:106330426-106330468 | NONHSAT140181 |
41 | lnc-AL901608.1-3 | chr14:106330427-106330490 | NONHSAT040432 |
42 | lnc-AL901608.1-3 | chr14:106330426-106330461 | NONHSAT040426 |
43 | lnc-TMEM121-2 | chr14:106322021-106322322 | NONHSAT040402 |
44 | lnc-TMEM121-2 | chr14:106322130-106322322 | NONHSAT040406 |
45 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040370 |
46 | lnc-TMEM121-2 | chr14:106330798-106330868 | NONHSAT040406 |
47 | lnc-AL901608.1-3 | chr14:106330426-106330464 | NONHSAT040427 |
48 | lnc-AL901608.1-3 | chr14:106332023-106332023 | NONHSAT040435 |
49 | lnc-AL901608.1-11 | chr14:106344966-106345008 | NONHSAT040374 |
50 | lnc-KIAA0125-4 | chr14:106387977-106388203 | NONHSAT040448 |
miRNA name | Chromosome Location | mirBase accession |
---|---|---|
hsa-miR-4539 | chr14:106323682-106323703 | MIMAT0019082 |
hsa-miR-4537 | chr14:106325701-106325722 | MIMAT0019080 |
hsa-miR-4507 | chr14:106324294-106324313 | MIMAT0019044 |
hsa-miR-4538 | chr14:106324390-106324411 | MIMAT0019081 |
No data |
Variant related genes | Relation type |
---|---|
IGHJ1P | TF binding region |
IGHD1-20 | TF binding region |
IGHD2-15 | TF binding region |
IGHJ1 | TF binding region |
IGHD2-2 | TF binding region |
IGHD1-7 | TF binding region |
IGHJ4 | TF binding region |
IGHD3-16 | TF binding region |
IGHD4-11 | TF binding region |
IGHD5-24 | TF binding region |
ENSG00000265517 | TF binding region |
ENSG00000265714 | TF binding region |
ENSG00000264473 | TF binding region |
IGHM | TF binding region |
IGHJ6 | TF binding region |
IGHD5-5 | TF binding region |
IGHD3-10 | TF binding region |
IGHD4-17 | TF binding region |
IGHD6-6 | TF binding region |
IGHJ3P | TF binding region |
IGHD1-14 | TF binding region |
ENSG00000264781 | TF binding region |
IGHD | TF binding region |
IGHD4-4 | TF binding region |
IGHD3-22 | TF binding region |
IGHD6-25 | TF binding region |
IGHD1-1 | TF binding region |
IGHD3-9 | TF binding region |
ENSG00000266408 | TF binding region |
IGHJ2P | TF binding region |
IGHD2-21 | TF binding region |
IGHD6-13 | TF binding region |
IGHD5-18 | TF binding region |
ENSG00000266706 | TF binding region |
KIAA0125 | TF binding region |
IGHD4-23 | TF binding region |
IGHJ2 | TF binding region |
IGHD1-26 | TF binding region |
IGHD2-8 | TF binding region |
IGHD7-27 | TF binding region |
ENSG00000263751 | TF binding region |
IGHD3-3 | TF binding region |
IGHJ3 | TF binding region |
ENSG00000265612 | TF binding region |
ENSG00000244620 | TF binding region |
ENSG00000270371 | TF binding region |
IGHD6-19 | TF binding region |
IGHD5-12 | TF binding region |
IGHJ5 | TF binding region |
IGHJ1P | CpG island |
IGHD1-20 | CpG island |
IGHD2-15 | CpG island |
IGHJ1 | CpG island |
IGHD2-2 | CpG island |
IGHD1-7 | CpG island |
IGHJ4 | CpG island |
IGHD3-16 | CpG island |
IGHD4-11 | CpG island |
IGHD5-24 | CpG island |
ENSG00000265517 | CpG island |
ENSG00000265714 | CpG island |
ENSG00000264473 | CpG island |
IGHM | CpG island |
IGHJ6 | CpG island |
IGHD5-5 | CpG island |
IGHD3-10 | CpG island |
IGHD4-17 | CpG island |
IGHD6-6 | CpG island |
IGHJ3P | CpG island |
IGHD1-14 | CpG island |
ENSG00000264781 | CpG island |
IGHD | CpG island |
IGHD4-4 | CpG island |
IGHD3-22 | CpG island |
IGHD6-25 | CpG island |
IGHD1-1 | CpG island |
IGHD3-9 | CpG island |
ENSG00000266408 | CpG island |
IGHJ2P | CpG island |
IGHD2-21 | CpG island |
IGHD6-13 | CpG island |
IGHD5-18 | CpG island |
ENSG00000266706 | CpG island |
KIAA0125 | CpG island |
IGHD4-23 | CpG island |
IGHJ2 | CpG island |
IGHD1-26 | CpG island |
IGHD2-8 | CpG island |
IGHD7-27 | CpG island |
ENSG00000263751 | CpG island |
IGHD3-3 | CpG island |
IGHJ3 | CpG island |
ENSG00000265612 | CpG island |
ENSG00000244620 | CpG island |
ENSG00000270371 | CpG island |
IGHD6-19 | CpG island |
IGHD5-12 | CpG island |
IGHJ5 | CpG island |
ENSG00000211912 | chromatin interactions |
ENSG00000240041 | chromatin interactions |
ENSG00000227335 | chromatin interactions |
ENSG00000237111 | chromatin interactions |
ENSG00000242472 | chromatin interactions |
ENSG00000227108 | chromatin interactions |
ENSG00000244620 | chromatin interactions |
ENSG00000211905 | chromatin interactions |
ENSG00000211925 | chromatin interactions |
ENSG00000211915 | chromatin interactions |
ENSG00000236597 | chromatin interactions |
ENSG00000227800 | chromatin interactions |
ENSG00000211900 | chromatin interactions |
ENSG00000211921 | chromatin interactions |
ENSG00000211920 | chromatin interactions |
ENSG00000232543 | chromatin interactions |
ENSG00000211904 | chromatin interactions |
ENSG00000211917 | chromatin interactions |
ENSG00000150991 | chromatin interactions |
ENSG00000170779 | chromatin interactions |
ENSG00000211924 | chromatin interactions |
ENSG00000211923 | chromatin interactions |
ENSG00000237547 | chromatin interactions |
ENSG00000242887 | chromatin interactions |
ENSG00000211918 | chromatin interactions |
ENSG00000211931 | chromatin interactions |
ENSG00000253755 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs74093886 | chr14:106252792-106252793 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs570234698 | chr14:106252823-106252824 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs35328557 | chr14:106252850-106252851 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs141141604 | chr14:106252872-106252873 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs537310900 | chr14:106252953-106252954 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs139904936 | chr14:106252996-106252997 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs10145102 | chr14:106253092-106253093 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
8 | rs79549442 | chr14:106253176-106253177 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs2725176 | chr14:106253183-106253184 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
10 | rs150910438 | chr14:106259229-106259230 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs562311952 | chr14:106259249-106259250 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs189569467 | chr14:106259285-106259286 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs551343551 | chr14:106259346-106259347 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs560572730 | chr14:106259388-106259389 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs192974329 | chr14:106259405-106259406 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs549482847 | chr14:106259433-106259434 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs567746586 | chr14:106259438-106259439 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs184293141 | chr14:106259439-106259440 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs369691669 | chr14:106259482-106259483 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs188349876 | chr14:106259486-106259487 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs367657149 | chr14:106259537-106259538 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs550419906 | chr14:106259631-106259632 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs12894831 | chr14:106259642-106259643 | ZNF genes & repeats Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
24 | rs539328965 | chr14:106259650-106259651 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs117111862 | chr14:106259698-106259699 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
26 | rs138363494 | chr14:106259749-106259750 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
27 | rs78627922 | chr14:106259753-106259754 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
28 | rs79574199 | chr14:106259769-106259770 | ZNF genes & repeats Enhancers | n/a | n/a | Overlapped CNVs | n/a |
29 | rs2753578 | chr14:106259853-106259854 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
30 | rs149247867 | chr14:106259854-106259855 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
31 | rs565296663 | chr14:106259914-106259915 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
32 | rs147366311 | chr14:106259928-106259929 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
33 | rs543854384 | chr14:106259992-106259993 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
34 | rs181836580 | chr14:106260018-106260019 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
35 | rs577404761 | chr14:106260021-106260022 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
36 | rs75048221 | chr14:106260032-106260033 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
37 | rs557605975 | chr14:106260047-106260048 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
38 | rs571226416 | chr14:106260073-106260074 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
39 | rs560165120 | chr14:106260156-106260157 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
40 | rs527718711 | chr14:106260187-106260188 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
41 | rs186449495 | chr14:106260226-106260227 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs561238398 | chr14:106260228-106260229 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs371409933 | chr14:106260242-106260243 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs188913624 | chr14:106260256-106260257 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs77269068 | chr14:106260258-106260259 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs531845769 | chr14:106260303-106260304 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs550258997 | chr14:106260308-106260309 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs571910353 | chr14:106260312-106260313 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs538855265 | chr14:106260331-106260332 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs181711775 | chr14:106260339-106260340 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Breast cancer | 17899364 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Wilms tumour | 21544195 | CNVD |
Lung cancer | 18438408 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Malignant mesothelioma | 18160781 | CNVD |
Pleural malignant mesothelioma | 18160781 | CNVD |
Neuroblastoma | 18923191 | CNVD |
cataract | 16735990 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Developmental delay | 21147756 | CNVD |
Cancer | 20164920 | CNVD |
Chronic lymphocytic leukemia | 20421269 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Biliary cancer | 19435499 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Acute lymphoblastic leukemia | 20139093 | CNVD |
Hepatocellular carcinoma | 16750200 | CNVD |
Primary mediastinal b-cell lymphoma | 17728785 | CNVD |
Glioblastoma multiforme | 21922591 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Non-small cell lung cancer | 18320023 | CNVD |
Melanoma | 17363583 | CNVD |
Congenital heart defect | 22367666 | CNVD |
Developmental delay | 22367666 | CNVD |
Genitourinary abnormalities | 22367666 | CNVD |
Intellectual disability | 22367666 | CNVD |
Microcephaly | 22367666 | CNVD |
Muscularhypotonia | 22367666 | CNVD |
Ocular coloboma | 22367666 | CNVD |
Teratozoospermia | 22367666 | CNVD |
Cervical cancer | 21062161 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 21990379 | CNVD |
Breast cancer | 16417655 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
Cancer | 21129771 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
Schizophrenia | 21399695 | CNVD |
Intracranial ependymoma | 16609018 | CNVD |
Lung adenocarcinoma | 17086460 | CNVD |
Gastric adenocarcinoma | 19115996 | CNVD |
Acute lymphoblastic leukemia | 21098271 | CNVD |
14q deletion syndrome | 22511897 | CNVD |
Epilepsy | 22083797 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Cancer | 17440070 | CNVD |
Neurocytoma | 17123091 | CNVD |
Esophageal squamous carcinoma | 18405350 | CNVD |
Central neurocytomas | 17123091 | CNVD |
Acute lymphoblastic leukemia | 17315016 | CNVD |
Lung cancer | 17086460 | CNVD |
small cell lung cancer | 17426248 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Williams Syndrome | 20824207 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Cancer | 20164919 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 23813976 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Non-syndromic sensorineural hearing loss | 21987784 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:106251800-106253200 | Enhancers | Primary B cells from peripheral blood | blood |
2 | chr14:106259200-106259800 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
3 | chr14:106259600-106260800 | Enhancers | Primary B cells from peripheral blood | blood |
4 | chr14:106259600-106261000 | Enhancers | Primary B cells from cord blood | blood |
5 | chr14:106259800-106260400 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
6 | chr14:106259800-106260600 | Enhancers | Primary hematopoietic stem cells | blood |
7 | chr14:106259800-106260600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
8 | chr14:106260000-106260400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
9 | chr14:106260400-106263000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
10 | chr14:106263000-106263600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
11 | chr14:106263200-106263600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
12 | chr14:106269800-106270200 | Enhancers | Primary B cells from peripheral blood | blood |
13 | chr14:106272600-106273200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
14 | chr14:106276200-106277000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
15 | chr14:106281200-106284600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
16 | chr14:106281200-106285800 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
17 | chr14:106281600-106288200 | Enhancers | Primary hematopoietic stem cells | blood |
18 | chr14:106281800-106288800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
19 | chr14:106282000-106284800 | Enhancers | Primary B cells from peripheral blood | blood |
20 | chr14:106282000-106288200 | Enhancers | Primary hematopoietic stem cells short term culture | blood |
21 | chr14:106282600-106282800 | Enhancers | Primary B cells from cord blood | blood |
22 | chr14:106282800-106283400 | Weak transcription | Primary B cells from cord blood | blood |
23 | chr14:106283400-106288400 | Enhancers | Primary B cells from cord blood | blood |
24 | chr14:106284000-106285800 | Enhancers | GM12878-XiMat | blood |
25 | chr14:106284000-106286800 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
26 | chr14:106284600-106285000 | Enhancers | Primary monocytes fromperipheralblood | blood |
27 | chr14:106284600-106285400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
28 | chr14:106284800-106285400 | Flanking Active TSS | Primary B cells from peripheral blood | blood |
29 | chr14:106285400-106287200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
30 | chr14:106285400-106288200 | Enhancers | Primary B cells from peripheral blood | blood |
31 | chr14:106287200-106287400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
32 | chr14:106287400-106287600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
33 | chr14:106287600-106287800 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
34 | chr14:106287800-106290400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
35 | chr14:106288200-106289400 | Weak transcription | Primary B cells from peripheral blood | blood |
36 | chr14:106288800-106289200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
37 | chr14:106289200-106290400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
38 | chr14:106289400-106289600 | Enhancers | Primary B cells from peripheral blood | blood |
39 | chr14:106296200-106297000 | Weak transcription | Primary B cells from cord blood | blood |
40 | chr14:106296400-106297200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
41 | chr14:106296400-106297600 | Enhancers | Primary B cells from peripheral blood | blood |
42 | chr14:106296600-106297000 | Enhancers | Fetal Thymus | thymus |
43 | chr14:106296800-106297600 | Enhancers | Thymus | Thymus |
44 | chr14:106297000-106297400 | Strong transcription | Primary B cells from cord blood | blood |
45 | chr14:106297200-106304400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
46 | chr14:106297400-106304400 | Weak transcription | Primary B cells from cord blood | blood |
47 | chr14:106297600-106301200 | Weak transcription | Primary B cells from peripheral blood | blood |
48 | chr14:106299800-106309800 | Weak transcription | Primary hematopoietic stem cells | blood |
49 | chr14:106301000-106303800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
50 | chr14:106301000-106306000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |